RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 DHRS4Q9BTZ2 278 aa16.69■□□□□ 0.26
TPM1-219ENST00000559397 LRRC40Q9H9A6 602 aa16.69■□□□□ 0.26
TPM1-219ENST00000559397 PSD3Q9NYI0 1048 aa16.69■□□□□ 0.26
TPM1-219ENST00000559397 ZC3H7BQ9UGR2 993 aaKnown RBP16.69■□□□□ 0.26
TPM1-219ENST00000559397 SUN2Q9UH99 717 aa16.69■□□□□ 0.26
TPM1-219ENST00000559397 TTC28Q96AY4 2481 aa16.69■□□□□ 0.26
TPM1-219ENST00000559397 TCRBV9S1A1TA0A576 114 aa16.69■□□□□ 0.26
TPM1-219ENST00000559397 TTC24A2A3L6 582 aaPredicted RBP16.69■□□□□ 0.26
TPM1-219ENST00000559397 STK25O00506 426 aa16.69■□□□□ 0.26
TPM1-219ENST00000559397 SIN3BO75182 1162 aa16.69■□□□□ 0.26
TPM1-219ENST00000559397 CSNK1DP48730 415 aa16.69■□□□□ 0.26
TPM1-219ENST00000559397 SNRPD1P62314 119 aaKnown RBP16.69■□□□□ 0.26
TPM1-219ENST00000559397 SPARCL1Q14515 664 aa16.69■□□□□ 0.26
TPM1-219ENST00000559397 TERF2Q15554 542 aa16.69■□□□□ 0.26
TPM1-219ENST00000559397 KLHL38Q2WGJ6 581 aa16.69■□□□□ 0.26
TPM1-219ENST00000559397 DPY19L3Q6ZPD9 716 aa16.69■□□□□ 0.26
TPM1-219ENST00000559397 CYS1Q717R9 158 aa16.69■□□□□ 0.26
TPM1-219ENST00000559397 ARFGAP2Q8N6H7 521 aa16.69■□□□□ 0.26
TPM1-219ENST00000559397 FLCNQ8NFG4 579 aa16.69■□□□□ 0.26
TPM1-219ENST00000559397 ARRDC2Q8TBH0 407 aa16.69■□□□□ 0.26
TPM1-219ENST00000559397 POLR1EQ9GZS1 481 aaKnown RBP16.69■□□□□ 0.26
TPM1-219ENST00000559397 CD248Q9HCU0 757 aa16.69■□□□□ 0.26
TPM1-219ENST00000559397 CTNNAL1Q9UBT7 734 aa16.69■□□□□ 0.26
TPM1-219ENST00000559397 MMP17Q9ULZ9 603 aa16.69■□□□□ 0.26
TPM1-219ENST00000559397 AAR2Q9Y312 384 aaKnown RBP16.69■□□□□ 0.26
TPM1-219ENST00000559397 SIT1Q9Y3P8 196 aa16.69■□□□□ 0.26
TPM1-219ENST00000559397 TTLL3Q9Y4R7 772 aa16.69■□□□□ 0.26
TPM1-219ENST00000559397 A0A1W2PQF6 199 aa16.68■□□□□ 0.26
TPM1-219ENST00000559397 TMEM221A6NGB7 291 aa16.68■□□□□ 0.26
TPM1-219ENST00000559397 M0R296 226 aa16.68■□□□□ 0.26
TPM1-219ENST00000559397 INSIG1O15503 277 aa16.68■□□□□ 0.26
TPM1-219ENST00000559397 ANXA9O76027 345 aa16.68■□□□□ 0.26
TPM1-219ENST00000559397 NEBLO76041 1014 aa16.68■□□□□ 0.26
TPM1-219ENST00000559397 IGSF6O95976 241 aa16.68■□□□□ 0.26
TPM1-219ENST00000559397 EPHX1P07099 455 aa16.68■□□□□ 0.26
TPM1-219ENST00000559397 NIPAL4Q0D2K0 466 aa16.68■□□□□ 0.26
TPM1-219ENST00000559397 IHHQ14623 411 aa16.68■□□□□ 0.26
TPM1-219ENST00000559397 SDE2Q6IQ49 451 aa16.68■□□□□ 0.26
TPM1-219ENST00000559397 UNC5AQ6ZN44 842 aa16.68■□□□□ 0.26
TPM1-219ENST00000559397 CCNJLQ8IV13 435 aa16.68■□□□□ 0.26
TPM1-219ENST00000559397 CYP4X1Q8N118 509 aa16.68■□□□□ 0.26
TPM1-219ENST00000559397 CHST14Q8NCH0 376 aa16.68■□□□□ 0.26
TPM1-219ENST00000559397 STAMBPL1Q96FJ0 436 aa16.68■□□□□ 0.26
TPM1-219ENST00000559397 CFAP36Q96G28 342 aa16.68■□□□□ 0.26
TPM1-219ENST00000559397 NUDCD1Q96RS6 583 aa16.68■□□□□ 0.26
TPM1-219ENST00000559397 CYTH2Q99418 400 aa16.68■□□□□ 0.26
TPM1-219ENST00000559397 NAT9Q9BTE0 207 aa16.68■□□□□ 0.26
TPM1-219ENST00000559397 SLC25A51Q9H1U9 297 aa16.68■□□□□ 0.26
TPM1-219ENST00000559397 MFSD1Q9H3U5 465 aa16.68■□□□□ 0.26
TPM1-219ENST00000559397 PRSS16Q9NQE7 514 aa16.68■□□□□ 0.26
TPM1-219ENST00000559397 HAUS2Q9NVX0 235 aa16.68■□□□□ 0.26
TPM1-219ENST00000559397 MMP2P08253 660 aa16.67■□□□□ 0.26
TPM1-219ENST00000559397 COL9A1P20849 921 aa16.67■□□□□ 0.26
TPM1-219ENST00000559397 MGAT1P26572 445 aa16.67■□□□□ 0.26
TPM1-219ENST00000559397 ATP5DP30049 168 aa16.67■□□□□ 0.26
TPM1-219ENST00000559397 STX2P32856 288 aa16.67■□□□□ 0.26
TPM1-219ENST00000559397 RPS9P46781 194 aaKnown RBP16.67■□□□□ 0.26
TPM1-219ENST00000559397 SCNN1BP51168 640 aa16.67■□□□□ 0.26
TPM1-219ENST00000559397 CCNHP51946 323 aaPredicted RBP16.67■□□□□ 0.26
TPM1-219ENST00000559397 PPP2R2AP63151 447 aa16.67■□□□□ 0.26
TPM1-219ENST00000559397 DSC2Q02487 901 aa16.67■□□□□ 0.26
TPM1-219ENST00000559397 ITKQ08881 620 aa16.67■□□□□ 0.26
TPM1-219ENST00000559397 CAMK2GQ13555 558 aaPredicted RBP16.67■□□□□ 0.26
TPM1-219ENST00000559397 MYLK3Q32MK0 819 aa16.67■□□□□ 0.26
TPM1-219ENST00000559397 EOGTQ5NDL2 527 aa16.67■□□□□ 0.26
TPM1-219ENST00000559397 NCEH1Q6PIU2 408 aa16.67■□□□□ 0.26
TPM1-219ENST00000559397 SRLQ86TD4 932 aa16.67■□□□□ 0.26
TPM1-219ENST00000559397 EXOC3L1Q86VI1 746 aa16.67■□□□□ 0.26
TPM1-219ENST00000559397 OR52K1Q8NGK4 314 aa16.67■□□□□ 0.26
TPM1-219ENST00000559397 IMP4Q96G21 291 aaKnown RBP16.67■□□□□ 0.26
TPM1-219ENST00000559397 SEMA3CQ99985 751 aa16.67■□□□□ 0.26
TPM1-219ENST00000559397 CHRDQ9H2X0 955 aa16.67■□□□□ 0.26
TPM1-219ENST00000559397 NOD2Q9HC29 1040 aa16.67■□□□□ 0.26
TPM1-219ENST00000559397 POLR3BQ9NW08 1133 aaPredicted RBP16.67■□□□□ 0.26
TPM1-219ENST00000559397 EVLQ9UI08 416 aaPredicted RBP16.67■□□□□ 0.26
TPM1-219ENST00000559397 MAD1L1Q9Y6D9 718 aa16.67■□□□□ 0.26
TPM1-219ENST00000559397 POC1B-GALNT4F8VUJ3 575 aa16.66■□□□□ 0.26
TPM1-219ENST00000559397 AP3B1O00203 1094 aa16.66■□□□□ 0.26
TPM1-219ENST00000559397 BNIP3LO60238 219 aa16.66■□□□□ 0.26
TPM1-219ENST00000559397 DCNP07585 359 aaKnown RBP16.66■□□□□ 0.26
TPM1-219ENST00000559397 HOXB2P14652 356 aa16.66■□□□□ 0.26
TPM1-219ENST00000559397 GKP32189 559 aa16.66■□□□□ 0.26
TPM1-219ENST00000559397 HPDP32754 393 aaPredicted RBP16.66■□□□□ 0.26
TPM1-219ENST00000559397 ADRA1AP35348 466 aa16.66■□□□□ 0.26
TPM1-219ENST00000559397 RECQLP46063 649 aaPredicted RBP16.66■□□□□ 0.26
TPM1-219ENST00000559397 GEMP55040 296 aa16.66■□□□□ 0.26
TPM1-219ENST00000559397 SESN2P58004 480 aaPredicted RBP16.66■□□□□ 0.26
TPM1-219ENST00000559397 OLIG2Q13516 323 aa16.66■□□□□ 0.26
TPM1-219ENST00000559397 RALGPS1Q5JS13 557 aa16.66■□□□□ 0.26
TPM1-219ENST00000559397 NAPEPLDQ6IQ20 393 aa16.66■□□□□ 0.26
TPM1-219ENST00000559397 KIAA1211LQ6NV74 962 aa16.66■□□□□ 0.26
TPM1-219ENST00000559397 ADGRD1Q6QNK2 874 aa16.66■□□□□ 0.26
TPM1-219ENST00000559397 TMEM92Q6UXU6 159 aa16.66■□□□□ 0.26
TPM1-219ENST00000559397 LINC00523Q86TU6 105 aa16.66■□□□□ 0.26
TPM1-219ENST00000559397 STK40Q8N2I9 435 aa16.66■□□□□ 0.26
TPM1-219ENST00000559397 OR6K2Q8NGY2 324 aa16.66■□□□□ 0.26
TPM1-219ENST00000559397 SPATA22Q8NHS9 363 aa16.66■□□□□ 0.26
TPM1-219ENST00000559397 GSDMBQ8TAX9 411 aa16.66■□□□□ 0.26
TPM1-219ENST00000559397 TADA1Q96BN2 335 aa16.66■□□□□ 0.26
TPM1-219ENST00000559397 FAM129BQ96TA1 746 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms