RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 FOXP3Q9BZS1 431 aa7.01□□□□□ -1.29
ATXN3-236ENST00000556220 WNT10AQ9GZT5 417 aa7.01□□□□□ -1.29
ATXN3-236ENST00000556220 SYNDIG1Q9H7V2 258 aa7.01□□□□□ -1.29
ATXN3-236ENST00000556220 APOBEC3GQ9HC16 384 aaKnown RBP7.01□□□□□ -1.29
ATXN3-236ENST00000556220 ZNF71Q9NQZ8 489 aaPredicted RBP7.01□□□□□ -1.29
ATXN3-236ENST00000556220 ABCC13Q9NSE7 274 aa7.01□□□□□ -1.29
ATXN3-236ENST00000556220 FOXJ2Q9P0K8 574 aa7.01□□□□□ -1.29
ATXN3-236ENST00000556220 PADI4Q9UM07 663 aa7.01□□□□□ -1.29
ATXN3-236ENST00000556220 ZFR2Q9UPR6 939 aaKnown RBP7.01□□□□□ -1.29
ATXN3-236ENST00000556220 CTNND2Q9UQB3 1225 aa7.01□□□□□ -1.29
ATXN3-236ENST00000556220 LOXL2Q9Y4K0 774 aa7.01□□□□□ -1.29
ATXN3-236ENST00000556220 CELSR2Q9HCU4 2923 aa7.01□□□□□ -1.29
ATXN3-236ENST00000556220 UNC13CQ8NB66 2214 aa7.01□□□□□ -1.29
ATXN3-236ENST00000556220 F8P00451 2351 aa7.01□□□□□ -1.29
ATXN3-236ENST00000556220 A0A087X0B3 334 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 PRAMEF33A0A0G2JMD5 474 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 POM121BA6NF01 834 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7□□□□□ -1.29
ATXN3-236ENST00000556220 TULP2O00295 520 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 IKBKBO14920 756 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 XPO1O14980 1071 aaKnown RBP7□□□□□ -1.29
ATXN3-236ENST00000556220 MCF2LO15068 1137 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 ALOX15BO15296 676 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 MTSS1O43312 755 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 PRAMEF10O60809 474 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 GCATO75600 419 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 SLITRK5O94991 958 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 AGFG2O95081 481 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 LUC7L3O95232 432 aaKnown RBP7□□□□□ -1.29
ATXN3-236ENST00000556220 HLA-DRAP01903 254 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 CD58P19256 250 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 ELAVL4P26378 380 aaKnown RBP7□□□□□ -1.29
ATXN3-236ENST00000556220 RABIFP47224 123 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 ADKP55263 362 aaKnown RBP7□□□□□ -1.29
ATXN3-236ENST00000556220 TBX4P57082 545 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 DLG4P78352 724 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 CCL7P80098 99 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 EIF2B5Q13144 721 aaKnown RBP7□□□□□ -1.29
ATXN3-236ENST00000556220 CUL4AQ13619 759 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 SLC12A1Q13621 1099 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 SLBPQ14493 270 aaKnown RBP eCLIP7□□□□□ -1.29
ATXN3-236ENST00000556220 KCNMB1Q16558 191 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 ZNF394Q53GI3 561 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 MS4A13Q5J8X5 152 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 FAM26FQ5R3K3 315 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 FHL5Q5TD97 284 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 SEL1L3Q68CR1 1132 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 ESRP1Q6NXG1 681 aaKnown RBP7□□□□□ -1.29
ATXN3-236ENST00000556220 MSANTD2Q6P1R3 559 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 LRFN4Q6PJG9 635 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 KYAT3Q6YP21 454 aaKnown RBP7□□□□□ -1.29
ATXN3-236ENST00000556220 TICAM1Q8IUC6 712 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 CFAP52Q8N1V2 620 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 BTN2A2Q8WVV5 523 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 USP7Q93009 1102 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 PPP1R13BQ96KQ4 1090 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 SLC17A9Q9BYT1 436 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 LRRC27Q9C0I9 530 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 B3GNT4Q9C0J1 378 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 TNMDQ9H2S6 317 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 LRRC4Q9HBW1 653 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 DMAC2Q9NW81 257 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 SPASTQ9UBP0 616 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 IPO11Q9UI26 975 aaKnown RBP7□□□□□ -1.29
ATXN3-236ENST00000556220 FBXO2Q9UK22 296 aaPredicted RBP7□□□□□ -1.29
ATXN3-236ENST00000556220 ESPL1Q14674 2120 aa7□□□□□ -1.29
ATXN3-236ENST00000556220 DNHD1Q96M86 4753 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 ZFC3H1O60293 1989 aaKnown RBP6.99□□□□□ -1.29
ATXN3-236ENST00000556220 COL27A1Q8IZC6 1860 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-236ENST00000556220 A0A1W2PQM1 296 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 PRAMEF27A3QJZ7 478 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 VPS37CA5D8V6 355 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-236ENST00000556220 LRRC10BA6NIK2 292 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 D6RAR5 112 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 LMO7DNF2Z398 122 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 YY2O15391 372 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 PCDH8O95206 1070 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 PAK4O96013 591 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-236ENST00000556220 RPLP0P05388 317 aaKnown RBP6.99□□□□□ -1.29
ATXN3-236ENST00000556220 ANXA6P08133 673 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 ITIH1P19827 911 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 GJB2P29033 226 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 ETV5P41161 510 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 PIK3CAP42336 1068 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 PLK1P53350 603 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 ZFP36L1Q07352 338 aaKnown RBP6.99□□□□□ -1.29
ATXN3-236ENST00000556220 ADIGQ0VDE8 80 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 C1orf61Q13536 156 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 PDE1CQ14123 709 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-236ENST00000556220 FGL2Q14314 439 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 DLG2Q15700 870 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 KNOP1Q1ED39 458 aaKnown RBP6.99□□□□□ -1.29
ATXN3-236ENST00000556220 ACCSLQ4AC99 568 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 SFRP5Q5T4F7 317 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 CRYBG3Q68DQ2 2970 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 CNNM4Q6P4Q7 775 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 BRAPQ7Z569 592 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 SCML4Q8N228 414 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 SLC4A11Q8NBS3 891 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 C9orf43Q8TAL5 461 aaPredicted RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms