RNA–Protein interactions for RNA: ENST00000560944.1

CERS3-208, Transcript of ceramide synthase 3, human

TSL 3

Gene CERS3, Length 448 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CERS3-208	ENST00000560944	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.34	□□□□□ -0.59
CERS3-208	ENST00000560944	KCTD3	Q9Y597	815 aa		11.34	□□□□□ -0.59
CERS3-208	ENST00000560944		R4GN57	208 aa		11.34	□□□□□ -0.59
CERS3-208	ENST00000560944		V9GYY5	206 aa	Predicted RBP	11.34	□□□□□ -0.59
CERS3-208	ENST00000560944	CACNA1H	O95180	2353 aa		11.34	□□□□□ -0.59
CERS3-208	ENST00000560944	SCN8A	Q9UQD0	1980 aa		11.34	□□□□□ -0.59
CERS3-208	ENST00000560944	MUC6	Q6W4X9	2439 aa		11.34	□□□□□ -0.59
CERS3-208	ENST00000560944	PLXND1	Q9Y4D7	1925 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	CTAGE15	A4D2H0	777 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	CCL22	O00626	93 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	TP73	O15350	636 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	SOCS5	O75159	536 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	AVIL	O75366	819 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	AP2A1	O95782	977 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	GAS8	O95995	478 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	CTAGE8	P0CG41	777 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	GM2A	P17900	193 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	C5AR1	P21730	350 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	STIP1	P31948	543 aa	Known RBP	11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	HNF1B	P35680	557 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	MMP12	P39900	470 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	NEK3	P51956	506 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	GEM	P55040	296 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	CRADD	P78560	199 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	RAD51	Q06609	339 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	CDK18	Q07002	472 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	PTPRCAP	Q14761	206 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	LPAL2	Q16609	132 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	CFAP58	Q5T655	872 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	ARMC12	Q5T9G4	340 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	RNASEH2B	Q5TBB1	312 aa	Known RBP	11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	IZUMO3	Q5VZ72	239 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	CTAGE6	Q86UF2	777 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	CTAGE4	Q8IX94	777 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	AGGF1	Q8N302	714 aa	eCLIP	11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	MPP5	Q8N3R9	675 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	OR14C36	Q8NHC7	312 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	SLCO2A1	Q92959	643 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	TOE1	Q96GM8	510 aa	Known RBP	11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	FEM1C	Q96JP0	617 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	MYOC	Q99972	504 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	OMD	Q99983	421 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	IER2	Q9BTL4	223 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	GPR174	Q9BXC1	333 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	OSBPL1A	Q9BXW6	950 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	FZD3	Q9NPG1	666 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	DMGDH	Q9UI17	866 aa	Known RBP	11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	ZFR2	Q9UPR6	939 aa	Known RBP	11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	SHOC2	Q9UQ13	582 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	CA5B	Q9Y2D0	317 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	FADS3	Q9Y5Q0	445 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	GPR179	Q6PRD1	2367 aa		11.33	□□□□□ -0.6
CERS3-208	ENST00000560944	PLXNA2	O75051	1894 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	AREL1	O15033	823 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	HR	O43593	1189 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	GALR2	O43603	387 aa	Predicted RBP	11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	MMP20	O60882	483 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	ALDH1A2	O94788	518 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	NDST3	O95803	873 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	C1S	P09871	688 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	RHOXF2B	P0C7M4	288 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	ACADM	P11310	421 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	MAT2A	P31153	395 aa	Known RBP	11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	FDFT1	P37268	417 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	ADCY8	P40145	1251 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	MAPK8	P45983	427 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	LMAN1	P49257	510 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	FAM193A	P78312	1265 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	TCF15	Q12870	199 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	MPP3	Q13368	585 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	FGL2	Q14314	439 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	SLC1A5	Q15758	541 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	CNGA3	Q16281	694 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	UGP2	Q16851	508 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	TTC31	Q49AM3	519 aa	Predicted RBP	11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	CCDC38	Q502W7	563 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	TEX35	Q5T0J7	233 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	CERCAM	Q5T4B2	595 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	FAM46C	Q5VWP2	391 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	C8orf74	Q6P047	294 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	FBXL19	Q6PCT2	694 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	LAYN	Q6UX15	382 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	LYSMD3	Q7Z3D4	306 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	GSPT2	Q8IYD1	628 aa	Known RBP	11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	PELI3	Q8N2H9	469 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	MMGT1	Q8N4V1	131 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	GRK7	Q8WTQ7	553 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	FAM131C	Q96AQ9	280 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	EID2B	Q96D98	161 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	IFT43	Q96FT9	208 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	ZNF641	Q96N77	438 aa	Predicted RBP	11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	FERMT1	Q9BQL6	677 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	RHOXF2	Q9BQY4	288 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	HDAC8	Q9BY41	377 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	FBRS	Q9HAH7	460 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	EBF2	Q9HAK2	575 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	ITM2C	Q9NQX7	267 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	DYRK4	Q9NR20	520 aa		11.32	□□□□□ -0.6
CERS3-208	ENST00000560944	FAM86C1	Q9NVL1	165 aa		11.32	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms