RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 SH3YL1Q96HL8 342 aaPredicted RBP16.39■□□□□ 0.21
LINC00554-201ENST00000564841 MROQ9BYG7 248 aa16.39■□□□□ 0.21
LINC00554-201ENST00000564841 KPNA7A9QM74 516 aa16.39■□□□□ 0.21
LINC00554-201ENST00000564841 OGTO15294 1046 aa16.39■□□□□ 0.21
LINC00554-201ENST00000564841 TNNC2P02585 160 aa16.39■□□□□ 0.21
LINC00554-201ENST00000564841 SMPD1P17405 629 aa16.39■□□□□ 0.21
LINC00554-201ENST00000564841 EEF1DP29692 281 aaKnown RBP16.39■□□□□ 0.21
LINC00554-201ENST00000564841 ALDH4A1P30038 563 aa16.39■□□□□ 0.21
LINC00554-201ENST00000564841 PRPSAP1Q14558 356 aa16.39■□□□□ 0.21
LINC00554-201ENST00000564841 PLPPR4Q7Z2D5 763 aa16.39■□□□□ 0.21
LINC00554-201ENST00000564841 TP53INP2Q8IXH6 220 aa16.39■□□□□ 0.21
LINC00554-201ENST00000564841 CNTD1Q8N815 330 aa16.39■□□□□ 0.21
LINC00554-201ENST00000564841 C1orf127Q8N9H9 656 aa16.39■□□□□ 0.21
LINC00554-201ENST00000564841 COLGALT1Q8NBJ5 622 aa16.39■□□□□ 0.21
LINC00554-201ENST00000564841 OR6J1Q8NGC5 347 aa16.39■□□□□ 0.21
LINC00554-201ENST00000564841 NPLOC4Q8TAT6 608 aa16.39■□□□□ 0.21
LINC00554-201ENST00000564841 KCTD4Q8WVF5 259 aa16.39■□□□□ 0.21
LINC00554-201ENST00000564841 MFSD3Q96ES6 412 aa16.39■□□□□ 0.21
LINC00554-201ENST00000564841 ANKRD36BP1Q96IX9 119 aa16.39■□□□□ 0.21
LINC00554-201ENST00000564841 APOL2Q9BQE5 337 aa16.39■□□□□ 0.21
LINC00554-201ENST00000564841 SLC30A1Q9Y6M5 507 aa16.39■□□□□ 0.21
LINC00554-201ENST00000564841 LACTBL1A8MY62 500 aa16.38■□□□□ 0.21
LINC00554-201ENST00000564841 RFTN1Q14699 578 aaPredicted RBP16.38■□□□□ 0.21
LINC00554-201ENST00000564841 ZNF792Q3KQV3 632 aa16.38■□□□□ 0.21
LINC00554-201ENST00000564841 CCDC14Q49A88 953 aa16.38■□□□□ 0.21
LINC00554-201ENST00000564841 JADE1Q6IE81 842 aa16.38■□□□□ 0.21
LINC00554-201ENST00000564841 FAM183BPQ6ZVS7 135 aa16.38■□□□□ 0.21
LINC00554-201ENST00000564841 TMEM151AQ8N4L1 468 aa16.38■□□□□ 0.21
LINC00554-201ENST00000564841 SHCBP1Q8NEM2 672 aa16.38■□□□□ 0.21
LINC00554-201ENST00000564841 TNIP2Q8NFZ5 429 aa16.38■□□□□ 0.21
LINC00554-201ENST00000564841 NDRG1Q92597 394 aaKnown RBP16.38■□□□□ 0.21
LINC00554-201ENST00000564841 PBXIP1Q96AQ6 731 aa16.38■□□□□ 0.21
LINC00554-201ENST00000564841 DGCR6LQ9BY27 220 aa16.38■□□□□ 0.21
LINC00554-201ENST00000564841 MARCH7Q9H992 704 aa16.38■□□□□ 0.21
LINC00554-201ENST00000564841 GTSE1Q9NYZ3 720 aa16.38■□□□□ 0.21
LINC00554-201ENST00000564841 WARS2Q9UGM6 360 aaKnown RBP16.38■□□□□ 0.21
LINC00554-201ENST00000564841 C2CD4BA6NLJ0 364 aa16.38■□□□□ 0.21
LINC00554-201ENST00000564841 TMEM114B3SHH9 223 aa16.38■□□□□ 0.21
LINC00554-201ENST00000564841 SDHDO14521 159 aa16.38■□□□□ 0.21
LINC00554-201ENST00000564841 BMP2P12643 396 aa16.38■□□□□ 0.21
LINC00554-201ENST00000564841 MAGP20916 626 aa16.38■□□□□ 0.21
LINC00554-201ENST00000564841 LSM3P62310 102 aaKnown RBP16.38■□□□□ 0.21
LINC00554-201ENST00000564841 CAMK1DQ8IU85 385 aa16.38■□□□□ 0.21
LINC00554-201ENST00000564841 C7orf31Q8N865 590 aa16.38■□□□□ 0.21
LINC00554-201ENST00000564841 OR52K1Q8NGK4 314 aa16.38■□□□□ 0.21
LINC00554-201ENST00000564841 OR13F1Q8NGS4 319 aa16.38■□□□□ 0.21
LINC00554-201ENST00000564841 CTRCQ99895 268 aa16.38■□□□□ 0.21
LINC00554-201ENST00000564841 C1orf50Q9BV19 199 aa16.38■□□□□ 0.21
LINC00554-201ENST00000564841 TMEM134Q9H6X4 195 aa16.38■□□□□ 0.21
LINC00554-201ENST00000564841 FBRSL1Q9HCM7 1045 aaKnown RBP16.38■□□□□ 0.21
LINC00554-201ENST00000564841 CD300AQ9UGN4 299 aa16.38■□□□□ 0.21
LINC00554-201ENST00000564841 ANKRD34BA5PLL1 514 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 AURKAO14965 403 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 TPSB2P20231 275 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 PSMB4P28070 264 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 ZNF157P51786 506 aaPredicted RBP16.37■□□□□ 0.21
LINC00554-201ENST00000564841 LAMC2Q13753 1193 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 ACAP2Q15057 778 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 TPSAB1Q15661 275 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 HEATR6Q6AI08 1181 aaKnown RBP16.37■□□□□ 0.21
LINC00554-201ENST00000564841 PYROXD2Q8N2H3 581 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 CLEC4CQ8WTT0 213 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 UHRF1Q96T88 793 aaPredicted RBP16.37■□□□□ 0.21
LINC00554-201ENST00000564841 RBBP8Q99708 897 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 CDT1Q9H211 546 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 SPAG4Q9NPE6 437 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 CHRAC1Q9NRG0 131 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 TMPRSS4Q9NRS4 437 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 PTBP2Q9UKA9 531 aaKnown RBP16.37■□□□□ 0.21
LINC00554-201ENST00000564841 CPSF3Q9UKF6 684 aaKnown RBP16.37■□□□□ 0.21
LINC00554-201ENST00000564841 ERVK-11Q9UQG0 969 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 GCATO75600 419 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 C22orf31O95567 290 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 MTHFD1P11586 935 aaKnown RBP16.37■□□□□ 0.21
LINC00554-201ENST00000564841 NAT1P18440 290 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 CHRM3P20309 590 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 FASTKQ14296 549 aaKnown RBP16.37■□□□□ 0.21
LINC00554-201ENST00000564841 CAPRIN1Q14444 709 aaKnown RBP16.37■□□□□ 0.21
LINC00554-201ENST00000564841 CCL14Q16627 93 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 SPRYD7Q5W111 196 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 TBPL2Q6SJ96 375 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 ABRAXAS1Q6UWZ7 409 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 IFNEQ86WN2 208 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 KDM1BQ8NB78 822 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 MCRS1Q96EZ8 462 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 CNPY3Q9BT09 278 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 EFHD1Q9BUP0 239 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 TDRD1Q9BXT4 1180 aaKnown RBP16.37■□□□□ 0.21
LINC00554-201ENST00000564841 TRIM64A6NGJ6 449 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 TRIM64BA6NI03 449 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 GUCY1B2O75343 617 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 PGAM1P18669 254 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 TSPAN8P19075 237 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 PRKAA2P54646 552 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 PTPN11Q06124 597 aaPredicted RBP16.37■□□□□ 0.21
LINC00554-201ENST00000564841 SLC13A2Q13183 592 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 SEMA5AQ13591 1074 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 CYBRD1Q53TN4 286 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 OTUD3Q5T2D3 398 aaPredicted RBP16.37■□□□□ 0.21
LINC00554-201ENST00000564841 CNSTQ6PJW8 725 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms