RNA–Protein interactions for RNA: ENST00000556076.5

CHGA-204, Transcript of chromogranin A, humanhuman

TSL 5

Gene CHGA, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-204ENST00000556076 CDKN3Q16667 212 aa16.29■□□□□ 0.2
CHGA-204ENST00000556076 PRRT3Q5FWE3 981 aa16.29■□□□□ 0.2
CHGA-204ENST00000556076 CFAP58Q5T655 872 aa16.29■□□□□ 0.2
CHGA-204ENST00000556076 CRTC1Q6UUV9 634 aa16.29■□□□□ 0.2
CHGA-204ENST00000556076 TMCO3Q6UWJ1 677 aa16.29■□□□□ 0.2
CHGA-204ENST00000556076 DCP2Q8IU60 420 aaKnown RBP16.29■□□□□ 0.2
CHGA-204ENST00000556076 PSTKQ8IV42 348 aaKnown RBP16.29■□□□□ 0.2
CHGA-204ENST00000556076 PHACTR4Q8IZ21 702 aa16.29■□□□□ 0.2
CHGA-204ENST00000556076 PELI3Q8N2H9 469 aa16.29■□□□□ 0.2
CHGA-204ENST00000556076 PDCD7Q8N8D1 485 aaKnown RBP16.29■□□□□ 0.2
CHGA-204ENST00000556076 HNRNPLLQ8WVV9 542 aaKnown RBP16.29■□□□□ 0.2
CHGA-204ENST00000556076 TSACCQ96A04 125 aaPredicted RBP16.29■□□□□ 0.2
CHGA-204ENST00000556076 IFT43Q96FT9 208 aa16.29■□□□□ 0.2
CHGA-204ENST00000556076 CRELD1Q96HD1 420 aa16.29■□□□□ 0.2
CHGA-204ENST00000556076 EIF3CQ99613 913 aaKnown RBP16.29■□□□□ 0.2
CHGA-204ENST00000556076 LRRC61Q9BV99 259 aa16.29■□□□□ 0.2
CHGA-204ENST00000556076 CLPBQ9H078 707 aa16.29■□□□□ 0.2
CHGA-204ENST00000556076 ATP13A3Q9H7F0 1226 aa16.29■□□□□ 0.2
CHGA-204ENST00000556076 NLGN3Q9NZ94 848 aa16.29■□□□□ 0.2
CHGA-204ENST00000556076 ATP8A1Q9Y2Q0 1164 aa16.29■□□□□ 0.2
CHGA-204ENST00000556076 PCDHB1Q9Y5F3 818 aa16.29■□□□□ 0.2
CHGA-204ENST00000556076 PCDHGC4Q9Y5F7 938 aa16.29■□□□□ 0.2
CHGA-204ENST00000556076 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.29■□□□□ 0.2
CHGA-204ENST00000556076 BZW2Q9Y6E2 419 aaKnown RBP16.29■□□□□ 0.2
CHGA-204ENST00000556076 TMEM110-MUSTN1A8MSY1 372 aa16.28■□□□□ 0.2
CHGA-204ENST00000556076 TRAFD1O14545 582 aaPredicted RBP16.28■□□□□ 0.2
CHGA-204ENST00000556076 MAFKO60675 156 aa16.28■□□□□ 0.2
CHGA-204ENST00000556076 CKMT1AP12532 417 aa16.28■□□□□ 0.2
CHGA-204ENST00000556076 GM2AP17900 193 aa16.28■□□□□ 0.2
CHGA-204ENST00000556076 SERPINA4P29622 427 aa16.28■□□□□ 0.2
CHGA-204ENST00000556076 HNF1BP35680 557 aa16.28■□□□□ 0.2
CHGA-204ENST00000556076 ADKP55263 362 aaKnown RBP16.28■□□□□ 0.2
CHGA-204ENST00000556076 CDH6P55285 790 aa16.28■□□□□ 0.2
CHGA-204ENST00000556076 TAS2R40P59535 323 aa16.28■□□□□ 0.2
CHGA-204ENST00000556076 ELP6Q0PNE2 266 aa16.28■□□□□ 0.2
CHGA-204ENST00000556076 PIGHQ14442 188 aaPredicted RBP16.28■□□□□ 0.2
CHGA-204ENST00000556076 INPP5AQ14642 412 aa16.28■□□□□ 0.2
CHGA-204ENST00000556076 LRRC14Q15048 493 aa16.28■□□□□ 0.2
CHGA-204ENST00000556076 BOLA3Q53S33 107 aa16.28■□□□□ 0.2
CHGA-204ENST00000556076 FAXCQ5TGI0 409 aa16.28■□□□□ 0.2
CHGA-204ENST00000556076 GUSBP11Q6P575 273 aa16.28■□□□□ 0.2
CHGA-204ENST00000556076 RD3Q7Z3Z2 195 aa16.28■□□□□ 0.2
CHGA-204ENST00000556076 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.28■□□□□ 0.2
CHGA-204ENST00000556076 PAF1Q8N7H5 531 aa16.28■□□□□ 0.2
CHGA-204ENST00000556076 NIPA2Q8N8Q9 360 aa16.28■□□□□ 0.2
CHGA-204ENST00000556076 RNF214Q8ND24 703 aa16.28■□□□□ 0.2
CHGA-204ENST00000556076 ZNF641Q96N77 438 aaPredicted RBP16.28■□□□□ 0.2
CHGA-204ENST00000556076 SMIM14Q96QK8 99 aa16.28■□□□□ 0.2
CHGA-204ENST00000556076 TUBGCP5Q96RT8 1024 aa16.28■□□□□ 0.2
CHGA-204ENST00000556076 APOBEC3BQ9UH17 382 aaKnown RBP16.28■□□□□ 0.2
CHGA-204ENST00000556076 IP6K2Q9UHH9 426 aa16.28■□□□□ 0.2
CHGA-204ENST00000556076 LHX6Q9UPM6 363 aa16.28■□□□□ 0.2
CHGA-204ENST00000556076 GPSM3Q9Y4H4 160 aa16.28■□□□□ 0.2
CHGA-204ENST00000556076 COL27A1Q8IZC6 1860 aaPredicted RBP16.28■□□□□ 0.2
CHGA-204ENST00000556076 CPED1A4D0V7 1026 aa16.27■□□□□ 0.2
CHGA-204ENST00000556076 MFSD11O43934 449 aa16.27■□□□□ 0.2
CHGA-204ENST00000556076 LZTS3O60299 673 aaPredicted RBP16.27■□□□□ 0.2
CHGA-204ENST00000556076 OPA1O60313 960 aa16.27■□□□□ 0.2
CHGA-204ENST00000556076 CSNK1DP48730 415 aa16.27■□□□□ 0.2
CHGA-204ENST00000556076 BCL2L1Q07817 233 aa16.27■□□□□ 0.2
CHGA-204ENST00000556076 KRT81Q14533 505 aa16.27■□□□□ 0.2
CHGA-204ENST00000556076 ZNF235Q14590 738 aa16.27■□□□□ 0.2
CHGA-204ENST00000556076 ACAP1Q15027 740 aa16.27■□□□□ 0.2
CHGA-204ENST00000556076 ALG11Q2TAA5 492 aa16.27■□□□□ 0.2
CHGA-204ENST00000556076 COL28A1Q2UY09 1125 aa16.27■□□□□ 0.2
CHGA-204ENST00000556076 HS1BP3Q53T59 392 aa16.27■□□□□ 0.2
CHGA-204ENST00000556076 TMCO4Q5TGY1 634 aa16.27■□□□□ 0.2
CHGA-204ENST00000556076 ERAP2Q6P179 960 aa16.27■□□□□ 0.2
CHGA-204ENST00000556076 BRAT1Q6PJG6 821 aa16.27■□□□□ 0.2
CHGA-204ENST00000556076 LIPIQ6XZB0 460 aa16.27■□□□□ 0.2
CHGA-204ENST00000556076 HID1Q8IV36 788 aa16.27■□□□□ 0.2
CHGA-204ENST00000556076 FAM174AQ8TBP5 190 aa16.27■□□□□ 0.2
CHGA-204ENST00000556076 ZNF564Q8TBZ8 553 aaPredicted RBP16.27■□□□□ 0.2
CHGA-204ENST00000556076 PDCD6IPQ8WUM4 868 aaKnown RBP16.27■□□□□ 0.2
CHGA-204ENST00000556076 TEKT4Q8WW24 435 aa16.27■□□□□ 0.2
CHGA-204ENST00000556076 ECHDC3Q96DC8 303 aa16.27■□□□□ 0.2
CHGA-204ENST00000556076 PSKH2Q96QS6 385 aa16.27■□□□□ 0.2
CHGA-204ENST00000556076 NOD2Q9HC29 1040 aa16.27■□□□□ 0.2
CHGA-204ENST00000556076 DONSONQ9NYP3 566 aa16.27■□□□□ 0.2
CHGA-204ENST00000556076 CTTNBP2NLQ9P2B4 639 aa16.27■□□□□ 0.2
CHGA-204ENST00000556076 SEPT3Q9UH03 358 aa16.27■□□□□ 0.2
CHGA-204ENST00000556076 H3BM21 787 aa16.26■□□□□ 0.19
CHGA-204ENST00000556076 RECQL5O94762 991 aaPredicted RBP16.26■□□□□ 0.19
CHGA-204ENST00000556076 ALPPL2P10696 532 aa16.26■□□□□ 0.19
CHGA-204ENST00000556076 HOXB3P14651 431 aaPredicted RBP16.26■□□□□ 0.19
CHGA-204ENST00000556076 TSHRP16473 764 aa16.26■□□□□ 0.19
CHGA-204ENST00000556076 ARSEP51690 589 aa16.26■□□□□ 0.19
CHGA-204ENST00000556076 TRAF2Q12933 501 aa16.26■□□□□ 0.19
CHGA-204ENST00000556076 IHHQ14623 411 aa16.26■□□□□ 0.19
CHGA-204ENST00000556076 PERM1Q5SV97 790 aa16.26■□□□□ 0.19
CHGA-204ENST00000556076 MACC1Q6ZN28 852 aa16.26■□□□□ 0.19
CHGA-204ENST00000556076 ZSCAN30Q86W11 494 aa16.26■□□□□ 0.19
CHGA-204ENST00000556076 SLC35F3Q8IY50 421 aa16.26■□□□□ 0.19
CHGA-204ENST00000556076 ATPAF2Q8N5M1 289 aa16.26■□□□□ 0.19
CHGA-204ENST00000556076 LZTR1Q8N653 840 aa16.26■□□□□ 0.19
CHGA-204ENST00000556076 IFI44Q8TCB0 444 aa16.26■□□□□ 0.19
CHGA-204ENST00000556076 HCAR2Q8TDS4 363 aa16.26■□□□□ 0.19
CHGA-204ENST00000556076 DCBLD2Q96PD2 775 aa16.26■□□□□ 0.19
CHGA-204ENST00000556076 APOOQ9BUR5 198 aa16.26■□□□□ 0.19
CHGA-204ENST00000556076 B4GALT6Q9UBX8 382 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms