RNA–Protein interactions for RNA: ENST00000563318.1

FANCA-210, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-210ENST00000563318 ALG3Q92685 438 aa12.39□□□□□ -0.43
FANCA-210ENST00000563318 FEM1CQ96JP0 617 aa12.39□□□□□ -0.43
FANCA-210ENST00000563318 MCCC1Q96RQ3 725 aaPredicted RBP12.39□□□□□ -0.43
FANCA-210ENST00000563318 LGMNQ99538 433 aa12.39□□□□□ -0.43
FANCA-210ENST00000563318 GTPBP2Q9BX10 602 aaKnown RBP12.39□□□□□ -0.43
FANCA-210ENST00000563318 SLC17A9Q9BYT1 436 aa12.39□□□□□ -0.43
FANCA-210ENST00000563318 GAREM1Q9H706 876 aa12.39□□□□□ -0.43
FANCA-210ENST00000563318 FZD3Q9NPG1 666 aa12.39□□□□□ -0.43
FANCA-210ENST00000563318 PCDH12Q9NPG4 1184 aa12.39□□□□□ -0.43
FANCA-210ENST00000563318 WASF3Q9UPY6 502 aa12.39□□□□□ -0.43
FANCA-210ENST00000563318 PCDHA3Q9Y5H8 950 aa12.39□□□□□ -0.43
FANCA-210ENST00000563318 HS3ST3A1Q9Y663 406 aa12.39□□□□□ -0.43
FANCA-210ENST00000563318 CHD8Q9HCK8 2581 aa12.39□□□□□ -0.43
FANCA-210ENST00000563318 FREM2Q5SZK8 3169 aa12.38□□□□□ -0.43
FANCA-210ENST00000563318 AKAP13Q12802 2813 aa12.38□□□□□ -0.43
FANCA-210ENST00000563318 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.38□□□□□ -0.43
FANCA-210ENST00000563318 MED19A0JLT2 244 aaPredicted RBP12.38□□□□□ -0.43
FANCA-210ENST00000563318 CFAP69A5D8W1 941 aa12.38□□□□□ -0.43
FANCA-210ENST00000563318 POM121BA6NF01 834 aa12.38□□□□□ -0.43
FANCA-210ENST00000563318 IGLON5A6NGN9 336 aa12.38□□□□□ -0.43
FANCA-210ENST00000563318 GIPC1O14908 333 aa12.38□□□□□ -0.43
FANCA-210ENST00000563318 SLC31A1O15431 190 aa12.38□□□□□ -0.43
FANCA-210ENST00000563318 OPHN1O60890 802 aa12.38□□□□□ -0.43
FANCA-210ENST00000563318 DKK1O94907 266 aa12.38□□□□□ -0.43
FANCA-210ENST00000563318 PRLP01236 227 aa12.38□□□□□ -0.43
FANCA-210ENST00000563318 HLA-DQB2P05538 268 aa12.38□□□□□ -0.43
FANCA-210ENST00000563318 PECAM1P16284 738 aaPredicted RBP12.38□□□□□ -0.43
FANCA-210ENST00000563318 SCNN1BP51168 640 aa12.38□□□□□ -0.43
FANCA-210ENST00000563318 PFN3P60673 137 aa12.38□□□□□ -0.43
FANCA-210ENST00000563318 MAXP61244 160 aa12.38□□□□□ -0.43
FANCA-210ENST00000563318 CCZ1BP86790 482 aa12.38□□□□□ -0.43
FANCA-210ENST00000563318 CCZ1P86791 482 aaPredicted RBP12.38□□□□□ -0.43
FANCA-210ENST00000563318 BCL2L1Q07817 233 aa12.38□□□□□ -0.43
FANCA-210ENST00000563318 NIPAL4Q0D2K0 466 aa12.38□□□□□ -0.43
FANCA-210ENST00000563318 ZNF235Q14590 738 aa12.38□□□□□ -0.43
FANCA-210ENST00000563318 PRKD1Q15139 912 aaPredicted RBP12.38□□□□□ -0.43
FANCA-210ENST00000563318 TPRG1LQ5T0D9 272 aa12.38□□□□□ -0.43
FANCA-210ENST00000563318 TIGD7Q6NT04 549 aaPredicted RBP12.38□□□□□ -0.43
FANCA-210ENST00000563318 DPPA4Q7L190 304 aa12.38□□□□□ -0.43
FANCA-210ENST00000563318 DAAM2Q86T65 1068 aa12.38□□□□□ -0.43
FANCA-210ENST00000563318 TTC7BQ86TV6 843 aa12.38□□□□□ -0.43
FANCA-210ENST00000563318 CCDC13Q8IYE1 715 aa12.38□□□□□ -0.43
FANCA-210ENST00000563318 TP53I13Q8NBR0 393 aaPredicted RBP12.38□□□□□ -0.43
FANCA-210ENST00000563318 PIH1D2Q8WWB5 315 aa12.38□□□□□ -0.43
FANCA-210ENST00000563318 KLK6Q92876 244 aa12.38□□□□□ -0.43
FANCA-210ENST00000563318 ELF4Q99607 663 aaPredicted RBP12.38□□□□□ -0.43
FANCA-210ENST00000563318 EFR3BQ9Y2G0 817 aa12.38□□□□□ -0.43
FANCA-210ENST00000563318 TRPM6Q9BX84 2022 aa12.38□□□□□ -0.43
FANCA-210ENST00000563318 TMEM131Q92545 1883 aa12.38□□□□□ -0.43
FANCA-210ENST00000563318 TP53BP1Q12888 1972 aaPredicted RBP12.38□□□□□ -0.43
FANCA-210ENST00000563318 BPTFQ12830 3046 aa12.37□□□□□ -0.43
FANCA-210ENST00000563318 PCNX2A6NKB5 2137 aa12.37□□□□□ -0.43
FANCA-210ENST00000563318 APOL1O14791 398 aa12.37□□□□□ -0.43
FANCA-210ENST00000563318 PCDH8O95206 1070 aa12.37□□□□□ -0.43
FANCA-210ENST00000563318 PGLSO95336 258 aa12.37□□□□□ -0.43
FANCA-210ENST00000563318 PAK4O96013 591 aaPredicted RBP12.37□□□□□ -0.43
FANCA-210ENST00000563318 KRT10P13645 584 aa12.37□□□□□ -0.43
FANCA-210ENST00000563318 CEACAM1P13688 526 aa12.37□□□□□ -0.43
FANCA-210ENST00000563318 CCNB1P14635 433 aa12.37□□□□□ -0.43
FANCA-210ENST00000563318 ZFXP17010 805 aaPredicted RBP12.37□□□□□ -0.43
FANCA-210ENST00000563318 IGFALSP35858 605 aa12.37□□□□□ -0.43
FANCA-210ENST00000563318 NR2C2P49116 596 aa12.37□□□□□ -0.43
FANCA-210ENST00000563318 FAM193AP78312 1265 aa12.37□□□□□ -0.43
FANCA-210ENST00000563318 ELP6Q0PNE2 266 aa12.37□□□□□ -0.43
FANCA-210ENST00000563318 TFDP3Q5H9I0 405 aa12.37□□□□□ -0.43
FANCA-210ENST00000563318 PPM1JQ5JR12 505 aa12.37□□□□□ -0.43
FANCA-210ENST00000563318 KDM7AQ6ZMT4 941 aa12.37□□□□□ -0.43
FANCA-210ENST00000563318 ZNF662Q6ZS27 426 aa12.37□□□□□ -0.43
FANCA-210ENST00000563318 BBS12Q6ZW61 710 aa12.37□□□□□ -0.43
FANCA-210ENST00000563318 RCOR2Q8IZ40 523 aa12.37□□□□□ -0.43
FANCA-210ENST00000563318 OR13H1Q8NG92 308 aa12.37□□□□□ -0.43
FANCA-210ENST00000563318 FAM174AQ8TBP5 190 aa12.37□□□□□ -0.43
FANCA-210ENST00000563318 SAP25Q8TEE9 199 aa12.37□□□□□ -0.43
FANCA-210ENST00000563318 POLR1EQ9GZS1 481 aaKnown RBP12.37□□□□□ -0.43
FANCA-210ENST00000563318 BRD8Q9H0E9 1235 aa12.37□□□□□ -0.43
FANCA-210ENST00000563318 NT5MQ9NPB1 228 aa12.37□□□□□ -0.43
FANCA-210ENST00000563318 AASDHPPTQ9NRN7 309 aa12.37□□□□□ -0.43
FANCA-210ENST00000563318 TM7SF3Q9NS93 570 aa12.37□□□□□ -0.43
FANCA-210ENST00000563318 SAE1Q9UBE0 346 aaPredicted RBP12.37□□□□□ -0.43
FANCA-210ENST00000563318 PCOLCE2Q9UKZ9 415 aa12.37□□□□□ -0.43
FANCA-210ENST00000563318 PNMA8BQ9ULN7 279 aaPredicted RBP12.37□□□□□ -0.43
FANCA-210ENST00000563318 PCDHGC4Q9Y5F7 938 aa12.37□□□□□ -0.43
FANCA-210ENST00000563318 CAPN6Q9Y6Q1 641 aa12.37□□□□□ -0.43
FANCA-210ENST00000563318 A0A1W2PQ67 120 aa12.36□□□□□ -0.43
FANCA-210ENST00000563318 CCDC66A2RUB6 948 aa12.36□□□□□ -0.43
FANCA-210ENST00000563318 KCNK1O00180 336 aa12.36□□□□□ -0.43
FANCA-210ENST00000563318 KCNK3O14649 394 aa12.36□□□□□ -0.43
FANCA-210ENST00000563318 DDX3YO15523 660 aaKnown RBP12.36□□□□□ -0.43
FANCA-210ENST00000563318 ARHGAP6O43182 974 aa12.36□□□□□ -0.43
FANCA-210ENST00000563318 DFNA5O60443 496 aa12.36□□□□□ -0.43
FANCA-210ENST00000563318 CST8O60676 142 aa12.36□□□□□ -0.43
FANCA-210ENST00000563318 MMP20O60882 483 aa12.36□□□□□ -0.43
FANCA-210ENST00000563318 ZRANB2O95218 330 aaKnown RBP eCLIP12.36□□□□□ -0.43
FANCA-210ENST00000563318 IPO7O95373 1038 aaKnown RBP12.36□□□□□ -0.43
FANCA-210ENST00000563318 PRKCGP05129 697 aa12.36□□□□□ -0.43
FANCA-210ENST00000563318 PDHA1P08559 390 aa12.36□□□□□ -0.43
FANCA-210ENST00000563318 GIMD1P0DJR0 217 aa12.36□□□□□ -0.43
FANCA-210ENST00000563318 C6P13671 934 aa12.36□□□□□ -0.43
FANCA-210ENST00000563318 TGM2P21980 687 aa12.36□□□□□ -0.43
FANCA-210ENST00000563318 LHCGRP22888 699 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms