RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 VOPP1Q96AW1 172 aa14.57□□□□□ -0.08
ARHGEF40-208ENST00000557498 ATP6V1G3Q96LB4 118 aa14.57□□□□□ -0.08
ARHGEF40-208ENST00000557498 ZNF778Q96MU6 729 aa14.57□□□□□ -0.08
ARHGEF40-208ENST00000557498 PAFAH2Q99487 392 aa14.57□□□□□ -0.08
ARHGEF40-208ENST00000557498 CPEB1Q9BZB8 566 aaKnown RBP14.57□□□□□ -0.08
ARHGEF40-208ENST00000557498 SMYD2Q9NRG4 433 aa14.57□□□□□ -0.08
ARHGEF40-208ENST00000557498 TREX1Q9NSU2 369 aa14.57□□□□□ -0.08
ARHGEF40-208ENST00000557498 OGFRQ9NZT2 677 aa14.57□□□□□ -0.08
ARHGEF40-208ENST00000557498 PSMC3IPQ9P2W1 217 aaPredicted RBP14.57□□□□□ -0.08
ARHGEF40-208ENST00000557498 RPL26L1Q9UNX3 145 aaKnown RBP14.57□□□□□ -0.08
ARHGEF40-208ENST00000557498 PLA2G4CQ9UP65 541 aa14.57□□□□□ -0.08
ARHGEF40-208ENST00000557498 PCDHB9Q9Y5E1 797 aa14.57□□□□□ -0.08
ARHGEF40-208ENST00000557498 SPO11Q9Y5K1 396 aa14.57□□□□□ -0.08
ARHGEF40-208ENST00000557498 TRANK1O15050 2925 aa14.57□□□□□ -0.08
ARHGEF40-208ENST00000557498 LAMA2P24043 3122 aaKnown RBP14.57□□□□□ -0.08
ARHGEF40-208ENST00000557498 TRIOBPQ9H2D6 2365 aa14.56□□□□□ -0.08
ARHGEF40-208ENST00000557498 RANBP2P49792 3224 aaKnown RBP14.56□□□□□ -0.08
ARHGEF40-208ENST00000557498 CCDC78A2IDD5 438 aa14.56□□□□□ -0.08
ARHGEF40-208ENST00000557498 MROH6A6NGR9 719 aa14.56□□□□□ -0.08
ARHGEF40-208ENST00000557498 CXorf49A8MYA2 514 aaPredicted RBP14.56□□□□□ -0.08
ARHGEF40-208ENST00000557498 HMGB1P1B2RPK0 211 aaPredicted RBP14.56□□□□□ -0.08
ARHGEF40-208ENST00000557498 ANKRD66B4E2M5 251 aa14.56□□□□□ -0.08
ARHGEF40-208ENST00000557498 PAMP19021 973 aa14.56□□□□□ -0.08
ARHGEF40-208ENST00000557498 GRIA2P42262 883 aa14.56□□□□□ -0.08
ARHGEF40-208ENST00000557498 MSH2P43246 934 aa14.56□□□□□ -0.08
ARHGEF40-208ENST00000557498 SOX9P48436 509 aa14.56□□□□□ -0.08
ARHGEF40-208ENST00000557498 EPHB1P54762 984 aa14.56□□□□□ -0.08
ARHGEF40-208ENST00000557498 TMED2Q15363 201 aa14.56□□□□□ -0.08
ARHGEF40-208ENST00000557498 SMAD2Q15796 467 aaKnown RBP14.56□□□□□ -0.08
ARHGEF40-208ENST00000557498 LEXMQ3ZCV2 418 aa14.56□□□□□ -0.08
ARHGEF40-208ENST00000557498 FNDC3BQ53EP0 1204 aaKnown RBP14.56□□□□□ -0.08
ARHGEF40-208ENST00000557498 TNFAIP8L3Q5GJ75 292 aa14.56□□□□□ -0.08
ARHGEF40-208ENST00000557498 KIAA0930Q6ICG6 404 aaPredicted RBP14.56□□□□□ -0.08
ARHGEF40-208ENST00000557498 ESRP1Q6NXG1 681 aaKnown RBP14.56□□□□□ -0.08
ARHGEF40-208ENST00000557498 SFTPA1Q8IWL2 248 aa14.56□□□□□ -0.08
ARHGEF40-208ENST00000557498 SUGP1Q8IWZ8 645 aaKnown RBP14.56□□□□□ -0.08
ARHGEF40-208ENST00000557498 CTAGE3PQ8IX95 158 aa14.56□□□□□ -0.08
ARHGEF40-208ENST00000557498 PPM1NQ8N819 430 aa14.56□□□□□ -0.08
ARHGEF40-208ENST00000557498 BRSK1Q8TDC3 778 aa14.56□□□□□ -0.08
ARHGEF40-208ENST00000557498 DCAKDQ8WVC6 231 aa14.56□□□□□ -0.08
ARHGEF40-208ENST00000557498 PIH1D2Q8WWB5 315 aa14.56□□□□□ -0.08
ARHGEF40-208ENST00000557498 CDKL2Q92772 493 aa14.56□□□□□ -0.08
ARHGEF40-208ENST00000557498 ZNF641Q96N77 438 aaPredicted RBP14.56□□□□□ -0.08
ARHGEF40-208ENST00000557498 HEPHQ9BQS7 1158 aa14.56□□□□□ -0.08
ARHGEF40-208ENST00000557498 STMN4Q9H169 189 aaPredicted RBP14.56□□□□□ -0.08
ARHGEF40-208ENST00000557498 ZDHHC6Q9H6R6 413 aa14.56□□□□□ -0.08
ARHGEF40-208ENST00000557498 TRPV5Q9NQA5 729 aa14.56□□□□□ -0.08
ARHGEF40-208ENST00000557498 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.56□□□□□ -0.08
ARHGEF40-208ENST00000557498 BCCIPQ9P287 314 aaKnown RBP eCLIP14.56□□□□□ -0.08
ARHGEF40-208ENST00000557498 RIMKLBQ9ULI2 386 aa14.56□□□□□ -0.08
ARHGEF40-208ENST00000557498 A0A1W2PQ67 120 aa14.55□□□□□ -0.08
ARHGEF40-208ENST00000557498 LDB2O43679 373 aa14.55□□□□□ -0.08
ARHGEF40-208ENST00000557498 PIAS1O75925 651 aa14.55□□□□□ -0.08
ARHGEF40-208ENST00000557498 CRTAMO95727 393 aa14.55□□□□□ -0.08
ARHGEF40-208ENST00000557498 INHBAP08476 426 aa14.55□□□□□ -0.08
ARHGEF40-208ENST00000557498 PIRTP0C851 137 aa14.55□□□□□ -0.08
ARHGEF40-208ENST00000557498 ERVK-10P10266 1014 aa14.55□□□□□ -0.08
ARHGEF40-208ENST00000557498 ATP5DP30049 168 aa14.55□□□□□ -0.08
ARHGEF40-208ENST00000557498 TAF1AQ15573 450 aaPredicted RBP14.55□□□□□ -0.08
ARHGEF40-208ENST00000557498 KCTD16Q68DU8 428 aa14.55□□□□□ -0.08
ARHGEF40-208ENST00000557498 ADGRD1Q6QNK2 874 aa14.55□□□□□ -0.08
ARHGEF40-208ENST00000557498 GDPD4Q6W3E5 623 aa14.55□□□□□ -0.08
ARHGEF40-208ENST00000557498 NUDT18Q6ZVK8 323 aa14.55□□□□□ -0.08
ARHGEF40-208ENST00000557498 GLT6D1Q7Z4J2 308 aa14.55□□□□□ -0.08
ARHGEF40-208ENST00000557498 KCNMB4Q86W47 210 aa14.55□□□□□ -0.08
ARHGEF40-208ENST00000557498 LRRC6Q86X45 466 aa14.55□□□□□ -0.08
ARHGEF40-208ENST00000557498 DEFB123Q8N688 67 aa14.55□□□□□ -0.08
ARHGEF40-208ENST00000557498 PAF1Q8N7H5 531 aa14.55□□□□□ -0.08
ARHGEF40-208ENST00000557498 DNASE1L2Q92874 299 aa14.55□□□□□ -0.08
ARHGEF40-208ENST00000557498 PTPRN2Q92932 1015 aa14.55□□□□□ -0.08
ARHGEF40-208ENST00000557498 PEX13Q92968 403 aa14.55□□□□□ -0.08
ARHGEF40-208ENST00000557498 TLCD1Q96CP7 247 aa14.55□□□□□ -0.08
ARHGEF40-208ENST00000557498 ECHDC3Q96DC8 303 aa14.55□□□□□ -0.08
ARHGEF40-208ENST00000557498 MRRFQ96E11 262 aaKnown RBP14.55□□□□□ -0.08
ARHGEF40-208ENST00000557498 P2RY13Q9BPV8 354 aa14.55□□□□□ -0.08
ARHGEF40-208ENST00000557498 TMEM245Q9H330 911 aa14.55□□□□□ -0.08
ARHGEF40-208ENST00000557498 SUV39H2Q9H5I1 410 aa14.55□□□□□ -0.08
ARHGEF40-208ENST00000557498 KCNK12Q9HB15 430 aa14.55□□□□□ -0.08
ARHGEF40-208ENST00000557498 PPANQ9NQ55 473 aaKnown RBP14.55□□□□□ -0.08
ARHGEF40-208ENST00000557498 C20orf96Q9NUD7 363 aaPredicted RBP14.55□□□□□ -0.08
ARHGEF40-208ENST00000557498 HACD3Q9P035 362 aa14.55□□□□□ -0.08
ARHGEF40-208ENST00000557498 LIMD1Q9UGP4 676 aa14.55□□□□□ -0.08
ARHGEF40-208ENST00000557498 SLC2A6Q9UGQ3 507 aa14.55□□□□□ -0.08
ARHGEF40-208ENST00000557498 NOVA2Q9UNW9 492 aaKnown RBP14.55□□□□□ -0.08
ARHGEF40-208ENST00000557498 IKBKGQ9Y6K9 419 aa14.55□□□□□ -0.08
ARHGEF40-208ENST00000557498 EDDM13A0A1B0GTR0 161 aa14.54□□□□□ -0.08
ARHGEF40-208ENST00000557498 UGT2B4P06133 528 aa14.54□□□□□ -0.08
ARHGEF40-208ENST00000557498 ARNTP27540 789 aa14.54□□□□□ -0.08
ARHGEF40-208ENST00000557498 SLC8A1P32418 973 aa14.54□□□□□ -0.08
ARHGEF40-208ENST00000557498 CTHP32929 405 aa14.54□□□□□ -0.08
ARHGEF40-208ENST00000557498 ARCN1P48444 511 aaKnown RBP14.54□□□□□ -0.08
ARHGEF40-208ENST00000557498 ACVR1Q04771 509 aa14.54□□□□□ -0.08
ARHGEF40-208ENST00000557498 ZNF234Q14588 700 aa14.54□□□□□ -0.08
ARHGEF40-208ENST00000557498 SMAD1Q15797 465 aaKnown RBP14.54□□□□□ -0.08
ARHGEF40-208ENST00000557498 HNRNPA1L2Q32P51 320 aaKnown RBP14.54□□□□□ -0.08
ARHGEF40-208ENST00000557498 PDPK2PQ6A1A2 396 aa14.54□□□□□ -0.08
ARHGEF40-208ENST00000557498 SLC26A11Q86WA9 606 aa14.54□□□□□ -0.08
ARHGEF40-208ENST00000557498 ZSWIM9Q86XI8 627 aa14.54□□□□□ -0.08
ARHGEF40-208ENST00000557498 CYP4X1Q8N118 509 aa14.54□□□□□ -0.08
ARHGEF40-208ENST00000557498 SLC44A3Q8N4M1 653 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms