RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 MARC1Q5VT66 337 aa12.68□□□□□ -0.38
LRRC28-214ENST00000559433 PARGQ86W56 976 aa12.68□□□□□ -0.38
LRRC28-214ENST00000559433 LRRC49Q8IUZ0 686 aa12.68□□□□□ -0.38
LRRC28-214ENST00000559433 PGBD5Q8N414 524 aa12.68□□□□□ -0.38
LRRC28-214ENST00000559433 TC2NQ8N9U0 490 aa12.68□□□□□ -0.38
LRRC28-214ENST00000559433 CENPTQ96BT3 561 aa12.68□□□□□ -0.38
LRRC28-214ENST00000559433 FAF2Q96CS3 445 aa12.68□□□□□ -0.38
LRRC28-214ENST00000559433 ECHDC3Q96DC8 303 aa12.68□□□□□ -0.38
LRRC28-214ENST00000559433 IFT43Q96FT9 208 aa12.68□□□□□ -0.38
LRRC28-214ENST00000559433 NUDCD1Q96RS6 583 aa12.68□□□□□ -0.38
LRRC28-214ENST00000559433 MGME1Q9BQP7 344 aa12.68□□□□□ -0.38
LRRC28-214ENST00000559433 ANP32EQ9BTT0 268 aa12.68□□□□□ -0.38
LRRC28-214ENST00000559433 RBSNQ9H1K0 784 aa12.68□□□□□ -0.38
LRRC28-214ENST00000559433 EVA1BQ9NVM1 165 aa12.68□□□□□ -0.38
LRRC28-214ENST00000559433 UCKL1Q9NWZ5 548 aa12.68□□□□□ -0.38
LRRC28-214ENST00000559433 INTUQ9ULD6 942 aa12.68□□□□□ -0.38
LRRC28-214ENST00000559433 LRP4O75096 1905 aa12.67□□□□□ -0.38
LRRC28-214ENST00000559433 LRRD1A4D1F6 860 aa12.67□□□□□ -0.38
LRRC28-214ENST00000559433 H3BM21 787 aa12.67□□□□□ -0.38
LRRC28-214ENST00000559433 TRAFD1O14545 582 aaPredicted RBP12.67□□□□□ -0.38
LRRC28-214ENST00000559433 FFAR2O15552 330 aa12.67□□□□□ -0.38
LRRC28-214ENST00000559433 LZTS3O60299 673 aaPredicted RBP12.67□□□□□ -0.38
LRRC28-214ENST00000559433 PIAS2O75928 621 aa12.67□□□□□ -0.38
LRRC28-214ENST00000559433 DKK1O94907 266 aa12.67□□□□□ -0.38
LRRC28-214ENST00000559433 MAP3K6O95382 1288 aa12.67□□□□□ -0.38
LRRC28-214ENST00000559433 JUPP14923 745 aa12.67□□□□□ -0.38
LRRC28-214ENST00000559433 CKMT2P17540 419 aa12.67□□□□□ -0.38
LRRC28-214ENST00000559433 CR2P20023 1033 aa12.67□□□□□ -0.38
LRRC28-214ENST00000559433 KDELR1P24390 212 aa12.67□□□□□ -0.38
LRRC28-214ENST00000559433 LIG3P49916 1009 aa12.67□□□□□ -0.38
LRRC28-214ENST00000559433 ZNF75DP51815 510 aa12.67□□□□□ -0.38
LRRC28-214ENST00000559433 THOP1P52888 689 aa12.67□□□□□ -0.38
LRRC28-214ENST00000559433 PFN3P60673 137 aa12.67□□□□□ -0.38
LRRC28-214ENST00000559433 MAXP61244 160 aa12.67□□□□□ -0.38
LRRC28-214ENST00000559433 HNRNPKP61978 463 aaKnown RBP eCLIP12.67□□□□□ -0.38
LRRC28-214ENST00000559433 POLR2LP62875 67 aaKnown RBP12.67□□□□□ -0.38
LRRC28-214ENST00000559433 DAB2P98082 770 aa12.67□□□□□ -0.38
LRRC28-214ENST00000559433 DNAJC3Q13217 504 aa12.67□□□□□ -0.38
LRRC28-214ENST00000559433 LRRC14Q15048 493 aa12.67□□□□□ -0.38
LRRC28-214ENST00000559433 TPRG1LQ5T0D9 272 aa12.67□□□□□ -0.38
LRRC28-214ENST00000559433 TIGD7Q6NT04 549 aaPredicted RBP12.67□□□□□ -0.38
LRRC28-214ENST00000559433 CCNI2Q6ZMN8 369 aaPredicted RBP12.67□□□□□ -0.38
LRRC28-214ENST00000559433 TMPRSS7Q7RTY8 843 aa12.67□□□□□ -0.38
LRRC28-214ENST00000559433 SLC25A45Q8N413 288 aa12.67□□□□□ -0.38
LRRC28-214ENST00000559433 KDF1Q8NAX2 398 aaPredicted RBP12.67□□□□□ -0.38
LRRC28-214ENST00000559433 TP53I13Q8NBR0 393 aaPredicted RBP12.67□□□□□ -0.38
LRRC28-214ENST00000559433 PDCD6IPQ8WUM4 868 aaKnown RBP12.67□□□□□ -0.38
LRRC28-214ENST00000559433 ZCCHC14Q8WYQ9 949 aaKnown RBP12.67□□□□□ -0.38
LRRC28-214ENST00000559433 RAPGEF5Q92565 580 aa12.67□□□□□ -0.38
LRRC28-214ENST00000559433 GATA6Q92908 595 aa12.67□□□□□ -0.38
LRRC28-214ENST00000559433 NSMCE3Q96MG7 304 aa12.67□□□□□ -0.38
LRRC28-214ENST00000559433 CAAP1Q9H8G2 361 aa12.67□□□□□ -0.38
LRRC28-214ENST00000559433 NOD2Q9HC29 1040 aa12.67□□□□□ -0.38
LRRC28-214ENST00000559433 NT5MQ9NPB1 228 aa12.67□□□□□ -0.38
LRRC28-214ENST00000559433 MBNL1Q9NR56 388 aaKnown RBP12.67□□□□□ -0.38
LRRC28-214ENST00000559433 ZMIZ1Q9ULJ6 1067 aa12.67□□□□□ -0.38
LRRC28-214ENST00000559433 PCDHGC4Q9Y5F7 938 aa12.67□□□□□ -0.38
LRRC28-214ENST00000559433 PCDHGA1Q9Y5H4 931 aa12.67□□□□□ -0.38
LRRC28-214ENST00000559433 IGF2RP11717 2491 aa12.66□□□□□ -0.38
LRRC28-214ENST00000559433 TRIM38O00635 465 aa12.66□□□□□ -0.38
LRRC28-214ENST00000559433 SIGLEC6O43699 453 aa12.66□□□□□ -0.38
LRRC28-214ENST00000559433 SOCS5O75159 536 aa12.66□□□□□ -0.38
LRRC28-214ENST00000559433 RFPL3O75679 317 aa12.66□□□□□ -0.38
LRRC28-214ENST00000559433 CPP00450 1065 aa12.66□□□□□ -0.38
LRRC28-214ENST00000559433 KRT1P04264 644 aa12.66□□□□□ -0.38
LRRC28-214ENST00000559433 ELFN1P0C7U0 828 aa12.66□□□□□ -0.38
LRRC28-214ENST00000559433 NME1P15531 152 aaKnown RBP12.66□□□□□ -0.38
LRRC28-214ENST00000559433 HNF1BP35680 557 aa12.66□□□□□ -0.38
LRRC28-214ENST00000559433 ACADVLP49748 655 aa12.66□□□□□ -0.38
LRRC28-214ENST00000559433 YPEL5P62699 121 aa12.66□□□□□ -0.38
LRRC28-214ENST00000559433 GBE1Q04446 702 aa12.66□□□□□ -0.38
LRRC28-214ENST00000559433 ITKQ08881 620 aa12.66□□□□□ -0.38
LRRC28-214ENST00000559433 RALGDSQ12967 914 aa12.66□□□□□ -0.38
LRRC28-214ENST00000559433 ZNF211Q13398 564 aaPredicted RBP12.66□□□□□ -0.38
LRRC28-214ENST00000559433 IFI16Q16666 785 aaKnown RBP12.66□□□□□ -0.38
LRRC28-214ENST00000559433 ODF2Q5BJF6 829 aa12.66□□□□□ -0.38
LRRC28-214ENST00000559433 RALGPS1Q5JS13 557 aa12.66□□□□□ -0.38
LRRC28-214ENST00000559433 DHRS13Q6UX07 377 aa12.66□□□□□ -0.38
LRRC28-214ENST00000559433 TMPRSS12Q86WS5 348 aa12.66□□□□□ -0.38
LRRC28-214ENST00000559433 PQLC3Q8N755 202 aa12.66□□□□□ -0.38
LRRC28-214ENST00000559433 BTN2A2Q8WVV5 523 aa12.66□□□□□ -0.38
LRRC28-214ENST00000559433 MRFAP1L1Q96HT8 127 aa12.66□□□□□ -0.38
LRRC28-214ENST00000559433 ZNF830Q96NB3 372 aaPredicted RBP12.66□□□□□ -0.38
LRRC28-214ENST00000559433 TMEM121BQ9BXQ6 578 aaPredicted RBP12.66□□□□□ -0.38
LRRC28-214ENST00000559433 CCDC86Q9H6F5 360 aaKnown RBP12.66□□□□□ -0.38
LRRC28-214ENST00000559433 TTLL3Q9Y4R7 772 aa12.66□□□□□ -0.38
LRRC28-214ENST00000559433 USP24Q9UPU5 2620 aa12.66□□□□□ -0.38
LRRC28-214ENST00000559433 ASPMQ8IZT6 3477 aa12.65□□□□□ -0.38
LRRC28-214ENST00000559433 A0A1W2PQ67 120 aa12.65□□□□□ -0.38
LRRC28-214ENST00000559433 CFAP69A5D8W1 941 aa12.65□□□□□ -0.38
LRRC28-214ENST00000559433 A8MX80 341 aa12.65□□□□□ -0.38
LRRC28-214ENST00000559433 ZNF487B1APH4 448 aa12.65□□□□□ -0.38
LRRC28-214ENST00000559433 TOR1BO14657 336 aa12.65□□□□□ -0.38
LRRC28-214ENST00000559433 MATN3O15232 486 aa12.65□□□□□ -0.38
LRRC28-214ENST00000559433 HTRA2O43464 458 aaPredicted RBP12.65□□□□□ -0.38
LRRC28-214ENST00000559433 SPOPO43791 374 aa12.65□□□□□ -0.38
LRRC28-214ENST00000559433 NEBLO76041 1014 aa12.65□□□□□ -0.38
LRRC28-214ENST00000559433 CSF2P04141 144 aa12.65□□□□□ -0.38
LRRC28-214ENST00000559433 PCCBP05166 539 aa12.65□□□□□ -0.38
LRRC28-214ENST00000559433 TNNT1P13805 278 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms