RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 CCDC13Q8IYE1 715 aa13.77□□□□□ -0.21
CNOT1-206ENST00000564557 PQLC3Q8N755 202 aa13.77□□□□□ -0.21
CNOT1-206ENST00000564557 OR13H1Q8NG92 308 aa13.77□□□□□ -0.21
CNOT1-206ENST00000564557 SHROOM3Q8TF72 1996 aa13.77□□□□□ -0.21
CNOT1-206ENST00000564557 TMEM131Q92545 1883 aa13.77□□□□□ -0.21
CNOT1-206ENST00000564557 TSGA13Q96PP4 275 aa13.77□□□□□ -0.21
CNOT1-206ENST00000564557 MGME1Q9BQP7 344 aa13.77□□□□□ -0.21
CNOT1-206ENST00000564557 POLR1EQ9GZS1 481 aaKnown RBP13.77□□□□□ -0.21
CNOT1-206ENST00000564557 PCOLCE2Q9UKZ9 415 aa13.77□□□□□ -0.21
CNOT1-206ENST00000564557 APOBEC2Q9Y235 224 aaKnown RBP13.77□□□□□ -0.21
CNOT1-206ENST00000564557 PCDHGC4Q9Y5F7 938 aa13.77□□□□□ -0.21
CNOT1-206ENST00000564557 PCNX2A6NKB5 2137 aa13.76□□□□□ -0.21
CNOT1-206ENST00000564557 TTC24A2A3L6 582 aaPredicted RBP13.76□□□□□ -0.21
CNOT1-206ENST00000564557 PPP1R12AO14974 1030 aaPredicted RBP13.76□□□□□ -0.21
CNOT1-206ENST00000564557 ZRANB2O95218 330 aaKnown RBP eCLIP13.76□□□□□ -0.21
CNOT1-206ENST00000564557 TRIM16O95361 564 aa13.76□□□□□ -0.21
CNOT1-206ENST00000564557 PEX11BO96011 259 aa13.76□□□□□ -0.21
CNOT1-206ENST00000564557 ELFN1P0C7U0 828 aa13.76□□□□□ -0.21
CNOT1-206ENST00000564557 CYP2A6P11509 494 aaPredicted RBP13.76□□□□□ -0.21
CNOT1-206ENST00000564557 CCNB1P14635 433 aa13.76□□□□□ -0.21
CNOT1-206ENST00000564557 CA4P22748 312 aa13.76□□□□□ -0.21
CNOT1-206ENST00000564557 CETN2P41208 172 aa13.76□□□□□ -0.21
CNOT1-206ENST00000564557 RXRGP48443 463 aa13.76□□□□□ -0.21
CNOT1-206ENST00000564557 DYNLT1P63172 113 aa13.76□□□□□ -0.21
CNOT1-206ENST00000564557 GBE1Q04446 702 aa13.76□□□□□ -0.21
CNOT1-206ENST00000564557 AP1B1Q10567 949 aa13.76□□□□□ -0.21
CNOT1-206ENST00000564557 PTK2BQ14289 1009 aa13.76□□□□□ -0.21
CNOT1-206ENST00000564557 FGL2Q14314 439 aa13.76□□□□□ -0.21
CNOT1-206ENST00000564557 PDK1Q15118 436 aa13.76□□□□□ -0.21
CNOT1-206ENST00000564557 ARMC12Q5T9G4 340 aa13.76□□□□□ -0.21
CNOT1-206ENST00000564557 KYAT3Q6YP21 454 aaKnown RBP13.76□□□□□ -0.21
CNOT1-206ENST00000564557 DBX2Q6ZNG2 339 aa13.76□□□□□ -0.21
CNOT1-206ENST00000564557 GCNT7Q6ZNI0 430 aa13.76□□□□□ -0.21
CNOT1-206ENST00000564557 ABI3BPQ7Z7G0 1075 aa13.76□□□□□ -0.21
CNOT1-206ENST00000564557 SPATS2Q86XZ4 545 aaKnown RBP13.76□□□□□ -0.21
CNOT1-206ENST00000564557 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.76□□□□□ -0.21
CNOT1-206ENST00000564557 SEMA3CQ99985 751 aa13.76□□□□□ -0.21
CNOT1-206ENST00000564557 NOD2Q9HC29 1040 aa13.76□□□□□ -0.21
CNOT1-206ENST00000564557 DNAJC28Q9NX36 388 aa13.76□□□□□ -0.21
CNOT1-206ENST00000564557 DTLQ9NZJ0 730 aa13.76□□□□□ -0.21
CNOT1-206ENST00000564557 FTSJ1Q9UET6 329 aa13.76□□□□□ -0.21
CNOT1-206ENST00000564557 AMACRQ9UHK6 382 aa13.76□□□□□ -0.21
CNOT1-206ENST00000564557 ANGPTL2Q9UKU9 493 aa13.76□□□□□ -0.21
CNOT1-206ENST00000564557 TFR2Q9UP52 801 aa13.76□□□□□ -0.21
CNOT1-206ENST00000564557 CABIN1Q9Y6J0 2220 aa13.75□□□□□ -0.21
CNOT1-206ENST00000564557 POM121BA6NF01 834 aa13.75□□□□□ -0.21
CNOT1-206ENST00000564557 GOLGA8CPA6NN73 597 aa13.75□□□□□ -0.21
CNOT1-206ENST00000564557 H3BM21 787 aa13.75□□□□□ -0.21
CNOT1-206ENST00000564557 RAD51BO15315 384 aa13.75□□□□□ -0.21
CNOT1-206ENST00000564557 CPP00450 1065 aa13.75□□□□□ -0.21
CNOT1-206ENST00000564557 PRKCGP05129 697 aa13.75□□□□□ -0.21
CNOT1-206ENST00000564557 C6P13671 934 aa13.75□□□□□ -0.21
CNOT1-206ENST00000564557 FECHP22830 423 aa13.75□□□□□ -0.21
CNOT1-206ENST00000564557 EPHA8P29322 1005 aaPredicted RBP13.75□□□□□ -0.21
CNOT1-206ENST00000564557 LIG3P49916 1009 aa13.75□□□□□ -0.21
CNOT1-206ENST00000564557 VAV2P52735 878 aa13.75□□□□□ -0.21
CNOT1-206ENST00000564557 EPHB1P54762 984 aa13.75□□□□□ -0.21
CNOT1-206ENST00000564557 KIF5AQ12840 1032 aa13.75□□□□□ -0.21
CNOT1-206ENST00000564557 PDE1CQ14123 709 aaPredicted RBP13.75□□□□□ -0.21
CNOT1-206ENST00000564557 LRRC14Q15048 493 aa13.75□□□□□ -0.21
CNOT1-206ENST00000564557 CCDC181Q5TID7 509 aa13.75□□□□□ -0.21
CNOT1-206ENST00000564557 KAZNQ674X7 775 aa13.75□□□□□ -0.21
CNOT1-206ENST00000564557 C11orf63Q6NUN7 778 aa13.75□□□□□ -0.21
CNOT1-206ENST00000564557 MFSD7Q6UXD7 560 aa13.75□□□□□ -0.21
CNOT1-206ENST00000564557 RAD9BQ6WBX8 426 aa13.75□□□□□ -0.21
CNOT1-206ENST00000564557 RCOR2Q8IZ40 523 aa13.75□□□□□ -0.21
CNOT1-206ENST00000564557 PGBD5Q8N414 524 aa13.75□□□□□ -0.21
CNOT1-206ENST00000564557 TEX26Q8N6G2 289 aa13.75□□□□□ -0.21
CNOT1-206ENST00000564557 EID2Q8N6I1 236 aa13.75□□□□□ -0.21
CNOT1-206ENST00000564557 TPCN2Q8NHX9 752 aa13.75□□□□□ -0.21
CNOT1-206ENST00000564557 SAP25Q8TEE9 199 aa13.75□□□□□ -0.21
CNOT1-206ENST00000564557 MAML1Q92585 1016 aa13.75□□□□□ -0.21
CNOT1-206ENST00000564557 VOPP1Q96AW1 172 aa13.75□□□□□ -0.21
CNOT1-206ENST00000564557 HDAC11Q96DB2 347 aa13.75□□□□□ -0.21
CNOT1-206ENST00000564557 ECHDC3Q96DC8 303 aa13.75□□□□□ -0.21
CNOT1-206ENST00000564557 RBM41Q96IZ5 413 aaKnown RBP13.75□□□□□ -0.21
CNOT1-206ENST00000564557 BMFQ96LC9 184 aa13.75□□□□□ -0.21
CNOT1-206ENST00000564557 BRD8Q9H0E9 1235 aa13.75□□□□□ -0.21
CNOT1-206ENST00000564557 PHTF1Q9UMS5 762 aa13.75□□□□□ -0.21
CNOT1-206ENST00000564557 COQ6Q9Y2Z9 468 aa13.75□□□□□ -0.21
CNOT1-206ENST00000564557 PCDHGA4Q9Y5G9 962 aa13.75□□□□□ -0.21
CNOT1-206ENST00000564557 SPTBN2O15020 2390 aa13.74□□□□□ -0.21
CNOT1-206ENST00000564557 DCHS1Q96JQ0 3298 aa13.74□□□□□ -0.21
CNOT1-206ENST00000564557 CFAP69A5D8W1 941 aa13.74□□□□□ -0.21
CNOT1-206ENST00000564557 NEMP2A6NFY4 417 aa13.74□□□□□ -0.21
CNOT1-206ENST00000564557 A8MX80 341 aa13.74□□□□□ -0.21
CNOT1-206ENST00000564557 TRAFD1O14545 582 aaPredicted RBP13.74□□□□□ -0.21
CNOT1-206ENST00000564557 TOR1BO14657 336 aa13.74□□□□□ -0.21
CNOT1-206ENST00000564557 SPINT1O43278 529 aa13.74□□□□□ -0.21
CNOT1-206ENST00000564557 SDC3O75056 442 aa13.74□□□□□ -0.21
CNOT1-206ENST00000564557 JCHAINP01591 159 aa13.74□□□□□ -0.21
CNOT1-206ENST00000564557 CR2P20023 1033 aa13.74□□□□□ -0.21
CNOT1-206ENST00000564557 MMP12P39900 470 aa13.74□□□□□ -0.21
CNOT1-206ENST00000564557 NR2C2P49116 596 aa13.74□□□□□ -0.21
CNOT1-206ENST00000564557 GSDMDP57764 484 aa13.74□□□□□ -0.21
CNOT1-206ENST00000564557 HNRNPKP61978 463 aaKnown RBP eCLIP13.74□□□□□ -0.21
CNOT1-206ENST00000564557 YPEL5P62699 121 aa13.74□□□□□ -0.21
CNOT1-206ENST00000564557 SEMG2Q02383 582 aa13.74□□□□□ -0.21
CNOT1-206ENST00000564557 SLC10A2Q12908 348 aaPredicted RBP13.74□□□□□ -0.21
CNOT1-206ENST00000564557 BNIP3Q12983 259 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms