RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 PCDHB9Q9Y5E1 797 aa9.11□□□□□ -0.95
HMG20A-209ENST00000559728 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.1□□□□□ -0.95
HMG20A-209ENST00000559728 LATO43561 262 aa9.1□□□□□ -0.95
HMG20A-209ENST00000559728 AP1G1O43747 822 aa9.1□□□□□ -0.95
HMG20A-209ENST00000559728 OPHN1O60890 802 aa9.1□□□□□ -0.95
HMG20A-209ENST00000559728 PHF2O75151 1096 aa9.1□□□□□ -0.95
HMG20A-209ENST00000559728 SERPINF2P08697 491 aa9.1□□□□□ -0.95
HMG20A-209ENST00000559728 LHCGRP22888 699 aa9.1□□□□□ -0.95
HMG20A-209ENST00000559728 CES1P23141 567 aa9.1□□□□□ -0.95
HMG20A-209ENST00000559728 SERPINA4P29622 427 aa9.1□□□□□ -0.95
HMG20A-209ENST00000559728 CNR2P34972 360 aa9.1□□□□□ -0.95
HMG20A-209ENST00000559728 NBL1P41271 181 aa9.1□□□□□ -0.95
HMG20A-209ENST00000559728 CHRNA4P43681 627 aa9.1□□□□□ -0.95
HMG20A-209ENST00000559728 WNT3AP56704 352 aa9.1□□□□□ -0.95
HMG20A-209ENST00000559728 SEMG2Q02383 582 aa9.1□□□□□ -0.95
HMG20A-209ENST00000559728 RAD51Q06609 339 aa9.1□□□□□ -0.95
HMG20A-209ENST00000559728 ITKQ08881 620 aa9.1□□□□□ -0.95
HMG20A-209ENST00000559728 GRM3Q14832 879 aa9.1□□□□□ -0.95
HMG20A-209ENST00000559728 QPCTQ16769 361 aa9.1□□□□□ -0.95
HMG20A-209ENST00000559728 PARP6Q2NL67 630 aa9.1□□□□□ -0.95
HMG20A-209ENST00000559728 TTC31Q49AM3 519 aaPredicted RBP9.1□□□□□ -0.95
HMG20A-209ENST00000559728 TMEM52BQ4KMG9 183 aa9.1□□□□□ -0.95
HMG20A-209ENST00000559728 TMEM259Q4ZIN3 620 aa9.1□□□□□ -0.95
HMG20A-209ENST00000559728 FAXCQ5TGI0 409 aa9.1□□□□□ -0.95
HMG20A-209ENST00000559728 DENND5AQ6IQ26 1287 aa9.1□□□□□ -0.95
HMG20A-209ENST00000559728 BRAT1Q6PJG6 821 aa9.1□□□□□ -0.95
HMG20A-209ENST00000559728 TMEFF1Q8IYR6 380 aa9.1□□□□□ -0.95
HMG20A-209ENST00000559728 DEFB119Q8N690 84 aa9.1□□□□□ -0.95
HMG20A-209ENST00000559728 SUMF1Q8NBK3 374 aa9.1□□□□□ -0.95
HMG20A-209ENST00000559728 C1orf216Q8TAB5 229 aa9.1□□□□□ -0.95
HMG20A-209ENST00000559728 SLCO2A1Q92959 643 aa9.1□□□□□ -0.95
HMG20A-209ENST00000559728 MAGOHBQ96A72 148 aaKnown RBP9.1□□□□□ -0.95
HMG20A-209ENST00000559728 EID2BQ96D98 161 aa9.1□□□□□ -0.95
HMG20A-209ENST00000559728 OMDQ99983 421 aa9.1□□□□□ -0.95
HMG20A-209ENST00000559728 BTBD1Q9H0C5 482 aa9.1□□□□□ -0.95
HMG20A-209ENST00000559728 SGK2Q9HBY8 427 aa9.1□□□□□ -0.95
HMG20A-209ENST00000559728 PCDH12Q9NPG4 1184 aa9.1□□□□□ -0.95
HMG20A-209ENST00000559728 RSPH14Q9UHP6 348 aa9.1□□□□□ -0.95
HMG20A-209ENST00000559728 ZNF148Q9UQR1 794 aa9.1□□□□□ -0.95
HMG20A-209ENST00000559728 CHKBQ9Y259 395 aa9.1□□□□□ -0.95
HMG20A-209ENST00000559728 A0A0J9YYE9 177 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 NPIPB15A6NHN6 443 aaPredicted RBP9.09□□□□□ -0.95
HMG20A-209ENST00000559728 METTL12A8MUP2 240 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 UPK3BL1B0FP48 263 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 UPK3BL2E5RIL1 263 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 WNT9AO14904 365 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 PMPCBO75439 489 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 SEMA4FO95754 770 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 TRBC1P01850 177 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 ALPIP09923 528 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 CD46P15529 392 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 OXTRP30559 389 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 DEKP35659 375 aaKnown RBP9.09□□□□□ -0.95
HMG20A-209ENST00000559728 HNF1BP35680 557 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 MMP12P39900 470 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 FNTAP49354 379 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 CDK18Q07002 472 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 ZNF284Q2VY69 593 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 ARMC12Q5T9G4 340 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 SEL1L3Q68CR1 1132 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 CCDC137Q6PK04 289 aaKnown RBP9.09□□□□□ -0.95
HMG20A-209ENST00000559728 RANBP10Q6VN20 620 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 TTC7BQ86TV6 843 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 SPATA4Q8NEY3 305 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 CADM4Q8NFZ8 388 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 OR2T34Q8NGX1 318 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 OR14C36Q8NHC7 312 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 ATL2Q8NHH9 583 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 RAB7BQ96AH8 199 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 BIRC7Q96CA5 298 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 SCRN2Q96FV2 425 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 PPP1R16AQ96I34 528 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 FEM1CQ96JP0 617 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 LYSMD1Q96S90 227 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 NAP1L3Q99457 506 aaPredicted RBP9.09□□□□□ -0.95
HMG20A-209ENST00000559728 GPR174Q9BXC1 333 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 DDX47Q9H0S4 455 aaKnown RBP9.09□□□□□ -0.95
HMG20A-209ENST00000559728 KDM4CQ9H3R0 1056 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 ETNK1Q9HBU6 452 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 PCDH9Q9HC56 1237 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 PREBQ9HCU5 417 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 VPS45Q9NRW7 570 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 HOMER3Q9NSC5 361 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 RNF14Q9UBS8 474 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 B4GALT6Q9UBX8 382 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 PCYOX1Q9UHG3 505 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 FAM153AQ9UHL3 310 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 NCKAP1Q9Y2A7 1128 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.09□□□□□ -0.95
HMG20A-209ENST00000559728 SPO11Q9Y5K1 396 aa9.09□□□□□ -0.95
HMG20A-209ENST00000559728 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.08□□□□□ -0.96
HMG20A-209ENST00000559728 A0A1W2PQ67 120 aa9.08□□□□□ -0.96
HMG20A-209ENST00000559728 TCRBV7S3A2A0A539 114 aa9.08□□□□□ -0.96
HMG20A-209ENST00000559728 PROB1E7EW31 1015 aa9.08□□□□□ -0.96
HMG20A-209ENST00000559728 RAD51BO15315 384 aa9.08□□□□□ -0.96
HMG20A-209ENST00000559728 TP73O15350 636 aa9.08□□□□□ -0.96
HMG20A-209ENST00000559728 ZNF500O60304 480 aaPredicted RBP9.08□□□□□ -0.96
HMG20A-209ENST00000559728 RNGTTO60942 597 aaKnown RBP9.08□□□□□ -0.96
HMG20A-209ENST00000559728 ZNF189O75820 626 aaPredicted RBP9.08□□□□□ -0.96
HMG20A-209ENST00000559728 CPP00450 1065 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms