RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 TBC1D3EA0A087X179 549 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 TBC1D3KA0A087X1G2 549 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.51□□□□□ -0.57
SNX1-204ENST00000559061 LNP1A1A4G5 178 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 TBC1D3FA6NER0 549 aaPredicted RBP11.51□□□□□ -0.57
SNX1-204ENST00000559061 NPIPB15A6NHN6 443 aaPredicted RBP11.51□□□□□ -0.57
SNX1-204ENST00000559061 LRRC72A6NJI9 287 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 MEI4A8MW99 385 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 TBC1D3LB9A6J9 549 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 H7C0C1 242 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 ZNF185O15231 689 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 ALPIP09923 528 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 TBC1D3HP0C7X1 549 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 CD27P26842 260 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 MAPK8P45983 427 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 ATP5OP48047 213 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 RAD51Q06609 339 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 OLIG2Q13516 323 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 GRM3Q14832 879 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 TPRG1LQ5T0D9 272 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 SEL1L2Q5TEA6 688 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 TBC1D3GQ6DHY5 549 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 TBC1D3CQ6IPX1 549 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 BRAT1Q6PJG6 821 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 GCNT7Q6ZNI0 430 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 RFLNAQ6ZTI6 216 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 DPPA4Q7L190 304 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 TTC7BQ86TV6 843 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 TSPAN33Q86UF1 283 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 TBC1D3Q8IZP1 549 aaPredicted RBP11.51□□□□□ -0.57
SNX1-204ENST00000559061 PELI3Q8N2H9 469 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 CBARPQ8N350 705 aaPredicted RBP11.51□□□□□ -0.57
SNX1-204ENST00000559061 PRELID2Q8N945 189 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 CCDC110Q8TBZ0 833 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 NSMCE1Q8WV22 266 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 UBE2Q2Q8WVN8 375 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 C1orf54Q8WWF1 131 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 FOXJ1Q92949 421 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 RAB7BQ96AH8 199 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 RTP4Q96DX8 246 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 TMEM121Q9BTD3 319 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 WRAP53Q9BUR4 548 aaKnown RBP11.51□□□□□ -0.57
SNX1-204ENST00000559061 C1QTNF2Q9BXJ5 285 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 SLC25A51Q9H1U9 297 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 TM9SF3Q9HD45 589 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 DYRK4Q9NR20 520 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 NCDNQ9UBB6 729 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 B4GALT6Q9UBX8 382 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 GMEB2Q9UKD1 530 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 RAB23Q9ULC3 237 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 CHKBQ9Y259 395 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 COQ6Q9Y2Z9 468 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 PPIL1Q9Y3C6 166 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 PCDHB9Q9Y5E1 797 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.51□□□□□ -0.57
SNX1-204ENST00000559061 ZNF106Q9H2Y7 1883 aaKnown RBP11.51□□□□□ -0.57
SNX1-204ENST00000559061 IGLON5A6NGN9 336 aa11.5□□□□□ -0.57
SNX1-204ENST00000559061 H0Y8X5 98 aa11.5□□□□□ -0.57
SNX1-204ENST00000559061 KCNN4O15554 427 aa11.5□□□□□ -0.57
SNX1-204ENST00000559061 GDF9O60383 454 aa11.5□□□□□ -0.57
SNX1-204ENST00000559061 MMP20O60882 483 aa11.5□□□□□ -0.57
SNX1-204ENST00000559061 CPP00450 1065 aa11.5□□□□□ -0.57
SNX1-204ENST00000559061 FGGP02679 453 aa11.5□□□□□ -0.57
SNX1-204ENST00000559061 ATXN1LP0C7T5 689 aaKnown RBP11.5□□□□□ -0.57
SNX1-204ENST00000559061 ZNF806P0C7X5 589 aa11.5□□□□□ -0.57
SNX1-204ENST00000559061 CTPS1P17812 591 aa11.5□□□□□ -0.57
SNX1-204ENST00000559061 IRX4P78413 519 aa11.5□□□□□ -0.57
SNX1-204ENST00000559061 ITKQ08881 620 aa11.5□□□□□ -0.57
SNX1-204ENST00000559061 SLC14A2Q15849 920 aa11.5□□□□□ -0.57
SNX1-204ENST00000559061 CNGA3Q16281 694 aa11.5□□□□□ -0.57
SNX1-204ENST00000559061 CSRP2Q16527 193 aa11.5□□□□□ -0.57
SNX1-204ENST00000559061 QPCTQ16769 361 aa11.5□□□□□ -0.57
SNX1-204ENST00000559061 NEK5Q6P3R8 708 aa11.5□□□□□ -0.57
SNX1-204ENST00000559061 TTC27Q6P3X3 843 aa11.5□□□□□ -0.57
SNX1-204ENST00000559061 SLC23A3Q6PIS1 610 aa11.5□□□□□ -0.57
SNX1-204ENST00000559061 PRR23CQ6ZRP0 262 aa11.5□□□□□ -0.57
SNX1-204ENST00000559061 NYAP1Q6ZVC0 841 aa11.5□□□□□ -0.57
SNX1-204ENST00000559061 BZW1Q7L1Q6 419 aaKnown RBP11.5□□□□□ -0.57
SNX1-204ENST00000559061 CDKL3Q8IVW4 592 aaPredicted RBP11.5□□□□□ -0.57
SNX1-204ENST00000559061 BBS5Q8N3I7 341 aa11.5□□□□□ -0.57
SNX1-204ENST00000559061 FAM71DQ8N9W8 422 aa11.5□□□□□ -0.57
SNX1-204ENST00000559061 TP53I13Q8NBR0 393 aaPredicted RBP11.5□□□□□ -0.57
SNX1-204ENST00000559061 OR2I1PQ8NGU4 316 aa11.5□□□□□ -0.57
SNX1-204ENST00000559061 SNX19Q92543 992 aa11.5□□□□□ -0.57
SNX1-204ENST00000559061 EID2BQ96D98 161 aa11.5□□□□□ -0.57
SNX1-204ENST00000559061 MRGPRX2Q96LB1 330 aa11.5□□□□□ -0.57
SNX1-204ENST00000559061 FCRL5Q96RD9 977 aa11.5□□□□□ -0.57
SNX1-204ENST00000559061 OSBPL9Q96SU4 736 aa11.5□□□□□ -0.57
SNX1-204ENST00000559061 MYOCQ99972 504 aa11.5□□□□□ -0.57
SNX1-204ENST00000559061 GBA3Q9H227 469 aa11.5□□□□□ -0.57
SNX1-204ENST00000559061 GPR27Q9NS67 375 aa11.5□□□□□ -0.57
SNX1-204ENST00000559061 UBP1Q9NZI7 540 aa11.5□□□□□ -0.57
SNX1-204ENST00000559061 SNX12Q9UMY4 172 aa11.5□□□□□ -0.57
SNX1-204ENST00000559061 PIEZO1Q92508 2521 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 A0A0J9YYE9 177 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 A8MX80 341 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 CDX4O14627 284 aaPredicted RBP11.49□□□□□ -0.57
SNX1-204ENST00000559061 BCAT2O15382 392 aaPredicted RBP11.49□□□□□ -0.57
SNX1-204ENST00000559061 SLC31A1O15431 190 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 TSPAN6O43657 245 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms