RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 SLC20A2Q08357 652 aa12.71□□□□□ -0.37
SYNM-203ENST00000560674 ZNHIT3Q15649 155 aaPredicted RBP12.71□□□□□ -0.37
SYNM-203ENST00000560674 ATG14Q6ZNE5 492 aa12.71□□□□□ -0.37
SYNM-203ENST00000560674 RNF44Q7L0R7 432 aa12.71□□□□□ -0.37
SYNM-203ENST00000560674 HIST3H2AQ7L7L0 130 aa12.71□□□□□ -0.37
SYNM-203ENST00000560674 AP3S1Q92572 193 aa12.71□□□□□ -0.37
SYNM-203ENST00000560674 HIST1H2ACQ93077 130 aa12.71□□□□□ -0.37
SYNM-203ENST00000560674 SLC47A1Q96FL8 570 aa12.71□□□□□ -0.37
SYNM-203ENST00000560674 ITCHQ96J02 903 aa12.71□□□□□ -0.37
SYNM-203ENST00000560674 LGMNQ99538 433 aa12.71□□□□□ -0.37
SYNM-203ENST00000560674 SEMA3CQ99985 751 aa12.71□□□□□ -0.37
SYNM-203ENST00000560674 RHBGQ9H310 441 aa12.71□□□□□ -0.37
SYNM-203ENST00000560674 BPIFA1Q9NP55 256 aa12.71□□□□□ -0.37
SYNM-203ENST00000560674 RPRD1BQ9NQG5 326 aaKnown RBP12.71□□□□□ -0.37
SYNM-203ENST00000560674 PRR5-ARHGAP8B1AHC4 643 aa12.71□□□□□ -0.37
SYNM-203ENST00000560674 LIN7AO14910 233 aaPredicted RBP12.71□□□□□ -0.37
SYNM-203ENST00000560674 CABYRO75952 493 aa12.71□□□□□ -0.37
SYNM-203ENST00000560674 ZNF24P17028 368 aa12.71□□□□□ -0.37
SYNM-203ENST00000560674 SCNN1GP51170 649 aa12.71□□□□□ -0.37
SYNM-203ENST00000560674 ARHGAP8P85298 464 aa12.71□□□□□ -0.37
SYNM-203ENST00000560674 TRIM32Q13049 653 aa12.71□□□□□ -0.37
SYNM-203ENST00000560674 DPYSQ14117 519 aa12.71□□□□□ -0.37
SYNM-203ENST00000560674 IL17AQ16552 155 aa12.71□□□□□ -0.37
SYNM-203ENST00000560674 SPATA6LQ8N4H0 392 aa12.71□□□□□ -0.37
SYNM-203ENST00000560674 UROC1Q96N76 676 aa12.71□□□□□ -0.37
SYNM-203ENST00000560674 SLC17A7Q9P2U7 560 aa12.71□□□□□ -0.37
SYNM-203ENST00000560674 TMA7Q9Y2S6 64 aaKnown RBP12.71□□□□□ -0.37
SYNM-203ENST00000560674 CBFA2T3O75081 653 aa12.71□□□□□ -0.37
SYNM-203ENST00000560674 CTBP1Q13363 440 aa12.71□□□□□ -0.37
SYNM-203ENST00000560674 GPAT3Q53EU6 434 aa12.71□□□□□ -0.37
SYNM-203ENST00000560674 PPM1LQ5SGD2 360 aa12.71□□□□□ -0.37
SYNM-203ENST00000560674 CELF3Q5SZQ8 465 aaKnown RBP12.71□□□□□ -0.37
SYNM-203ENST00000560674 IQSEC1Q6DN90 963 aa12.71□□□□□ -0.37
SYNM-203ENST00000560674 PAGE2Q7Z2X7 111 aa12.71□□□□□ -0.37
SYNM-203ENST00000560674 GSTCDQ8NEC7 633 aa12.71□□□□□ -0.37
SYNM-203ENST00000560674 ACO2Q99798 780 aaKnown RBP12.71□□□□□ -0.37
SYNM-203ENST00000560674 DNMT3LQ9UJW3 386 aa12.71□□□□□ -0.37
SYNM-203ENST00000560674 PRDM4Q9UKN5 801 aa12.71□□□□□ -0.37
SYNM-203ENST00000560674 FBXO5Q9UKT4 447 aa12.71□□□□□ -0.37
SYNM-203ENST00000560674 NCKAP1Q9Y2A7 1128 aa12.71□□□□□ -0.37
SYNM-203ENST00000560674 PCDHGA4Q9Y5G9 962 aa12.71□□□□□ -0.37
SYNM-203ENST00000560674 BBIP1A8MTZ0 92 aa12.71□□□□□ -0.38
SYNM-203ENST00000560674 PSMD11O00231 422 aa12.71□□□□□ -0.38
SYNM-203ENST00000560674 MGRN1O60291 552 aa12.71□□□□□ -0.38
SYNM-203ENST00000560674 XYLBO75191 536 aa12.71□□□□□ -0.38
SYNM-203ENST00000560674 AVILO75366 819 aa12.71□□□□□ -0.38
SYNM-203ENST00000560674 BPGMP07738 259 aa12.71□□□□□ -0.38
SYNM-203ENST00000560674 SLC7A2P52569 658 aa12.71□□□□□ -0.38
SYNM-203ENST00000560674 PFKPQ01813 784 aa12.71□□□□□ -0.38
SYNM-203ENST00000560674 PABPC1LQ4VXU2 614 aaKnown RBP12.71□□□□□ -0.38
SYNM-203ENST00000560674 VSIG10LQ86VR7 867 aa12.71□□□□□ -0.38
SYNM-203ENST00000560674 OR52K2Q8NGK3 314 aa12.71□□□□□ -0.38
SYNM-203ENST00000560674 COL26A1Q96A83 441 aa12.71□□□□□ -0.38
SYNM-203ENST00000560674 PANX1Q96RD7 426 aa12.71□□□□□ -0.38
SYNM-203ENST00000560674 ADAM2Q99965 735 aa12.71□□□□□ -0.38
SYNM-203ENST00000560674 SLC39A8Q9C0K1 460 aa12.71□□□□□ -0.38
SYNM-203ENST00000560674 PIGUQ9H490 435 aa12.71□□□□□ -0.38
SYNM-203ENST00000560674 ARL8BQ9NVJ2 186 aa12.71□□□□□ -0.38
SYNM-203ENST00000560674 SH3GLB1Q9Y371 365 aa12.71□□□□□ -0.38
SYNM-203ENST00000560674 NR2F1P10589 423 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 QPCTQ16769 361 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 NEK5Q6P3R8 708 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 KIAA0319LQ8IZA0 1049 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 PQLC1Q8N2U9 271 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 MKL1Q969V6 931 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 WDR18Q9BV38 432 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 MAGEL2Q9UJ55 1249 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 ZNF222Q9UK12 451 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 ATP6AP2A0A1C7CYW4 349 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 TRAFD1O14545 582 aaPredicted RBP12.7□□□□□ -0.38
SYNM-203ENST00000560674 ATP6AP2O75787 350 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 XKR6Q5GH73 641 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 LIN54Q6MZP7 749 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 FOXR2Q6PJQ5 311 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 GRIN3AQ8TCU5 1115 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 CDT1Q9H211 546 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 ATP13A3Q9H7F0 1226 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 PRDM8Q9NQV8 689 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 RNF19AQ9NV58 838 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 EGFL7Q9UHF1 273 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 OGDHLQ9ULD0 1010 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 CCDC189A1A4V9 331 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 MEIS2O14770 477 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 MAFO75444 373 aaPredicted RBP12.7□□□□□ -0.38
SYNM-203ENST00000560674 ETS2P15036 469 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 MYL9P24844 172 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 TNFSF9P41273 254 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 CDK9P50750 372 aaKnown RBP12.7□□□□□ -0.38
SYNM-203ENST00000560674 BMT2Q1RMZ1 405 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 FNBP1LQ5T0N5 605 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 HECTD3Q5T447 861 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 LRRC17Q8N6Y2 441 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 WDR12Q9GZL7 423 aaKnown RBP12.7□□□□□ -0.38
SYNM-203ENST00000560674 SSR3Q9UNL2 185 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 ING4Q9UNL4 249 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 UBIAD1Q9Y5Z9 338 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 OR10H3O60404 316 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 FTH1P02794 183 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 ERCC2P18074 760 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 PSEN1P49768 467 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 253 ms