RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 LRRN4Q8WUT4 740 aa23.03■■□□□ 1.28
TDP1-216ENST00000556867 KLHDC7BQ96G42 594 aa23.03■■□□□ 1.28
TDP1-216ENST00000556867 ELF4Q99607 663 aaPredicted RBP23.03■■□□□ 1.28
TDP1-216ENST00000556867 KLF6Q99612 283 aaPredicted RBP23.03■■□□□ 1.28
TDP1-216ENST00000556867 SEMA3CQ99985 751 aa23.03■■□□□ 1.28
TDP1-216ENST00000556867 WRAP53Q9BUR4 548 aaKnown RBP23.03■■□□□ 1.28
TDP1-216ENST00000556867 BRD8Q9H0E9 1235 aa23.03■■□□□ 1.28
TDP1-216ENST00000556867 TRIM10Q9UDY6 481 aa23.03■■□□□ 1.28
TDP1-216ENST00000556867 PCDHGC4Q9Y5F7 938 aa23.03■■□□□ 1.28
TDP1-216ENST00000556867 A0A0U1RQJ8 604 aa23.02■■□□□ 1.28
TDP1-216ENST00000556867 A0A1B0GTQ1 180 aa23.02■■□□□ 1.28
TDP1-216ENST00000556867 MACROD2A1Z1Q3 448 aa23.02■■□□□ 1.28
TDP1-216ENST00000556867 CCDC66A2RUB6 948 aa23.02■■□□□ 1.28
TDP1-216ENST00000556867 A6NNZ2 444 aa23.02■■□□□ 1.28
TDP1-216ENST00000556867 KCNK3O14649 394 aa23.02■■□□□ 1.28
TDP1-216ENST00000556867 PPP1R12AO14974 1030 aaPredicted RBP23.02■■□□□ 1.28
TDP1-216ENST00000556867 ARHGAP6O43182 974 aa23.02■■□□□ 1.28
TDP1-216ENST00000556867 CST8O60676 142 aa23.02■■□□□ 1.28
TDP1-216ENST00000556867 TM7SF2O76062 418 aa23.02■■□□□ 1.28
TDP1-216ENST00000556867 TGM2P21980 687 aa23.02■■□□□ 1.28
TDP1-216ENST00000556867 CES1P23141 567 aa23.02■■□□□ 1.28
TDP1-216ENST00000556867 NR2C2P49116 596 aa23.02■■□□□ 1.28
TDP1-216ENST00000556867 NOVA1P51513 510 aaKnown RBP23.02■■□□□ 1.28
TDP1-216ENST00000556867 CLDN2P57739 230 aa23.02■■□□□ 1.28
TDP1-216ENST00000556867 IFI35P80217 286 aaPredicted RBP23.02■■□□□ 1.28
TDP1-216ENST00000556867 TRAF2Q12933 501 aa23.02■■□□□ 1.28
TDP1-216ENST00000556867 KYAT3Q6YP21 454 aaKnown RBP23.02■■□□□ 1.28
TDP1-216ENST00000556867 OXR1Q8N573 874 aa23.02■■□□□ 1.28
TDP1-216ENST00000556867 DEFB124Q8NES8 71 aa23.02■■□□□ 1.28
TDP1-216ENST00000556867 IL12RB2Q99665 862 aa23.02■■□□□ 1.28
TDP1-216ENST00000556867 SLC32A1Q9H598 525 aa23.02■■□□□ 1.28
TDP1-216ENST00000556867 ADGRG1Q9Y653 693 aa23.02■■□□□ 1.28
TDP1-216ENST00000556867 PCDHGA12O60330 932 aa23.01■■□□□ 1.27
TDP1-216ENST00000556867 NEBLO76041 1014 aa23.01■■□□□ 1.27
TDP1-216ENST00000556867 PRKCGP05129 697 aa23.01■■□□□ 1.27
TDP1-216ENST00000556867 HLA-DQB2P05538 268 aa23.01■■□□□ 1.27
TDP1-216ENST00000556867 THEGLP0DJG4 465 aa23.01■■□□□ 1.27
TDP1-216ENST00000556867 CEACAM1P13688 526 aa23.01■■□□□ 1.27
TDP1-216ENST00000556867 COPS2P61201 443 aa23.01■■□□□ 1.27
TDP1-216ENST00000556867 KAZNQ674X7 775 aa23.01■■□□□ 1.27
TDP1-216ENST00000556867 PSAPL1Q6NUJ1 521 aa23.01■■□□□ 1.27
TDP1-216ENST00000556867 DBX2Q6ZNG2 339 aa23.01■■□□□ 1.27
TDP1-216ENST00000556867 BZW1Q7L1Q6 419 aaKnown RBP23.01■■□□□ 1.27
TDP1-216ENST00000556867 CCDC50Q8IVM0 306 aa23.01■■□□□ 1.27
TDP1-216ENST00000556867 NAXDQ8IW45 347 aa23.01■■□□□ 1.27
TDP1-216ENST00000556867 OR13H1Q8NG92 308 aa23.01■■□□□ 1.27
TDP1-216ENST00000556867 BMFQ96LC9 184 aa23.01■■□□□ 1.27
TDP1-216ENST00000556867 C1QTNF7Q9BXJ2 289 aa23.01■■□□□ 1.27
TDP1-216ENST00000556867 GRPEL1Q9HAV7 217 aa23.01■■□□□ 1.27
TDP1-216ENST00000556867 GPR27Q9NS67 375 aa23.01■■□□□ 1.27
TDP1-216ENST00000556867 NCOR2Q9Y618 2525 aa23.01■■□□□ 1.27
TDP1-216ENST00000556867 CFAP69A5D8W1 941 aa23■■□□□ 1.27
TDP1-216ENST00000556867 KCNK1O00180 336 aa23■■□□□ 1.27
TDP1-216ENST00000556867 YKT6O15498 198 aa23■■□□□ 1.27
TDP1-216ENST00000556867 CPP00450 1065 aa23■■□□□ 1.27
TDP1-216ENST00000556867 DSC2Q02487 901 aa23■■□□□ 1.27
TDP1-216ENST00000556867 ADCY2Q08462 1091 aa23■■□□□ 1.27
TDP1-216ENST00000556867 ITKQ08881 620 aa23■■□□□ 1.27
TDP1-216ENST00000556867 AP1B1Q10567 949 aa23■■□□□ 1.27
TDP1-216ENST00000556867 RALGDSQ12967 914 aa23■■□□□ 1.27
TDP1-216ENST00000556867 DPPA4Q7L190 304 aa23■■□□□ 1.27
TDP1-216ENST00000556867 NT5DC3Q86UY8 548 aa23■■□□□ 1.27
TDP1-216ENST00000556867 SYCE1Q8N0S2 351 aa23■■□□□ 1.27
TDP1-216ENST00000556867 CENPTQ96BT3 561 aa23■■□□□ 1.27
TDP1-216ENST00000556867 PCDHB9Q9Y5E1 797 aa23■■□□□ 1.27
TDP1-216ENST00000556867 POM121BA6NF01 834 aa22.99■■□□□ 1.27
TDP1-216ENST00000556867 FPGTO14772 594 aa22.99■■□□□ 1.27
TDP1-216ENST00000556867 GIPC1O14908 333 aa22.99■■□□□ 1.27
TDP1-216ENST00000556867 FLRT2O43155 660 aa22.99■■□□□ 1.27
TDP1-216ENST00000556867 SH3BP5O60239 455 aa22.99■■□□□ 1.27
TDP1-216ENST00000556867 PGLSO95336 258 aa22.99■■□□□ 1.27
TDP1-216ENST00000556867 JCHAINP01591 159 aa22.99■■□□□ 1.27
TDP1-216ENST00000556867 C6P13671 934 aa22.99■■□□□ 1.27
TDP1-216ENST00000556867 PECAM1P16284 738 aaPredicted RBP22.99■■□□□ 1.27
TDP1-216ENST00000556867 KCNA4P22459 653 aa22.99■■□□□ 1.27
TDP1-216ENST00000556867 PTPN7P35236 360 aa22.99■■□□□ 1.27
TDP1-216ENST00000556867 RXRGP48443 463 aa22.99■■□□□ 1.27
TDP1-216ENST00000556867 ARRB1P49407 418 aaPredicted RBP22.99■■□□□ 1.27
TDP1-216ENST00000556867 LIG3P49916 1009 aa22.99■■□□□ 1.27
TDP1-216ENST00000556867 PEX5P50542 639 aa22.99■■□□□ 1.27
TDP1-216ENST00000556867 FAM193AP78312 1265 aa22.99■■□□□ 1.27
TDP1-216ENST00000556867 FOXK2Q01167 660 aa22.99■■□□□ 1.27
TDP1-216ENST00000556867 ZBTB17Q13105 803 aa22.99■■□□□ 1.27
TDP1-216ENST00000556867 SUZ12Q15022 739 aaKnown RBP22.99■■□□□ 1.27
TDP1-216ENST00000556867 AGERQ15109 404 aa22.99■■□□□ 1.27
TDP1-216ENST00000556867 PRKD1Q15139 912 aaPredicted RBP22.99■■□□□ 1.27
TDP1-216ENST00000556867 LLGL1Q15334 1064 aa22.99■■□□□ 1.27
TDP1-216ENST00000556867 SHBQ15464 509 aa22.99■■□□□ 1.27
TDP1-216ENST00000556867 BBS12Q6ZW61 710 aa22.99■■□□□ 1.27
TDP1-216ENST00000556867 PTAR1Q7Z6K3 402 aaPredicted RBP22.99■■□□□ 1.27
TDP1-216ENST00000556867 DCP2Q8IU60 420 aaKnown RBP22.99■■□□□ 1.27
TDP1-216ENST00000556867 LRRC8AQ8IWT6 810 aa22.99■■□□□ 1.27
TDP1-216ENST00000556867 ARRDC2Q8TBH0 407 aa22.99■■□□□ 1.27
TDP1-216ENST00000556867 PDCD6IPQ8WUM4 868 aaKnown RBP22.99■■□□□ 1.27
TDP1-216ENST00000556867 TSGA10Q9BZW7 698 aa22.99■■□□□ 1.27
TDP1-216ENST00000556867 SAE1Q9UBE0 346 aaPredicted RBP22.99■■□□□ 1.27
TDP1-216ENST00000556867 PHTF1Q9UMS5 762 aa22.99■■□□□ 1.27
TDP1-216ENST00000556867 TTLL3Q9Y4R7 772 aa22.99■■□□□ 1.27
TDP1-216ENST00000556867 RAI2Q9Y5P3 530 aa22.99■■□□□ 1.27
TDP1-216ENST00000556867 IGFALSP35858 605 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms