RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 C11orf84Q9BUA3 381 aaPredicted RBP8.63□□□□□ -1.03
CCDC33-209ENST00000560565 SLC25A23Q9BV35 468 aa8.63□□□□□ -1.03
CCDC33-209ENST00000560565 NMRAL1Q9HBL8 299 aa8.63□□□□□ -1.03
CCDC33-209ENST00000560565 ZBTB26Q9HCK0 441 aa8.63□□□□□ -1.03
CCDC33-209ENST00000560565 PFDN4Q9NQP4 134 aa8.63□□□□□ -1.03
CCDC33-209ENST00000560565 ATAD3AQ9NVI7 634 aa8.63□□□□□ -1.03
CCDC33-209ENST00000560565 DDX18Q9NVP1 670 aaKnown RBP8.63□□□□□ -1.03
CCDC33-209ENST00000560565 ARMC1Q9NVT9 282 aa8.63□□□□□ -1.03
CCDC33-209ENST00000560565 PKD2L2Q9NZM6 624 aa8.63□□□□□ -1.03
CCDC33-209ENST00000560565 HESX1Q9UBX0 185 aa8.63□□□□□ -1.03
CCDC33-209ENST00000560565 PCSK1NQ9UHG2 260 aa8.63□□□□□ -1.03
CCDC33-209ENST00000560565 BARX2Q9UMQ3 279 aaPredicted RBP8.63□□□□□ -1.03
CCDC33-209ENST00000560565 HES2Q9Y543 173 aa8.63□□□□□ -1.03
CCDC33-209ENST00000560565 MRPL42Q9Y6G3 142 aaKnown RBP8.63□□□□□ -1.03
CCDC33-209ENST00000560565 COL4A4P53420 1690 aaPredicted RBP8.62□□□□□ -1.03
CCDC33-209ENST00000560565 LOC100653049A0A140TA62 436 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 FAM170AA1A519 330 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 C16orf96A6NNT2 1141 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 CXorf49A8MYA2 514 aaPredicted RBP8.62□□□□□ -1.03
CCDC33-209ENST00000560565 C5orf67F2Z3F1 127 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 CILPO75339 1184 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 KRT34O76011 436 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 ALDOAP04075 364 aaKnown RBP8.62□□□□□ -1.03
CCDC33-209ENST00000560565 BMP2P12643 396 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 TCF4P15884 667 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 AKAP5P24588 427 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 TKTP29401 623 aaKnown RBP8.62□□□□□ -1.03
CCDC33-209ENST00000560565 SLC5A2P31639 672 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 MLH1P40692 756 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 GLUD2P49448 558 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 TMBIM6P55061 237 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 C21orf59P57076 290 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 STX1BP61266 288 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 MRPS22P82650 360 aaKnown RBP8.62□□□□□ -1.03
CCDC33-209ENST00000560565 FOXM1Q08050 763 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 GALNT1Q10472 559 aaPredicted RBP8.62□□□□□ -1.03
CCDC33-209ENST00000560565 PRPSAP1Q14558 356 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 TXNRD3NBQ6F5E7 133 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 OR6B2Q6IFH4 312 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 FAM45BPQ6NSW5 357 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 PPP4R4Q6NUP7 873 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 LLGL2Q6P1M3 1020 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 DENND1BQ6P3S1 775 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 KLHL35Q6PF15 583 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 C16orf87Q6PH81 154 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 TTC33Q6PID6 262 aaPredicted RBP8.62□□□□□ -1.03
CCDC33-209ENST00000560565 ZYG11AQ6WRX3 759 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 LIMS2Q7Z4I7 341 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 TMEM110Q86TL2 294 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 LINC00523Q86TU6 105 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 ZNF598Q86UK7 904 aaKnown RBP8.62□□□□□ -1.03
CCDC33-209ENST00000560565 SNX32Q86XE0 403 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 ABI1Q8IZP0 508 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 TTC30BQ8N4P2 665 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 WDTC1Q8N5D0 677 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 TOP6BLQ8N6T0 577 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 POU5F2Q8N7G0 328 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 HIPK4Q8NE63 616 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 FBXO27Q8NI29 283 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 FAM45AQ8TCE6 357 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 RXFP2Q8WXD0 754 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 ZUFSPQ96AP4 578 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 MRPL38Q96DV4 380 aaKnown RBP8.62□□□□□ -1.03
CCDC33-209ENST00000560565 LENG8Q96PV6 779 aaPredicted RBP8.62□□□□□ -1.03
CCDC33-209ENST00000560565 RBBP8Q99708 897 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 HOPXQ9BPY8 73 aaPredicted RBP8.62□□□□□ -1.03
CCDC33-209ENST00000560565 TMEM79Q9BSE2 394 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 TDRD1Q9BXT4 1180 aaKnown RBP8.62□□□□□ -1.03
CCDC33-209ENST00000560565 RHOBTB2Q9BYZ6 727 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 ADAM33Q9BZ11 813 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 COPS7BQ9H9Q2 264 aaPredicted RBP8.62□□□□□ -1.03
CCDC33-209ENST00000560565 SNX15Q9NRS6 342 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 TMEM45AQ9NWC5 275 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 OXSMQ9NWU1 459 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 HSFX1Q9UBD0 423 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 NXF1Q9UBU9 619 aaKnown RBP8.62□□□□□ -1.03
CCDC33-209ENST00000560565 APPL1Q9UKG1 709 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 TRHDEQ9UKU6 1024 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 SARDHQ9UL12 918 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 HEY1Q9Y5J3 304 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 RPS6KL1Q9Y6S9 549 aa8.62□□□□□ -1.03
CCDC33-209ENST00000560565 KIAA1671Q9BY89 1806 aa8.61□□□□□ -1.03
CCDC33-209ENST00000560565 GREB1Q4ZG55 1949 aa8.61□□□□□ -1.03
CCDC33-209ENST00000560565 A0A087X1B8 175 aa8.61□□□□□ -1.03
CCDC33-209ENST00000560565 SAC3D1A6NKF1 404 aa8.61□□□□□ -1.03
CCDC33-209ENST00000560565 ZNF839A8K0R7 811 aa8.61□□□□□ -1.03
CCDC33-209ENST00000560565 GOLGA8TH3BQL2 631 aa8.61□□□□□ -1.03
CCDC33-209ENST00000560565 CYB561D2O14569 222 aa8.61□□□□□ -1.03
CCDC33-209ENST00000560565 ZNF195O14628 629 aa8.61□□□□□ -1.03
CCDC33-209ENST00000560565 PTGESO14684 152 aa8.61□□□□□ -1.03
CCDC33-209ENST00000560565 GIPC1O14908 333 aa8.61□□□□□ -1.03
CCDC33-209ENST00000560565 GPR37L1O60883 481 aa8.61□□□□□ -1.03
CCDC33-209ENST00000560565 AVILO75366 819 aa8.61□□□□□ -1.03
CCDC33-209ENST00000560565 SRP72O76094 671 aaKnown RBP8.61□□□□□ -1.03
CCDC33-209ENST00000560565 MICAL2O94851 1124 aa8.61□□□□□ -1.03
CCDC33-209ENST00000560565 NTRK1P04629 796 aa8.61□□□□□ -1.03
CCDC33-209ENST00000560565 GPIP06744 558 aa8.61□□□□□ -1.03
CCDC33-209ENST00000560565 CFHP08603 1231 aa8.61□□□□□ -1.03
CCDC33-209ENST00000560565 LINC00271P0C7V0 271 aa8.61□□□□□ -1.03
CCDC33-209ENST00000560565 OCM2P0CE71 109 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms