RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 B3GALT1Q9Y5Z6 326 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 SHANK1Q9Y566 2161 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 PKDREJQ9NTG1 2253 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 LOC101059948A0A1B0GTJ6 334 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 GOLGA6L7A0A1B0GV03 622 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 HEATR9A2RTY3 570 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 PRSS44E7EML9 344 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 M0QYT0 321 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 KPNA3O00505 521 aaPredicted RBP5.41□□□□□ -1.54
HERC1-213ENST00000561359 FPGTO14772 594 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 KIAA0391O15091 583 aaKnown RBP5.41□□□□□ -1.54
HERC1-213ENST00000561359 RAD51BO15315 384 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 IRAK2O43187 625 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 MSI1O43347 362 aaKnown RBP5.41□□□□□ -1.54
HERC1-213ENST00000561359 REC8O95072 547 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 LATS1O95835 1130 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 FGF3P11487 239 aaPredicted RBP5.41□□□□□ -1.54
HERC1-213ENST00000561359 GSTT1P30711 240 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 ATICP31939 592 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 NOP2P46087 812 aaKnown RBP5.41□□□□□ -1.54
HERC1-213ENST00000561359 SLC11A2P49281 568 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 IRAK1P51617 712 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 THOP1P52888 689 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 RPS24P62847 133 aaKnown RBP5.41□□□□□ -1.54
HERC1-213ENST00000561359 ARHGEF7Q14155 803 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 ELOCQ15369 112 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 ARHGAP44Q17R89 818 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 FSCBQ5H9T9 825 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 ZNF667Q5HYK9 610 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 TPRG1LQ5T0D9 272 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 PIP5KL1Q5T9C9 394 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 ALG1LQ6GMV1 187 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 PIM3Q86V86 326 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 SLITRK4Q8IW52 837 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 NRSN1Q8IZ57 195 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 APCDD1Q8J025 514 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 NLGN4XQ8N0W4 816 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 CRYBG2Q8N1P7 616 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 RCBTB1Q8NDN9 531 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 NLGN4YQ8NFZ3 816 aaPredicted RBP5.41□□□□□ -1.54
HERC1-213ENST00000561359 RNF139Q8WU17 664 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 RAD54LQ92698 747 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 RNF34Q969K3 372 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 ELMO3Q96BJ8 720 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 CYFIP2Q96F07 1278 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 STRA6Q9BX79 667 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 SLC17A9Q9BYT1 436 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 ASPSCR1Q9BZE9 553 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 CLPBQ9H078 707 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 SDCBP2Q9H190 292 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 XYLT2Q9H1B5 865 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 RDH14Q9HBH5 336 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 SSU72Q9NP77 194 aaKnown RBP5.41□□□□□ -1.54
HERC1-213ENST00000561359 SLAMF7Q9NQ25 335 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 OLA1Q9NTK5 396 aaKnown RBP5.41□□□□□ -1.54
HERC1-213ENST00000561359 SLC39A1Q9NY26 324 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 LUZP4Q9P127 313 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 HMGXB4Q9UGU5 601 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 STOML2Q9UJZ1 356 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 PCDHGA3Q9Y5H0 932 aa5.41□□□□□ -1.54
HERC1-213ENST00000561359 OAS3Q9Y6K5 1087 aaKnown RBP5.41□□□□□ -1.54
HERC1-213ENST00000561359 SCN8AQ9UQD0 1980 aa5.4□□□□□ -1.54
HERC1-213ENST00000561359 JMJD1CQ15652 2540 aa5.4□□□□□ -1.54
HERC1-213ENST00000561359 POLEQ07864 2286 aa5.4□□□□□ -1.54
HERC1-213ENST00000561359 HGSO14964 777 aaPredicted RBP5.4□□□□□ -1.54
HERC1-213ENST00000561359 MCF2LO15068 1137 aa5.4□□□□□ -1.54
HERC1-213ENST00000561359 TMPRSS2O15393 492 aa5.4□□□□□ -1.54
HERC1-213ENST00000561359 SORBS2O94875 1100 aaKnown RBP5.4□□□□□ -1.54
HERC1-213ENST00000561359 ALPIP09923 528 aa5.4□□□□□ -1.54
HERC1-213ENST00000561359 P4HA1P13674 534 aa5.4□□□□□ -1.54
HERC1-213ENST00000561359 CTSEP14091 401 aa5.4□□□□□ -1.54
HERC1-213ENST00000561359 IDEP14735 1019 aa5.4□□□□□ -1.54
HERC1-213ENST00000561359 ARNTP27540 789 aa5.4□□□□□ -1.54
HERC1-213ENST00000561359 CSTF2P33240 577 aaKnown RBP eCLIP5.4□□□□□ -1.54
HERC1-213ENST00000561359 UBA7P41226 1012 aa5.4□□□□□ -1.54
HERC1-213ENST00000561359 TOB1P50616 345 aaPredicted RBP5.4□□□□□ -1.54
HERC1-213ENST00000561359 PGDP52209 483 aa5.4□□□□□ -1.54
HERC1-213ENST00000561359 RNASE9P60153 205 aaKnown RBP5.4□□□□□ -1.54
HERC1-213ENST00000561359 RPS21P63220 83 aaKnown RBP5.4□□□□□ -1.54
HERC1-213ENST00000561359 PPARDQ03181 441 aa5.4□□□□□ -1.54
HERC1-213ENST00000561359 SGCGQ13326 291 aa5.4□□□□□ -1.54
HERC1-213ENST00000561359 BIRC3Q13489 604 aa5.4□□□□□ -1.54
HERC1-213ENST00000561359 ERV3-1Q14264 604 aa5.4□□□□□ -1.54
HERC1-213ENST00000561359 TESK1Q15569 626 aa5.4□□□□□ -1.54
HERC1-213ENST00000561359 AMZ1Q400G9 498 aa5.4□□□□□ -1.54
HERC1-213ENST00000561359 FAM133BQ5BKY9 247 aaKnown RBP5.4□□□□□ -1.54
HERC1-213ENST00000561359 DCAF12Q5T6F0 453 aa5.4□□□□□ -1.54
HERC1-213ENST00000561359 LVRNQ6Q4G3 990 aa5.4□□□□□ -1.54
HERC1-213ENST00000561359 SPRED1Q7Z699 444 aa5.4□□□□□ -1.54
HERC1-213ENST00000561359 FAM129CQ86XR2 697 aa5.4□□□□□ -1.54
HERC1-213ENST00000561359 UNC45BQ8IWX7 931 aa5.4□□□□□ -1.54
HERC1-213ENST00000561359 CFAP52Q8N1V2 620 aa5.4□□□□□ -1.54
HERC1-213ENST00000561359 FSTL5Q8N475 847 aaPredicted RBP5.4□□□□□ -1.54
HERC1-213ENST00000561359 FRS2Q8WU20 508 aa5.4□□□□□ -1.54
HERC1-213ENST00000561359 FEM1CQ96JP0 617 aa5.4□□□□□ -1.54
HERC1-213ENST00000561359 TBATAQ96M53 351 aa5.4□□□□□ -1.54
HERC1-213ENST00000561359 FANCD2OSQ96PS1 177 aa5.4□□□□□ -1.54
HERC1-213ENST00000561359 DDX50Q9BQ39 737 aaKnown RBP5.4□□□□□ -1.54
HERC1-213ENST00000561359 DDA1Q9BW61 102 aa5.4□□□□□ -1.54
HERC1-213ENST00000561359 KIAA1586Q9HCI6 787 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms