RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 ZFXP17010 805 aaPredicted RBP11.61□□□□□ -0.55
SLIRP-206ENST00000556375 ITIH2P19823 946 aa11.61□□□□□ -0.55
SLIRP-206ENST00000556375 RABIFP47224 123 aa11.61□□□□□ -0.55
SLIRP-206ENST00000556375 VAV2P52735 878 aa11.61□□□□□ -0.55
SLIRP-206ENST00000556375 POLR2LP62875 67 aaKnown RBP11.61□□□□□ -0.55
SLIRP-206ENST00000556375 FAM193AP78312 1265 aa11.61□□□□□ -0.55
SLIRP-206ENST00000556375 PPIDQ08752 370 aaKnown RBP11.61□□□□□ -0.55
SLIRP-206ENST00000556375 SLC10A2Q12908 348 aaPredicted RBP11.61□□□□□ -0.55
SLIRP-206ENST00000556375 TRIP6Q15654 476 aaKnown RBP11.61□□□□□ -0.55
SLIRP-206ENST00000556375 TAZQ16635 292 aa11.61□□□□□ -0.55
SLIRP-206ENST00000556375 PRAMEF14Q5SWL7 426 aa11.61□□□□□ -0.55
SLIRP-206ENST00000556375 MFSD7Q6UXD7 560 aa11.61□□□□□ -0.55
SLIRP-206ENST00000556375 GLRX5Q86SX6 157 aa11.61□□□□□ -0.55
SLIRP-206ENST00000556375 CCDC13Q8IYE1 715 aa11.61□□□□□ -0.55
SLIRP-206ENST00000556375 KATNAL2Q8IYT4 538 aa11.61□□□□□ -0.55
SLIRP-206ENST00000556375 SLC22A18ASQ8N1D0 253 aa11.61□□□□□ -0.55
SLIRP-206ENST00000556375 SPC24Q8NBT2 197 aa11.61□□□□□ -0.55
SLIRP-206ENST00000556375 ACRBPQ8NEB7 543 aa11.61□□□□□ -0.55
SLIRP-206ENST00000556375 TPCN2Q8NHX9 752 aa11.61□□□□□ -0.55
SLIRP-206ENST00000556375 SAP25Q8TEE9 199 aa11.61□□□□□ -0.55
SLIRP-206ENST00000556375 RNF25Q96BH1 459 aaPredicted RBP11.61□□□□□ -0.55
SLIRP-206ENST00000556375 BMFQ96LC9 184 aa11.61□□□□□ -0.55
SLIRP-206ENST00000556375 CDC6Q99741 560 aa11.61□□□□□ -0.55
SLIRP-206ENST00000556375 MAK16Q9BXY0 300 aaKnown RBP11.61□□□□□ -0.55
SLIRP-206ENST00000556375 POLR1EQ9GZS1 481 aaKnown RBP11.61□□□□□ -0.55
SLIRP-206ENST00000556375 NOD2Q9HC29 1040 aa11.61□□□□□ -0.55
SLIRP-206ENST00000556375 SALL4Q9UJQ4 1053 aa11.61□□□□□ -0.55
SLIRP-206ENST00000556375 BTBD3Q9Y2F9 522 aa11.61□□□□□ -0.55
SLIRP-206ENST00000556375 PCDHB9Q9Y5E1 797 aa11.61□□□□□ -0.55
SLIRP-206ENST00000556375 HEY1Q9Y5J3 304 aa11.61□□□□□ -0.55
SLIRP-206ENST00000556375 ARID1BQ8NFD5 2236 aaPredicted RBP11.61□□□□□ -0.55
SLIRP-206ENST00000556375 ACACBO00763 2458 aa11.61□□□□□ -0.55
SLIRP-206ENST00000556375 LRP4O75096 1905 aa11.6□□□□□ -0.55
SLIRP-206ENST00000556375 TTC24A2A3L6 582 aaPredicted RBP11.6□□□□□ -0.55
SLIRP-206ENST00000556375 PPP1R12AO14974 1030 aaPredicted RBP11.6□□□□□ -0.55
SLIRP-206ENST00000556375 PJA2O43164 708 aa11.6□□□□□ -0.55
SLIRP-206ENST00000556375 NEBLO76041 1014 aa11.6□□□□□ -0.55
SLIRP-206ENST00000556375 PRKCGP05129 697 aa11.6□□□□□ -0.55
SLIRP-206ENST00000556375 ITGAVP06756 1048 aa11.6□□□□□ -0.55
SLIRP-206ENST00000556375 CCNB1P14635 433 aa11.6□□□□□ -0.55
SLIRP-206ENST00000556375 NFKBIAP25963 317 aa11.6□□□□□ -0.55
SLIRP-206ENST00000556375 IGFALSP35858 605 aa11.6□□□□□ -0.55
SLIRP-206ENST00000556375 CDKN2BP42772 138 aa11.6□□□□□ -0.55
SLIRP-206ENST00000556375 MARCKSL1P49006 195 aa11.6□□□□□ -0.55
SLIRP-206ENST00000556375 PFN3P60673 137 aa11.6□□□□□ -0.55
SLIRP-206ENST00000556375 TRAF2Q12933 501 aa11.6□□□□□ -0.55
SLIRP-206ENST00000556375 RALGDSQ12967 914 aa11.6□□□□□ -0.55
SLIRP-206ENST00000556375 AGERQ15109 404 aa11.6□□□□□ -0.55
SLIRP-206ENST00000556375 PDK1Q15118 436 aa11.6□□□□□ -0.55
SLIRP-206ENST00000556375 Q6ZSR6 202 aa11.6□□□□□ -0.55
SLIRP-206ENST00000556375 DPPA4Q7L190 304 aa11.6□□□□□ -0.55
SLIRP-206ENST00000556375 DAAM2Q86T65 1068 aa11.6□□□□□ -0.55
SLIRP-206ENST00000556375 GATAD2AQ86YP4 633 aa11.6□□□□□ -0.55
SLIRP-206ENST00000556375 RFX6Q8HWS3 928 aa11.6□□□□□ -0.55
SLIRP-206ENST00000556375 TXLNBQ8N3L3 684 aa11.6□□□□□ -0.55
SLIRP-206ENST00000556375 TP53I13Q8NBR0 393 aaPredicted RBP11.6□□□□□ -0.55
SLIRP-206ENST00000556375 CCNYQ8ND76 341 aa11.6□□□□□ -0.55
SLIRP-206ENST00000556375 RHBDD1Q8TEB9 315 aa11.6□□□□□ -0.55
SLIRP-206ENST00000556375 CENPTQ96BT3 561 aa11.6□□□□□ -0.55
SLIRP-206ENST00000556375 IFT43Q96FT9 208 aa11.6□□□□□ -0.55
SLIRP-206ENST00000556375 OLFM3Q96PB7 478 aa11.6□□□□□ -0.55
SLIRP-206ENST00000556375 SEMA3CQ99985 751 aa11.6□□□□□ -0.55
SLIRP-206ENST00000556375 RBM22Q9NW64 420 aaKnown RBP eCLIP11.6□□□□□ -0.557e-6■■■□□ 17.4
SLIRP-206ENST00000556375 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.6□□□□□ -0.55
SLIRP-206ENST00000556375 PCDHGC4Q9Y5F7 938 aa11.6□□□□□ -0.55
SLIRP-206ENST00000556375 TPRP12270 2363 aaKnown RBP11.6□□□□□ -0.55
SLIRP-206ENST00000556375 TOR1BO14657 336 aa11.59□□□□□ -0.55
SLIRP-206ENST00000556375 PGLSO95336 258 aa11.59□□□□□ -0.55
SLIRP-206ENST00000556375 HLA-DQB2P05538 268 aa11.59□□□□□ -0.55
SLIRP-206ENST00000556375 ELFN1P0C7U0 828 aa11.59□□□□□ -0.55
SLIRP-206ENST00000556375 CES1P23141 567 aa11.59□□□□□ -0.55
SLIRP-206ENST00000556375 LIG3P49916 1009 aa11.59□□□□□ -0.55
SLIRP-206ENST00000556375 GSDMDP57764 484 aa11.59□□□□□ -0.55
SLIRP-206ENST00000556375 DYNLT1P63172 113 aa11.59□□□□□ -0.55
SLIRP-206ENST00000556375 IFI35P80217 286 aaPredicted RBP11.59□□□□□ -0.55
SLIRP-206ENST00000556375 SHC2P98077 582 aa11.59□□□□□ -0.55
SLIRP-206ENST00000556375 TFDP2Q14188 446 aa11.59□□□□□ -0.55
SLIRP-206ENST00000556375 LRRC14Q15048 493 aa11.59□□□□□ -0.55
SLIRP-206ENST00000556375 IRF4Q15306 451 aa11.59□□□□□ -0.55
SLIRP-206ENST00000556375 TFDP3Q5H9I0 405 aa11.59□□□□□ -0.55
SLIRP-206ENST00000556375 ARMC12Q5T9G4 340 aa11.59□□□□□ -0.55
SLIRP-206ENST00000556375 SPOCD1Q6ZMY3 1216 aa11.59□□□□□ -0.55
SLIRP-206ENST00000556375 KANSL1Q7Z3B3 1105 aa11.59□□□□□ -0.55
SLIRP-206ENST00000556375 KIAA1328Q86T90 577 aa11.59□□□□□ -0.55
SLIRP-206ENST00000556375 PARGQ86W56 976 aa11.59□□□□□ -0.55
SLIRP-206ENST00000556375 EXD1Q8NHP7 514 aa11.59□□□□□ -0.55
SLIRP-206ENST00000556375 PDCD6IPQ8WUM4 868 aaKnown RBP11.59□□□□□ -0.55
SLIRP-206ENST00000556375 RBM41Q96IZ5 413 aaKnown RBP11.59□□□□□ -0.55
SLIRP-206ENST00000556375 LGMNQ99538 433 aa11.59□□□□□ -0.55
SLIRP-206ENST00000556375 LACRTQ9GZZ8 138 aa11.59□□□□□ -0.55
SLIRP-206ENST00000556375 BRD8Q9H0E9 1235 aa11.59□□□□□ -0.55
SLIRP-206ENST00000556375 ANGPTL2Q9UKU9 493 aa11.59□□□□□ -0.55
SLIRP-206ENST00000556375 PHTF1Q9UMS5 762 aa11.59□□□□□ -0.55
SLIRP-206ENST00000556375 COQ6Q9Y2Z9 468 aa11.59□□□□□ -0.55
SLIRP-206ENST00000556375 TTLL3Q9Y4R7 772 aa11.59□□□□□ -0.55
SLIRP-206ENST00000556375 hCG_1818297A0A087WSY0 165 aa11.58□□□□□ -0.56
SLIRP-206ENST00000556375 SPTY2D1-AS1A0A0U1RR47 76 aa11.58□□□□□ -0.56
SLIRP-206ENST00000556375 KCNK1O00180 336 aa11.58□□□□□ -0.56
SLIRP-206ENST00000556375 LZTS3O60299 673 aaPredicted RBP11.58□□□□□ -0.56
SLIRP-206ENST00000556375 FZD6O60353 706 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms