RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 FAM167BQ9BTA0 163 aa17.93■□□□□ 0.46
SNX1-208ENST00000559844 MYLK2Q9H1R3 596 aa17.93■□□□□ 0.46
SNX1-208ENST00000559844 SCAMP3O14828 347 aaKnown RBP17.93■□□□□ 0.46
SNX1-208ENST00000559844 SIN3BO75182 1162 aa17.93■□□□□ 0.46
SNX1-208ENST00000559844 PROCP04070 461 aa17.93■□□□□ 0.46
SNX1-208ENST00000559844 SERPINH1P50454 418 aaKnown RBP17.93■□□□□ 0.46
SNX1-208ENST00000559844 NCALDP61601 193 aa17.93■□□□□ 0.46
SNX1-208ENST00000559844 STX3Q13277 289 aa17.93■□□□□ 0.46
SNX1-208ENST00000559844 THOC5Q13769 683 aaKnown RBP17.93■□□□□ 0.46
SNX1-208ENST00000559844 FASTKD1Q53R41 847 aaKnown RBP17.93■□□□□ 0.46
SNX1-208ENST00000559844 PPP1R14CQ8TAE6 165 aa17.93■□□□□ 0.46
SNX1-208ENST00000559844 WBP2Q969T9 261 aa17.93■□□□□ 0.46
SNX1-208ENST00000559844 ERP27Q96DN0 273 aa17.93■□□□□ 0.46
SNX1-208ENST00000559844 GPR22Q99680 433 aa17.93■□□□□ 0.46
SNX1-208ENST00000559844 DDX50Q9BQ39 737 aaKnown RBP17.93■□□□□ 0.46
SNX1-208ENST00000559844 POLR1EQ9GZS1 481 aaKnown RBP17.93■□□□□ 0.46
SNX1-208ENST00000559844 TREX1Q9NSU2 369 aa17.93■□□□□ 0.46
SNX1-208ENST00000559844 EPS15L1Q9UBC2 864 aa17.93■□□□□ 0.46
SNX1-208ENST00000559844 DCTN4Q9UJW0 460 aa17.93■□□□□ 0.46
SNX1-208ENST00000559844 ANKRD6Q9Y2G4 727 aa17.93■□□□□ 0.46
SNX1-208ENST00000559844 SH3BP1Q9Y3L3 701 aa17.93■□□□□ 0.46
SNX1-208ENST00000559844 MYO10Q9HD67 2058 aa17.92■□□□□ 0.46
SNX1-208ENST00000559844 C2CD4DB7Z1M9 353 aa17.92■□□□□ 0.46
SNX1-208ENST00000559844 FCARP24071 287 aa17.92■□□□□ 0.46
SNX1-208ENST00000559844 SLC6A4P31645 630 aa17.92■□□□□ 0.46
SNX1-208ENST00000559844 MAXP61244 160 aa17.92■□□□□ 0.46
SNX1-208ENST00000559844 OCRLQ01968 901 aa17.92■□□□□ 0.46
SNX1-208ENST00000559844 DSC2Q02487 901 aa17.92■□□□□ 0.46
SNX1-208ENST00000559844 SEPT6Q14141 434 aa17.92■□□□□ 0.46
SNX1-208ENST00000559844 ZNF235Q14590 738 aa17.92■□□□□ 0.46
SNX1-208ENST00000559844 AAK1Q2M2I8 961 aa17.92■□□□□ 0.46
SNX1-208ENST00000559844 PPM1JQ5JR12 505 aa17.92■□□□□ 0.46
SNX1-208ENST00000559844 ESRP1Q6NXG1 681 aaKnown RBP17.92■□□□□ 0.46
SNX1-208ENST00000559844 C16orf46Q6P387 395 aa17.92■□□□□ 0.46
SNX1-208ENST00000559844 CMC1Q7Z7K0 106 aa17.92■□□□□ 0.46
SNX1-208ENST00000559844 LCA5Q86VQ0 697 aa17.92■□□□□ 0.46
SNX1-208ENST00000559844 CRLF3Q8IUI8 442 aa17.92■□□□□ 0.46
SNX1-208ENST00000559844 RIN3Q8TB24 985 aa17.92■□□□□ 0.46
SNX1-208ENST00000559844 ATXN7L3BQ96GX2 97 aa17.92■□□□□ 0.46
SNX1-208ENST00000559844 TRPV4Q9HBA0 871 aa17.92■□□□□ 0.46
SNX1-208ENST00000559844 ZFP14Q9HCL3 533 aa17.92■□□□□ 0.46
SNX1-208ENST00000559844 SLC40A1Q9NP59 571 aa17.92■□□□□ 0.46
SNX1-208ENST00000559844 THAP1Q9NVV9 213 aa17.92■□□□□ 0.46
SNX1-208ENST00000559844 MID2Q9UJV3 735 aa17.92■□□□□ 0.46
SNX1-208ENST00000559844 A0A096LPK6 155 aa17.91■□□□□ 0.46
SNX1-208ENST00000559844 A0A0G2JND7 137 aa17.91■□□□□ 0.46
SNX1-208ENST00000559844 SNNO75324 88 aaPredicted RBP17.91■□□□□ 0.46
SNX1-208ENST00000559844 CLDN11O75508 207 aa17.91■□□□□ 0.46
SNX1-208ENST00000559844 VAPBO95292 243 aa17.91■□□□□ 0.46
SNX1-208ENST00000559844 PAPSS2O95340 614 aaPredicted RBP17.91■□□□□ 0.46
SNX1-208ENST00000559844 MMP2P08253 660 aa17.91■□□□□ 0.46
SNX1-208ENST00000559844 CORO1AP31146 461 aaKnown RBP17.91■□□□□ 0.46
SNX1-208ENST00000559844 ACVRL1P37023 503 aa17.91■□□□□ 0.46
SNX1-208ENST00000559844 ARCN1P48444 511 aaKnown RBP17.91■□□□□ 0.46
SNX1-208ENST00000559844 GNA12Q03113 381 aa17.91■□□□□ 0.46
SNX1-208ENST00000559844 TANGO2Q6ICL3 276 aa17.91■□□□□ 0.46
SNX1-208ENST00000559844 ZC3HC1Q86WB0 502 aaKnown RBP17.91■□□□□ 0.46
SNX1-208ENST00000559844 DENND1CQ8IV53 801 aa17.91■□□□□ 0.46
SNX1-208ENST00000559844 SLC25A41Q8N5S1 370 aa17.91■□□□□ 0.46
SNX1-208ENST00000559844 ARRDC2Q8TBH0 407 aa17.91■□□□□ 0.46
SNX1-208ENST00000559844 RSPRY1Q96DX4 576 aa17.91■□□□□ 0.46
SNX1-208ENST00000559844 MYEOVQ96EZ4 313 aa17.91■□□□□ 0.46
SNX1-208ENST00000559844 TMEM216Q9P0N5 145 aa17.91■□□□□ 0.46
SNX1-208ENST00000559844 TCF20Q9UGU0 1960 aaKnown RBP17.91■□□□□ 0.46
SNX1-208ENST00000559844 CCDC78A2IDD5 438 aa17.91■□□□□ 0.46
SNX1-208ENST00000559844 TOP3BO95985 862 aaKnown RBP17.91■□□□□ 0.46
SNX1-208ENST00000559844 DLDP09622 509 aaKnown RBP17.91■□□□□ 0.46
SNX1-208ENST00000559844 GRK2P25098 689 aa17.91■□□□□ 0.46
SNX1-208ENST00000559844 CHRNA4P43681 627 aa17.91■□□□□ 0.46
SNX1-208ENST00000559844 IRX4P78413 519 aa17.91■□□□□ 0.46
SNX1-208ENST00000559844 USP4Q13107 963 aa17.91■□□□□ 0.46
SNX1-208ENST00000559844 ZNF77Q15935 545 aa17.91■□□□□ 0.46
SNX1-208ENST00000559844 MBLAC2Q68D91 279 aa17.91■□□□□ 0.46
SNX1-208ENST00000559844 RFWD3Q6PCD5 774 aa17.91■□□□□ 0.46
SNX1-208ENST00000559844 PARM1Q6UWI2 310 aa17.91■□□□□ 0.46
SNX1-208ENST00000559844 CHST9Q7L1S5 443 aa17.91■□□□□ 0.46
SNX1-208ENST00000559844 KDELC2Q7Z4H8 507 aa17.91■□□□□ 0.46
SNX1-208ENST00000559844 CFAP52Q8N1V2 620 aa17.91■□□□□ 0.46
SNX1-208ENST00000559844 PGBD5Q8N414 524 aa17.91■□□□□ 0.46
SNX1-208ENST00000559844 CALML6Q8TD86 181 aa17.91■□□□□ 0.46
SNX1-208ENST00000559844 FGF14Q92915 247 aa17.91■□□□□ 0.46
SNX1-208ENST00000559844 TSNARE1Q96NA8 513 aa17.91■□□□□ 0.46
SNX1-208ENST00000559844 KXD1Q9BQD3 176 aa17.91■□□□□ 0.46
SNX1-208ENST00000559844 SIKE1Q9BRV8 207 aa17.91■□□□□ 0.46
SNX1-208ENST00000559844 TMEM120AQ9BXJ8 343 aa17.91■□□□□ 0.46
SNX1-208ENST00000559844 PDFQ9HBH1 243 aa17.91■□□□□ 0.46
SNX1-208ENST00000559844 KCNK4Q9NYG8 393 aa17.91■□□□□ 0.46
SNX1-208ENST00000559844 ZFP69BQ9UJL9 534 aa17.91■□□□□ 0.46
SNX1-208ENST00000559844 LSM7Q9UK45 103 aaKnown RBP17.91■□□□□ 0.46
SNX1-208ENST00000559844 HGSO14964 777 aaPredicted RBP17.9■□□□□ 0.46
SNX1-208ENST00000559844 RASSF9O75901 435 aa17.9■□□□□ 0.46
SNX1-208ENST00000559844 UNC5CO95185 931 aa17.9■□□□□ 0.46
SNX1-208ENST00000559844 GSRP00390 522 aa17.9■□□□□ 0.46
SNX1-208ENST00000559844 KLKB1P03952 638 aa17.9■□□□□ 0.46
SNX1-208ENST00000559844 APOA4P06727 396 aa17.9■□□□□ 0.46
SNX1-208ENST00000559844 LAMB3Q13751 1172 aa17.9■□□□□ 0.46
SNX1-208ENST00000559844 GRM3Q14832 879 aa17.9■□□□□ 0.46
SNX1-208ENST00000559844 PCLAFQ15004 111 aa17.9■□□□□ 0.46
SNX1-208ENST00000559844 SLC14A2Q15849 920 aa17.9■□□□□ 0.46
SNX1-208ENST00000559844 TAF1BQ53T94 588 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms