RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 GSRP00390 522 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 IL2RAP01589 272 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 CCDC172P0C7W6 258 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 ATP1A3P13637 1013 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 FERP16591 822 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 TNFAIP3P21580 790 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 XPAP23025 273 aaPredicted RBP6.78□□□□□ -1.32
PSEN1-216ENST00000556066 ACP1P24666 158 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 RABIFP47224 123 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 GSK3AP49840 483 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 ZNF143P52747 638 aaPredicted RBP6.78□□□□□ -1.32
PSEN1-216ENST00000556066 THOP1P52888 689 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 RHOAP61586 193 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 HNRNPKP61978 463 aaKnown RBP eCLIP6.78□□□□□ -1.32
PSEN1-216ENST00000556066 E2F1Q01094 437 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 RAD51Q06609 339 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 CLN3Q13286 438 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 PDE1CQ14123 709 aaPredicted RBP6.78□□□□□ -1.32
PSEN1-216ENST00000556066 FZD2Q14332 565 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 MYLK3Q32MK0 819 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 GDPD4Q6W3E5 623 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 KYAT3Q6YP21 454 aaKnown RBP6.78□□□□□ -1.32
PSEN1-216ENST00000556066 TTC7BQ86TV6 843 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 VPS36Q86VN1 386 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 DCP2Q8IU60 420 aaKnown RBP6.78□□□□□ -1.32
PSEN1-216ENST00000556066 SVOPQ8N4V2 548 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 PAF1Q8N7H5 531 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 RTL3Q8N8U3 475 aaKnown RBP6.78□□□□□ -1.32
PSEN1-216ENST00000556066 RAB7BQ96AH8 199 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 ARHGEF26Q96DR7 871 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 HMCESQ96FZ2 354 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 EXOC2Q96KP1 924 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 APOLD1Q96LR9 279 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 GDAP1L1Q96MZ0 367 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 ERGIC2Q96RQ1 377 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 NCAPGQ9BPX3 1015 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 CNPY3Q9BT09 278 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 WRAP53Q9BUR4 548 aaKnown RBP6.78□□□□□ -1.32
PSEN1-216ENST00000556066 OSBPL1AQ9BXW6 950 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 KLC2Q9H0B6 622 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 ABCG4Q9H172 646 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 RETREG1Q9H6L5 497 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 NOL6Q9H6R4 1146 aaKnown RBP6.78□□□□□ -1.32
PSEN1-216ENST00000556066 CATSPERBQ9H7T0 1116 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 RAB6BQ9NRW1 208 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 NEU3Q9UQ49 428 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 HS3ST3A1Q9Y663 406 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 MGAQ8IWI9 3026 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 PIEZO2Q9H5I5 2752 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 SPTY2D1-AS1A0A0U1RR47 76 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 CPED1A4D0V7 1026 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 K7ESM1 405 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 SCAMP1O15126 338 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 INSIG1O15503 277 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 DAPK3O43293 454 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 TM7SF2O76062 418 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 MT-CO3P00414 261 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 CSF2P04141 144 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 CKMT1AP12532 417 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 NME1P15531 152 aaKnown RBP6.77□□□□□ -1.33
PSEN1-216ENST00000556066 ITIH2P19823 946 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 PSMA2P25787 234 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 ITPKBP27987 946 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 ABCG1P45844 678 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 DUSP3P51452 185 aaPredicted RBP6.77□□□□□ -1.33
PSEN1-216ENST00000556066 GSCP56915 257 aaPredicted RBP6.77□□□□□ -1.33
PSEN1-216ENST00000556066 YBEYP58557 167 aaPredicted RBP6.77□□□□□ -1.33
PSEN1-216ENST00000556066 TPI1P60174 286 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 RELBQ01201 579 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 TYRO3Q06418 890 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 NCAPHQ15003 741 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 TCEA2Q15560 299 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 CDKN3Q16667 212 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 DEFB133Q30KQ1 61 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 PARP15Q460N3 678 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 ANO6Q4KMQ2 910 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 CFAP58Q5T655 872 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 ACAD10Q6JQN1 1059 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 LRRC69Q6ZNQ3 347 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 ZSCAN30Q86W11 494 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 PARGQ86W56 976 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 MCOLN2Q8IZK6 566 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 GPATCH11Q8N954 259 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 TSEN2Q8NCE0 465 aaKnown RBP6.77□□□□□ -1.33
PSEN1-216ENST00000556066 ZNF548Q8NEK5 533 aaPredicted RBP6.77□□□□□ -1.33
PSEN1-216ENST00000556066 LMX1AQ8TE12 382 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 CXorf40AQ8TE69 158 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 TRIM44Q96DX7 344 aaPredicted RBP6.77□□□□□ -1.33
PSEN1-216ENST00000556066 IFT43Q96FT9 208 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 CRELD1Q96HD1 420 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 CELF6Q96J87 481 aaKnown RBP6.77□□□□□ -1.33
PSEN1-216ENST00000556066 KLF6Q99612 283 aaPredicted RBP6.77□□□□□ -1.33
PSEN1-216ENST00000556066 DUSP23Q9BVJ7 150 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 C1QTNF7Q9BXJ2 289 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 TTYH3Q9C0H2 523 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 NRSN2Q9GZP1 204 aa6.77□□□□□ -1.33
PSEN1-216ENST00000556066 NAT10Q9H0A0 1025 aaKnown RBP6.77□□□□□ -1.33
PSEN1-216ENST00000556066 DHX35Q9H5Z1 703 aaKnown RBP6.77□□□□□ -1.33
PSEN1-216ENST00000556066 ZNF395Q9H8N7 513 aaPredicted RBP6.77□□□□□ -1.33
PSEN1-216ENST00000556066 GPATCH2LQ9NWQ4 482 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms