RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 STX2P32856 288 aa11.27□□□□□ -0.61
SHMT2-220ENST00000555634 ZXDAP98168 799 aa11.27□□□□□ -0.61
SHMT2-220ENST00000555634 TRAF2Q12933 501 aa11.27□□□□□ -0.61
SHMT2-220ENST00000555634 CST6Q15828 149 aa11.27□□□□□ -0.61
SHMT2-220ENST00000555634 ARSIQ5FYB1 569 aa11.27□□□□□ -0.61
SHMT2-220ENST00000555634 C9orf64Q5T6V5 341 aa11.27□□□□□ -0.61
SHMT2-220ENST00000555634 CCNI2Q6ZMN8 369 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-220ENST00000555634 TRMT10CQ7L0Y3 403 aaKnown RBP11.27□□□□□ -0.61
SHMT2-220ENST00000555634 KBTBD6Q86V97 674 aa11.27□□□□□ -0.61
SHMT2-220ENST00000555634 MMAAQ8IVH4 418 aaKnown RBP11.27□□□□□ -0.61
SHMT2-220ENST00000555634 SFTPA1Q8IWL2 248 aa11.27□□□□□ -0.61
SHMT2-220ENST00000555634 PALM2Q8IXS6 379 aa11.27□□□□□ -0.61
SHMT2-220ENST00000555634 KLHDC8BQ8IXV7 354 aa11.27□□□□□ -0.61
SHMT2-220ENST00000555634 PGBD3Q8N328 593 aa11.27□□□□□ -0.61
SHMT2-220ENST00000555634 CHST14Q8NCH0 376 aa11.27□□□□□ -0.61
SHMT2-220ENST00000555634 FLCNQ8NFG4 579 aa11.27□□□□□ -0.61
SHMT2-220ENST00000555634 BLOC1S5Q8TDH9 187 aa11.27□□□□□ -0.61
SHMT2-220ENST00000555634 RAB7BQ96AH8 199 aa11.27□□□□□ -0.61
SHMT2-220ENST00000555634 TADA1Q96BN2 335 aa11.27□□□□□ -0.61
SHMT2-220ENST00000555634 RSPH9Q9H1X1 276 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-220ENST00000555634 ACBD3Q9H3P7 528 aa11.27□□□□□ -0.61
SHMT2-220ENST00000555634 ARNT2Q9HBZ2 717 aa11.27□□□□□ -0.61
SHMT2-220ENST00000555634 PRSS16Q9NQE7 514 aa11.27□□□□□ -0.61
SHMT2-220ENST00000555634 ZDHHC18Q9NUE0 388 aa11.27□□□□□ -0.61
SHMT2-220ENST00000555634 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.27□□□□□ -0.615e-12■■□□□ 11.4
SHMT2-220ENST00000555634 ZC3H7BQ9UGR2 993 aaKnown RBP11.27□□□□□ -0.61
SHMT2-220ENST00000555634 WASF2Q9Y6W5 498 aa11.27□□□□□ -0.61
SHMT2-220ENST00000555634 PLXNA2O75051 1894 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 F5P12259 2224 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 C1orf232A0A0U1RR37 186 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 LOC285095A0A1B0GVY8 99 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 TTC24A2A3L6 582 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-220ENST00000555634 KRBA1A5PL33 1030 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 CHURC1-FNTBB4DL54 471 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 ANKRD66B4E2M5 251 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 ZNF821O75541 412 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-220ENST00000555634 GJB3O75712 270 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 IVLP07476 585 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 GSTA2P09210 222 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 TSHRP16473 764 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 ZNF30P17039 623 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 MGAT1P26572 445 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 TARSP26639 723 aaKnown RBP11.26□□□□□ -0.61
SHMT2-220ENST00000555634 ADRA1AP35348 466 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 RPS9P46781 194 aaKnown RBP11.26□□□□□ -0.61
SHMT2-220ENST00000555634 PMS2P54278 862 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 DHX9Q08211 1270 aaKnown RBP11.26□□□□□ -0.61
SHMT2-220ENST00000555634 POU6F1Q14863 301 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 PCID2Q5JVF3 399 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 EMC10Q5UCC4 262 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 ZDHHC20Q5W0Z9 365 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 DENND2CQ68D51 928 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 ZDHHC24Q6UX98 284 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 KIAA1324Q6UXG2 1013 aaKnown RBP11.26□□□□□ -0.61
SHMT2-220ENST00000555634 RANBP10Q6VN20 620 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 SYT13Q7L8C5 426 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 CACUL1Q86Y37 369 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 GSPT2Q8IYD1 628 aaKnown RBP11.26□□□□□ -0.61
SHMT2-220ENST00000555634 CNPY4Q8N129 248 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 TSTD1Q8NFU3 115 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 UBLCP1Q8WVY7 318 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-220ENST00000555634 CDKL2Q92772 493 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 CAVIN3Q969G5 261 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 PBXIP1Q96AQ6 731 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 ECHDC3Q96DC8 303 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 CFAP36Q96G28 342 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 ACOX2Q99424 681 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 GORASP1Q9BQQ3 440 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 CCDC77Q9BR77 488 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 GPR63Q9BZJ6 419 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 EPC1Q9H2F5 836 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 VPS37BQ9H9H4 285 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 LMAN1LQ9HAT1 526 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 MRM3Q9HC36 420 aaKnown RBP11.26□□□□□ -0.61
SHMT2-220ENST00000555634 MAGEE1Q9HCI5 957 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 FBRSL1Q9HCM7 1045 aaKnown RBP11.26□□□□□ -0.61
SHMT2-220ENST00000555634 ZDHHC4Q9NPG8 344 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 RAD18Q9NS91 495 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 CHMP2BQ9UQN3 213 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 SIT1Q9Y3P8 196 aa11.26□□□□□ -0.61
SHMT2-220ENST00000555634 PLXND1Q9Y4D7 1925 aa11.25□□□□□ -0.61
SHMT2-220ENST00000555634 LRRK1Q38SD2 2015 aa11.25□□□□□ -0.61
SHMT2-220ENST00000555634 A0A0J9YYE9 177 aa11.25□□□□□ -0.61
SHMT2-220ENST00000555634 TCRBV7S3A2A0A539 114 aa11.25□□□□□ -0.61
SHMT2-220ENST00000555634 TSPAN11A1L157 253 aa11.25□□□□□ -0.61
SHMT2-220ENST00000555634 C16orf96A6NNT2 1141 aa11.25□□□□□ -0.61
SHMT2-220ENST00000555634 BHMG1C9JSJ3 638 aaPredicted RBP11.25□□□□□ -0.61
SHMT2-220ENST00000555634 DYNC1I1O14576 645 aa11.25□□□□□ -0.61
SHMT2-220ENST00000555634 PFDN6O15212 129 aa11.25□□□□□ -0.61
SHMT2-220ENST00000555634 SLC7A4O43246 635 aa11.25□□□□□ -0.61
SHMT2-220ENST00000555634 TRBC1P01850 177 aa11.25□□□□□ -0.61
SHMT2-220ENST00000555634 ELFN1P0C7U0 828 aa11.25□□□□□ -0.61
SHMT2-220ENST00000555634 CHRNB1P11230 501 aa11.25□□□□□ -0.61
SHMT2-220ENST00000555634 ADRA1DP25100 572 aa11.25□□□□□ -0.61
SHMT2-220ENST00000555634 GKP32189 559 aa11.25□□□□□ -0.61
SHMT2-220ENST00000555634 HADHAP40939 763 aa11.25□□□□□ -0.61
SHMT2-220ENST00000555634 MAGEA4P43358 317 aa11.25□□□□□ -0.61
SHMT2-220ENST00000555634 CHRNA4P43681 627 aa11.25□□□□□ -0.61
SHMT2-220ENST00000555634 FAM193AP78312 1265 aa11.25□□□□□ -0.61
SHMT2-220ENST00000555634 PRAMEP78395 509 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms