RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 SLC6A3Q01959 620 aa12.92□□□□□ -0.34
RABGGTA-213ENST00000560127 LRRC63Q05C16 580 aa12.92□□□□□ -0.34
RABGGTA-213ENST00000560127 KLRB1Q12918 225 aa12.92□□□□□ -0.34
RABGGTA-213ENST00000560127 INPP5AQ14642 412 aa12.92□□□□□ -0.34
RABGGTA-213ENST00000560127 AMZ1Q400G9 498 aa12.92□□□□□ -0.34
RABGGTA-213ENST00000560127 TMEM52BQ4KMG9 183 aa12.92□□□□□ -0.34
RABGGTA-213ENST00000560127 LACTB2Q53H82 288 aaPredicted RBP12.92□□□□□ -0.34
RABGGTA-213ENST00000560127 COBLL1Q53SF7 1204 aa12.92□□□□□ -0.34
RABGGTA-213ENST00000560127 ATXN7L2Q5T6C5 722 aaPredicted RBP12.92□□□□□ -0.34
RABGGTA-213ENST00000560127 SPECC1LQ69YQ0 1117 aa12.92□□□□□ -0.34
RABGGTA-213ENST00000560127 FOXR2Q6PJQ5 311 aa12.92□□□□□ -0.34
RABGGTA-213ENST00000560127 GDPD4Q6W3E5 623 aa12.92□□□□□ -0.34
RABGGTA-213ENST00000560127 TAF8Q7Z7C8 310 aa12.92□□□□□ -0.34
RABGGTA-213ENST00000560127 PASD1Q8IV76 773 aa12.92□□□□□ -0.34
RABGGTA-213ENST00000560127 DRC7Q8IY82 874 aa12.92□□□□□ -0.34
RABGGTA-213ENST00000560127 ZNF397Q8NF99 534 aaPredicted RBP12.92□□□□□ -0.34
RABGGTA-213ENST00000560127 SPATA20Q8TB22 786 aa12.92□□□□□ -0.34
RABGGTA-213ENST00000560127 OR1E3Q8WZA6 343 aa12.92□□□□□ -0.34
RABGGTA-213ENST00000560127 NT5C3BQ969T7 300 aa12.92□□□□□ -0.34
RABGGTA-213ENST00000560127 PGAP3Q96FM1 320 aaPredicted RBP12.92□□□□□ -0.34
RABGGTA-213ENST00000560127 SLC45A3Q96JT2 553 aa12.92□□□□□ -0.34
RABGGTA-213ENST00000560127 CCDC74BQ96LY2 380 aa12.92□□□□□ -0.34
RABGGTA-213ENST00000560127 WDR92Q96MX6 357 aa12.92□□□□□ -0.34
RABGGTA-213ENST00000560127 CHMP5Q9NZZ3 219 aa12.92□□□□□ -0.34
RABGGTA-213ENST00000560127 ZNF106Q9H2Y7 1883 aaKnown RBP12.91□□□□□ -0.34
RABGGTA-213ENST00000560127 OTOGQ6ZRI0 2925 aa12.91□□□□□ -0.34
RABGGTA-213ENST00000560127 DIDO1Q9BTC0 2240 aaKnown RBP12.91□□□□□ -0.34
RABGGTA-213ENST00000560127 CXorf51AA0A1B0GTR3 108 aa12.91□□□□□ -0.34
RABGGTA-213ENST00000560127 CAPN5O15484 640 aaPredicted RBP12.91□□□□□ -0.34
RABGGTA-213ENST00000560127 ZNF202O95125 648 aa12.91□□□□□ -0.34
RABGGTA-213ENST00000560127 KRT7P08729 469 aa12.91□□□□□ -0.34
RABGGTA-213ENST00000560127 OAS2P29728 719 aaKnown RBP12.91□□□□□ -0.34
RABGGTA-213ENST00000560127 SULT1E1P49888 294 aa12.91□□□□□ -0.34
RABGGTA-213ENST00000560127 DEUP1Q05D60 604 aa12.91□□□□□ -0.34
RABGGTA-213ENST00000560127 CDC20Q12834 499 aa12.91□□□□□ -0.34
RABGGTA-213ENST00000560127 PNOCQ13519 176 aa12.91□□□□□ -0.34
RABGGTA-213ENST00000560127 POLD3Q15054 466 aaPredicted RBP12.91□□□□□ -0.34
RABGGTA-213ENST00000560127 PTPN20Q4JDL3 420 aa12.91□□□□□ -0.34
RABGGTA-213ENST00000560127 ZNF658Q5TYW1 1059 aaPredicted RBP12.91□□□□□ -0.34
RABGGTA-213ENST00000560127 LEKR1Q6ZMV7 388 aa12.91□□□□□ -0.34
RABGGTA-213ENST00000560127 ZNF438Q7Z4V0 828 aa12.91□□□□□ -0.34
RABGGTA-213ENST00000560127 IRF2BP1Q8IU81 584 aa12.91□□□□□ -0.34
RABGGTA-213ENST00000560127 ATL2Q8NHH9 583 aa12.91□□□□□ -0.34
RABGGTA-213ENST00000560127 CCL4L1Q8NHW4 92 aa12.91□□□□□ -0.34
RABGGTA-213ENST00000560127 ART4Q93070 314 aa12.91□□□□□ -0.34
RABGGTA-213ENST00000560127 DDA1Q9BW61 102 aa12.91□□□□□ -0.34
RABGGTA-213ENST00000560127 ZYG11BQ9C0D3 744 aa12.91□□□□□ -0.34
RABGGTA-213ENST00000560127 INTS2Q9H0H0 1204 aaKnown RBP12.91□□□□□ -0.34
RABGGTA-213ENST00000560127 TMEM168Q9H0V1 697 aa12.91□□□□□ -0.34
RABGGTA-213ENST00000560127 DPEP2Q9H4A9 486 aa12.91□□□□□ -0.34
RABGGTA-213ENST00000560127 FGF22Q9HCT0 170 aa12.91□□□□□ -0.34
RABGGTA-213ENST00000560127 UBE2TQ9NPD8 197 aaPredicted RBP12.91□□□□□ -0.34
RABGGTA-213ENST00000560127 MRPL40Q9NQ50 206 aaKnown RBP12.91□□□□□ -0.34
RABGGTA-213ENST00000560127 NDFIP2Q9NV92 336 aa12.91□□□□□ -0.34
RABGGTA-213ENST00000560127 RRN3Q9NYV6 651 aa12.91□□□□□ -0.34
RABGGTA-213ENST00000560127 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.91□□□□□ -0.34
RABGGTA-213ENST00000560127 F8P00451 2351 aa12.91□□□□□ -0.34
RABGGTA-213ENST00000560127 APCP25054 2843 aa12.9□□□□□ -0.34
RABGGTA-213ENST00000560127 TMEM202A6NGA9 273 aa12.9□□□□□ -0.34
RABGGTA-213ENST00000560127 BECN2A8MW95 431 aa12.9□□□□□ -0.34
RABGGTA-213ENST00000560127 AGFG2O95081 481 aa12.9□□□□□ -0.34
RABGGTA-213ENST00000560127 RNF224P0DH78 156 aa12.9□□□□□ -0.34
RABGGTA-213ENST00000560127 NR1D1P20393 614 aa12.9□□□□□ -0.34
RABGGTA-213ENST00000560127 MAZP56270 477 aaKnown RBP12.9□□□□□ -0.34
RABGGTA-213ENST00000560127 RNASE9P60153 205 aaKnown RBP12.9□□□□□ -0.34
RABGGTA-213ENST00000560127 NR1D2Q14995 579 aa12.9□□□□□ -0.34
RABGGTA-213ENST00000560127 DEFB109BQ30KR1 87 aa12.9□□□□□ -0.34
RABGGTA-213ENST00000560127 CCDC40Q4G0X9 1142 aa12.9□□□□□ -0.34
RABGGTA-213ENST00000560127 ACBD5Q5T8D3 534 aaPredicted RBP12.9□□□□□ -0.34
RABGGTA-213ENST00000560127 C17orf82Q86X59 251 aaPredicted RBP12.9□□□□□ -0.34
RABGGTA-213ENST00000560127 C1orf131Q8NDD1 294 aaKnown RBP12.9□□□□□ -0.34
RABGGTA-213ENST00000560127 APOBEC4Q8WW27 367 aaKnown RBP12.9□□□□□ -0.34
RABGGTA-213ENST00000560127 CEP63Q96MT8 703 aa12.9□□□□□ -0.34
RABGGTA-213ENST00000560127 TBCBQ99426 244 aa12.9□□□□□ -0.34
RABGGTA-213ENST00000560127 PPARGC1AQ9UBK2 798 aaKnown RBP12.9□□□□□ -0.34
RABGGTA-213ENST00000560127 DKK3Q9UBP4 350 aa12.9□□□□□ -0.34
RABGGTA-213ENST00000560127 PILRAQ9UKJ1 303 aa12.9□□□□□ -0.34
RABGGTA-213ENST00000560127 PCDHGC3Q9UN70 934 aa12.9□□□□□ -0.34
RABGGTA-213ENST00000560127 TP53TG5Q9Y2B4 290 aa12.9□□□□□ -0.34
RABGGTA-213ENST00000560127 K7EM74 188 aa12.89□□□□□ -0.35
RABGGTA-213ENST00000560127 F9P00740 461 aa12.89□□□□□ -0.35
RABGGTA-213ENST00000560127 PCCBP05166 539 aa12.89□□□□□ -0.35
RABGGTA-213ENST00000560127 CD1CP29017 333 aa12.89□□□□□ -0.35
RABGGTA-213ENST00000560127 ALDH4A1P30038 563 aa12.89□□□□□ -0.35
RABGGTA-213ENST00000560127 LIMK2P53671 638 aa12.89□□□□□ -0.35
RABGGTA-213ENST00000560127 GEMIN4P57678 1058 aaKnown RBP12.89□□□□□ -0.35
RABGGTA-213ENST00000560127 MTM1Q13496 603 aa12.89□□□□□ -0.35
RABGGTA-213ENST00000560127 AGERQ15109 404 aa12.89□□□□□ -0.35
RABGGTA-213ENST00000560127 CLPPQ16740 277 aaPredicted RBP12.89□□□□□ -0.35
RABGGTA-213ENST00000560127 ATP1A1-AS1Q5TC04 95 aa12.89□□□□□ -0.35
RABGGTA-213ENST00000560127 FHL5Q5TD97 284 aa12.89□□□□□ -0.35
RABGGTA-213ENST00000560127 CAPRIN2Q6IMN6 1127 aaKnown RBP12.89□□□□□ -0.35
RABGGTA-213ENST00000560127 NETO2Q8NC67 525 aa12.89□□□□□ -0.35
RABGGTA-213ENST00000560127 PLA2G15Q8NCC3 412 aa12.89□□□□□ -0.35
RABGGTA-213ENST00000560127 OR56A4Q8NGH8 313 aa12.89□□□□□ -0.35
RABGGTA-213ENST00000560127 FUBP1Q96AE4 644 aaKnown RBP12.89□□□□□ -0.35
RABGGTA-213ENST00000560127 HAPLN3Q96S86 360 aa12.89□□□□□ -0.35
RABGGTA-213ENST00000560127 SPRY4Q9C004 299 aa12.89□□□□□ -0.35
RABGGTA-213ENST00000560127 GPN2Q9H9Y4 310 aaPredicted RBP12.89□□□□□ -0.35
RABGGTA-213ENST00000560127 RMND1Q9NWS8 449 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms