RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 NANOGNBQ7Z5D8 188 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 SPPL2CQ8IUH8 684 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 TXNDC5Q8NBS9 432 aaKnown RBP7.82□□□□□ -1.16
CHD8-209ENST00000555935 PAPD5Q8NDF8 572 aaKnown RBP7.82□□□□□ -1.16
CHD8-209ENST00000555935 FAM110BQ8TC76 370 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 OSCP1Q8WVF1 389 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 VMP1Q96GC9 406 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 FAM167AQ96KS9 214 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 BCL7BQ9BQE9 202 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 CEP41Q9BYV8 373 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 CDT1Q9H211 546 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 PRDM12Q9H4Q4 367 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 ASB7Q9H672 318 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 ANKMY1Q9P2S6 941 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 ZNF639Q9UID6 485 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 FZD10Q9ULW2 581 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 TNFSF13BQ9Y275 285 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 TRAF6Q9Y4K3 522 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 RIPK3Q9Y572 518 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 C16orf96A6NNT2 1141 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 LACTBL1A8MY62 500 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 MTSS1O43312 755 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 ALBP02768 609 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 CYP2B6P20813 491 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 SAT1P21673 171 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 POLR2IP36954 125 aaKnown RBP7.82□□□□□ -1.16
CHD8-209ENST00000555935 ARCN1P48444 511 aaKnown RBP7.82□□□□□ -1.16
CHD8-209ENST00000555935 ATXN1P54253 815 aaKnown RBP7.82□□□□□ -1.16
CHD8-209ENST00000555935 MLLT10P55197 1068 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 C1QTNF8P60827 252 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 SP2Q02086 613 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 CD300CQ08708 224 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 TRIM32Q13049 653 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 PRPSAP1Q14558 356 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 SKIV2LQ15477 1246 aaKnown RBP7.82□□□□□ -1.16
CHD8-209ENST00000555935 XAF1Q6GPH4 301 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 JADE1Q6IE81 842 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 PDZD4Q76G19 769 aaPredicted RBP7.82□□□□□ -1.16
CHD8-209ENST00000555935 ANKRD13BQ86YJ7 626 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 SLC41A1Q8IVJ1 513 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 CNTN4Q8IWV2 1026 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 BPIFB6Q8NFQ5 453 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 USP33Q8TEY7 942 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 RNF139Q8WU17 664 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 PTCD2Q8WV60 388 aaKnown RBP7.82□□□□□ -1.16
CHD8-209ENST00000555935 HPS1Q92902 700 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 NXNL1Q96CM4 212 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 NSMCE3Q96MG7 304 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 TRMOQ9BU70 441 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 MAGEB5Q9BZ81 275 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 OSBPL2Q9H1P3 480 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 TPK1Q9H3S4 243 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 FZD8Q9H461 694 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 RMND5AQ9H871 391 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 AKIP1Q9NQ31 210 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 FAM49BQ9NUQ9 324 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 SETD4Q9NVD3 440 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.82□□□□□ -1.16
CHD8-209ENST00000555935 KLHL3Q9UH77 587 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 MAGED2Q9UNF1 606 aaPredicted RBP7.82□□□□□ -1.16
CHD8-209ENST00000555935 VWA7Q9Y334 891 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 FAM47E-STBD1D6RA91 191 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 NRP1O14786 923 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 TPST1O60507 370 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 USP12O75317 370 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 JRKO75564 520 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 RSL1D1O76021 490 aaKnown RBP7.82□□□□□ -1.16
CHD8-209ENST00000555935 PGK1P00558 417 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 LDLRP01130 860 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 NTRK1P04629 796 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 F7P08709 466 aaPredicted RBP7.82□□□□□ -1.16
CHD8-209ENST00000555935 HNRNPLP14866 589 aaKnown RBP eCLIP7.82□□□□□ -1.16
CHD8-209ENST00000555935 PTPN3P26045 913 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 AVPR1AP37288 418 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 STAT5BP51692 787 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 TKTL1P51854 596 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 NEK2P51955 445 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 GJA9P57773 515 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 RBP5P82980 135 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 TNFAIP2Q03169 654 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 COQ5Q5HYK3 327 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 PITRM1Q5JRX3 1037 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 CERCAMQ5T4B2 595 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 PPP1R26Q5T8A7 1209 aaPredicted RBP7.82□□□□□ -1.16
CHD8-209ENST00000555935 EEF1DP3Q658K8 133 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 STYK1Q6J9G0 422 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 KRT27Q7Z3Y8 459 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 CUZD1Q86UP6 607 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 BTN2A3PQ96KV6 586 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 ZMAT2Q96NC0 199 aaKnown RBP7.82□□□□□ -1.16
CHD8-209ENST00000555935 PGLYRP2Q96PD5 576 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 PCYT2Q99447 389 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 SLC39A3Q9BRY0 314 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 KIFC1Q9BW19 673 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 TMEM39BQ9GZU3 492 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 LHPPQ9H008 270 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 KLHL25Q9H0H3 589 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 RPAP3Q9H6T3 665 aaPredicted RBP7.82□□□□□ -1.16
CHD8-209ENST00000555935 PARVBQ9HBI1 364 aa7.82□□□□□ -1.16
CHD8-209ENST00000555935 CHRAC1Q9NRG0 131 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms