RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 GDPD5Q8WTR4 605 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 CLEC4CQ8WTT0 213 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 PSPC1Q8WXF1 523 aaKnown RBP2.08□□□□□ -2.08
RTF1-207ENST00000561076 SEPT1Q8WYJ6 367 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 SNX19Q92543 992 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 SLC9A6Q92581 669 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 CORO2AQ92828 525 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 GATA6Q92908 595 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 IRF7Q92985 503 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 TP53INP1Q96A56 240 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 CHFRQ96EP1 664 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 C5orf30Q96GV9 206 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 ZC3HAV1LQ96H79 300 aaKnown RBP2.08□□□□□ -2.08
RTF1-207ENST00000561076 FBXL20Q96IG2 436 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 GSDMAQ96QA5 445 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 WDR24Q96S15 920 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 HAPLN3Q96S86 360 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 INTS14Q96SY0 518 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 AGAP2Q99490 1192 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 PKP2Q99959 881 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 VKORC1Q9BQB6 163 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 RHOXF2Q9BQY4 288 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 CRACR2AQ9BSW2 395 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 INPP5KQ9BT40 448 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 TBCDQ9BTW9 1192 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 TPSD1Q9BZJ3 242 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 RNF32Q9H0A6 362 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 RAB17Q9H0T7 212 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 SLC6A17Q9H1V8 727 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 MMP27Q9H306 513 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 GOLPH3LQ9H4A5 285 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 ST6GALNAC4Q9H4F1 302 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 C19orf44Q9H6X5 657 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 SUDS3Q9H7L9 328 aaPredicted RBP2.08□□□□□ -2.08
RTF1-207ENST00000561076 SFXN1Q9H9B4 322 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 USP29Q9HBJ7 922 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 GPN1Q9HCN4 374 aaPredicted RBP2.08□□□□□ -2.08
RTF1-207ENST00000561076 IL23AQ9NPF7 189 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 TRIM36Q9NQ86 728 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 CENPMQ9NSP4 180 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 DNAJC17Q9NVM6 304 aaKnown RBP2.08□□□□□ -2.08
RTF1-207ENST00000561076 NMRK1Q9NWW6 199 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 CHCHD3Q9NX63 227 aaKnown RBP2.08□□□□□ -2.08
RTF1-207ENST00000561076 HAO2Q9NYQ3 351 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 NCKIPSDQ9NZQ3 722 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 RAI14Q9P0K7 980 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 ANKMY1Q9P2S6 941 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 COPG2Q9UBF2 871 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 IL17BQ9UHF5 180 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 BAIAP2L1Q9UHR4 511 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 VPS51Q9UID3 782 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 GMEB2Q9UKD1 530 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 CFAP45Q9UL16 551 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 RIMKLBQ9ULI2 386 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 SORCS3Q9UPU3 1222 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 EXO1Q9UQ84 846 aaKnown RBP2.08□□□□□ -2.08
RTF1-207ENST00000561076 ZNF148Q9UQR1 794 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.08□□□□□ -2.08
RTF1-207ENST00000561076 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.08□□□□□ -2.08
RTF1-207ENST00000561076 CLCA3PQ9Y6N3 262 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 UTYO14607 1347 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 COL15A1P39059 1388 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 ATRNL1Q5VV63 1379 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 LOC102723996A0A087X1L8 192 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 TRBV2A0A0J9YWF9 115 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 GXYLT2A0PJZ3 443 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 UBE2QL1A1L167 161 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 EME2A4GXA9 379 aaPredicted RBP2.07□□□□□ -2.08
RTF1-207ENST00000561076 CFAP73A6NFT4 308 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 NPIPB13A6NJU9 1138 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 YDJCA8MPS7 323 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 NPIPB5A8MRT5 1133 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 NPIPB4C9JG80 1138 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 E7ENX8 843 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 PLK4O00444 970 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 BIN1O00499 593 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 TRIM24O15164 1050 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 ADAMDEC1O15204 470 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 OGG1O15527 345 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 HOXA3O43365 443 aaPredicted RBP2.07□□□□□ -2.08
RTF1-207ENST00000561076 BUB1O43683 1085 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 VEGFDO43915 354 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 TMPRSS11DO60235 418 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 CYTIPO60759 359 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 MFAP3LO75121 409 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 USP12O75317 370 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 MTX2O75431 263 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 WBP4O75554 376 aaKnown RBP2.07□□□□□ -2.08
RTF1-207ENST00000561076 CIB2O75838 187 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 IPO13O94829 963 aaKnown RBP2.07□□□□□ -2.08
RTF1-207ENST00000561076 SLCO2B1O94956 709 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 CAMTA2O94983 1202 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 PGLSO95336 258 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 GPANK1O95872 356 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 GH1P01241 217 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 TFP02787 698 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 PCCBP05166 539 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 CYC1P08574 325 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 HOXB5P09067 269 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 FCER1AP12319 257 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms