RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 SYBUQ9NX95 663 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 DKK3Q9UBP4 350 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 CKAP5Q14008 2032 aa18.19■□□□□ 0.5
CLPX-203ENST00000558958 A0A1W2PQF6 199 aa18.19■□□□□ 0.5
CLPX-203ENST00000558958 TSPAN11A1L157 253 aa18.19■□□□□ 0.5
CLPX-203ENST00000558958 CPP00450 1065 aa18.19■□□□□ 0.5
CLPX-203ENST00000558958 HOXB2P14652 356 aa18.19■□□□□ 0.5
CLPX-203ENST00000558958 ELK3P41970 407 aa18.19■□□□□ 0.5
CLPX-203ENST00000558958 EPHB1P54762 984 aa18.19■□□□□ 0.5
CLPX-203ENST00000558958 CRADDP78560 199 aa18.19■□□□□ 0.5
CLPX-203ENST00000558958 UBXN2BQ14CS0 331 aa18.19■□□□□ 0.5
CLPX-203ENST00000558958 TJAP1Q5JTD0 557 aa18.19■□□□□ 0.5
CLPX-203ENST00000558958 BEND6Q5SZJ8 279 aaPredicted RBP18.19■□□□□ 0.5
CLPX-203ENST00000558958 FBXO38Q6PIJ6 1188 aa18.19■□□□□ 0.5
CLPX-203ENST00000558958 IGDCC3Q8IVU1 814 aa18.19■□□□□ 0.5
CLPX-203ENST00000558958 PAF1Q8N7H5 531 aa18.19■□□□□ 0.5
CLPX-203ENST00000558958 ERLEC1Q96DZ1 483 aa18.19■□□□□ 0.5
CLPX-203ENST00000558958 RSPH9Q9H1X1 276 aaPredicted RBP18.19■□□□□ 0.5
CLPX-203ENST00000558958 LMAN1LQ9HAT1 526 aa18.19■□□□□ 0.5
CLPX-203ENST00000558958 CD248Q9HCU0 757 aa18.19■□□□□ 0.5
CLPX-203ENST00000558958 MMP17Q9ULZ9 603 aa18.19■□□□□ 0.5
CLPX-203ENST00000558958 PHTF1Q9UMS5 762 aa18.19■□□□□ 0.5
CLPX-203ENST00000558958 PPIL1Q9Y3C6 166 aa18.19■□□□□ 0.5
CLPX-203ENST00000558958 FAM170BA6NMN3 283 aa18.18■□□□□ 0.5
CLPX-203ENST00000558958 SLC8A1P32418 973 aa18.18■□□□□ 0.5
CLPX-203ENST00000558958 ZXDAP98168 799 aa18.18■□□□□ 0.5
CLPX-203ENST00000558958 POU6F1Q14863 301 aa18.18■□□□□ 0.5
CLPX-203ENST00000558958 CCDC38Q502W7 563 aa18.18■□□□□ 0.5
CLPX-203ENST00000558958 EOGTQ5NDL2 527 aa18.18■□□□□ 0.5
CLPX-203ENST00000558958 CFAP58Q5T655 872 aa18.18■□□□□ 0.5
CLPX-203ENST00000558958 DENND2CQ68D51 928 aa18.18■□□□□ 0.5
CLPX-203ENST00000558958 PKN3Q6P5Z2 889 aa18.18■□□□□ 0.5
CLPX-203ENST00000558958 Q6ZS52 159 aa18.18■□□□□ 0.5
CLPX-203ENST00000558958 ANKMY2Q8IV38 441 aa18.18■□□□□ 0.5
CLPX-203ENST00000558958 MMAAQ8IVH4 418 aaKnown RBP18.18■□□□□ 0.5
CLPX-203ENST00000558958 FBXO36Q8NEA4 188 aa18.18■□□□□ 0.5
CLPX-203ENST00000558958 OR2T3Q8NH03 318 aa18.18■□□□□ 0.5
CLPX-203ENST00000558958 PYROXD1Q8WU10 500 aa18.18■□□□□ 0.5
CLPX-203ENST00000558958 SMIM14Q96QK8 99 aa18.18■□□□□ 0.5
CLPX-203ENST00000558958 EBNA1BP2Q99848 306 aaKnown RBP18.18■□□□□ 0.5
CLPX-203ENST00000558958 FOXQ1Q9C009 403 aa18.18■□□□□ 0.5
CLPX-203ENST00000558958 TBC1D17Q9HA65 648 aa18.18■□□□□ 0.5
CLPX-203ENST00000558958 FBRSQ9HAH7 460 aa18.18■□□□□ 0.5
CLPX-203ENST00000558958 CHMP2BQ9UQN3 213 aa18.18■□□□□ 0.5
CLPX-203ENST00000558958 MAD1L1Q9Y6D9 718 aa18.18■□□□□ 0.5
CLPX-203ENST00000558958 A0A0J9YYE9 177 aa18.17■□□□□ 0.5
CLPX-203ENST00000558958 C1QTNF3-AMACRE9PGA6 284 aa18.17■□□□□ 0.5
CLPX-203ENST00000558958 KPNA3O00505 521 aaPredicted RBP18.17■□□□□ 0.5
CLPX-203ENST00000558958 IL1BP01584 269 aa18.17■□□□□ 0.5
CLPX-203ENST00000558958 TRBC1P01850 177 aa18.17■□□□□ 0.5
CLPX-203ENST00000558958 PRKCGP05129 697 aa18.17■□□□□ 0.5
CLPX-203ENST00000558958 COL9A1P20849 921 aa18.17■□□□□ 0.5
CLPX-203ENST00000558958 ITGB7P26010 798 aa18.17■□□□□ 0.5
CLPX-203ENST00000558958 METAP1P53582 386 aa18.17■□□□□ 0.5
CLPX-203ENST00000558958 COPAP53621 1224 aa18.17■□□□□ 0.5
CLPX-203ENST00000558958 PMS2P54278 862 aa18.17■□□□□ 0.5
CLPX-203ENST00000558958 POLR2LP62875 67 aaKnown RBP18.17■□□□□ 0.5
CLPX-203ENST00000558958 SATB1Q01826 763 aa18.17■□□□□ 0.5
CLPX-203ENST00000558958 POM121L1PQ3SYA9 428 aa18.17■□□□□ 0.5
CLPX-203ENST00000558958 PCID2Q5JVF3 399 aa18.17■□□□□ 0.5
CLPX-203ENST00000558958 ARMC3Q5W041 872 aa18.17■□□□□ 0.5
CLPX-203ENST00000558958 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.17■□□□□ 0.5
CLPX-203ENST00000558958 STAMBPL1Q96FJ0 436 aa18.17■□□□□ 0.5
CLPX-203ENST00000558958 C9orf72Q96LT7 481 aa18.17■□□□□ 0.5
CLPX-203ENST00000558958 RANBP9Q96S59 729 aa18.17■□□□□ 0.5
CLPX-203ENST00000558958 CDC42EP4Q9H3Q1 356 aaKnown RBP18.17■□□□□ 0.5
CLPX-203ENST00000558958 SEMA4AQ9H3S1 761 aa18.17■□□□□ 0.5
CLPX-203ENST00000558958 SPO11Q9Y5K1 396 aa18.17■□□□□ 0.5
CLPX-203ENST00000558958 MAGEB16A2A368 324 aa18.16■□□□□ 0.5
CLPX-203ENST00000558958 C16orf96A6NNT2 1141 aa18.16■□□□□ 0.5
CLPX-203ENST00000558958 CHURC1-FNTBB4DL54 471 aa18.16■□□□□ 0.5
CLPX-203ENST00000558958 RNASEH1O60930 286 aaKnown RBP18.16■□□□□ 0.5
CLPX-203ENST00000558958 PIRTP0C851 137 aa18.16■□□□□ 0.5
CLPX-203ENST00000558958 TIMP2P16035 220 aa18.16■□□□□ 0.5
CLPX-203ENST00000558958 CTPS1P17812 591 aa18.16■□□□□ 0.5
CLPX-203ENST00000558958 ADRA1DP25100 572 aa18.16■□□□□ 0.5
CLPX-203ENST00000558958 UGP2Q16851 508 aa18.16■□□□□ 0.5
CLPX-203ENST00000558958 FAM46CQ5VWP2 391 aa18.16■□□□□ 0.5
CLPX-203ENST00000558958 CASC4Q6P4E1 433 aa18.16■□□□□ 0.5
CLPX-203ENST00000558958 TRMT10CQ7L0Y3 403 aaKnown RBP18.16■□□□□ 0.5
CLPX-203ENST00000558958 MREGQ8N565 214 aa18.16■□□□□ 0.5
CLPX-203ENST00000558958 BRSK1Q8TDC3 778 aa18.16■□□□□ 0.5
CLPX-203ENST00000558958 BLOC1S5Q8TDH9 187 aa18.16■□□□□ 0.5
CLPX-203ENST00000558958 PTCD2Q8WV60 388 aaKnown RBP18.16■□□□□ 0.5
CLPX-203ENST00000558958 ANKRD7Q92527 254 aa18.16■□□□□ 0.5
CLPX-203ENST00000558958 ARRDC3Q96B67 414 aa18.16■□□□□ 0.5
CLPX-203ENST00000558958 SCRN2Q96FV2 425 aa18.16■□□□□ 0.5
CLPX-203ENST00000558958 PPP1R16AQ96I34 528 aa18.16■□□□□ 0.5
CLPX-203ENST00000558958 MCCC1Q96RQ3 725 aaPredicted RBP18.16■□□□□ 0.5
CLPX-203ENST00000558958 NAT9Q9BTE0 207 aa18.16■□□□□ 0.5
CLPX-203ENST00000558958 KIFC1Q9BW19 673 aa18.16■□□□□ 0.5
CLPX-203ENST00000558958 OSBPL6Q9BZF3 934 aa18.16■□□□□ 0.5
CLPX-203ENST00000558958 MKRN2Q9H000 416 aaKnown RBP18.16■□□□□ 0.5
CLPX-203ENST00000558958 MAGEE1Q9HCI5 957 aa18.16■□□□□ 0.5
CLPX-203ENST00000558958 ARFGAP3Q9NP61 516 aa18.16■□□□□ 0.5
CLPX-203ENST00000558958 NINJ2Q9NZG7 142 aa18.16■□□□□ 0.5
CLPX-203ENST00000558958 SAMD15Q9P1V8 674 aa18.16■□□□□ 0.5
CLPX-203ENST00000558958 ZC3H7BQ9UGR2 993 aaKnown RBP18.16■□□□□ 0.5
CLPX-203ENST00000558958 SOX13Q9UN79 622 aa18.16■□□□□ 0.5
CLPX-203ENST00000558958 VCANP13611 3396 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms