RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 TCF15Q12870 199 aa12.76□□□□□ -0.37
SYNE2-219ENST00000555323 TMEM52BQ4KMG9 183 aa12.76□□□□□ -0.37
SYNE2-219ENST00000555323 SPDYCQ5MJ68 293 aa12.76□□□□□ -0.37
SYNE2-219ENST00000555323 CFAP58Q5T655 872 aa12.76□□□□□ -0.37
SYNE2-219ENST00000555323 SLC36A4Q6YBV0 504 aa12.76□□□□□ -0.37
SYNE2-219ENST00000555323 CACUL1Q86Y37 369 aa12.76□□□□□ -0.37
SYNE2-219ENST00000555323 KLHL7Q8IXQ5 586 aa12.76□□□□□ -0.37
SYNE2-219ENST00000555323 CBARPQ8N350 705 aaPredicted RBP12.76□□□□□ -0.37
SYNE2-219ENST00000555323 FRMD1Q8N878 549 aa12.76□□□□□ -0.37
SYNE2-219ENST00000555323 MNS1Q8NEH6 495 aa12.76□□□□□ -0.37
SYNE2-219ENST00000555323 CADM4Q8NFZ8 388 aa12.76□□□□□ -0.37
SYNE2-219ENST00000555323 GANCQ8TET4 914 aa12.76□□□□□ -0.37
SYNE2-219ENST00000555323 TOE1Q96GM8 510 aaKnown RBP12.76□□□□□ -0.37
SYNE2-219ENST00000555323 ZC3H10Q96K80 434 aaKnown RBP12.76□□□□□ -0.37
SYNE2-219ENST00000555323 SPACA7Q96KW9 195 aa12.76□□□□□ -0.37
SYNE2-219ENST00000555323 KRT12Q99456 494 aa12.76□□□□□ -0.37
SYNE2-219ENST00000555323 IRF2BPLQ9H1B7 796 aa12.76□□□□□ -0.37
SYNE2-219ENST00000555323 PREBQ9HCU5 417 aa12.76□□□□□ -0.37
SYNE2-219ENST00000555323 RAB6BQ9NRW1 208 aa12.76□□□□□ -0.37
SYNE2-219ENST00000555323 TPX2Q9ULW0 747 aaKnown RBP12.76□□□□□ -0.37
SYNE2-219ENST00000555323 CYP8B1Q9UNU6 501 aa12.76□□□□□ -0.37
SYNE2-219ENST00000555323 RPP40O75818 363 aaKnown RBP12.75□□□□□ -0.37
SYNE2-219ENST00000555323 CPP00450 1065 aa12.75□□□□□ -0.37
SYNE2-219ENST00000555323 ATXN1LP0C7T5 689 aaKnown RBP12.75□□□□□ -0.37
SYNE2-219ENST00000555323 HLA-DPA1P20036 260 aa12.75□□□□□ -0.37
SYNE2-219ENST00000555323 IVDP26440 423 aa12.75□□□□□ -0.37
SYNE2-219ENST00000555323 CDK16Q00536 496 aa12.75□□□□□ -0.37
SYNE2-219ENST00000555323 DR1Q01658 176 aa12.75□□□□□ -0.37
SYNE2-219ENST00000555323 ELP6Q0PNE2 266 aa12.75□□□□□ -0.37
SYNE2-219ENST00000555323 MSLNQ13421 630 aaPredicted RBP12.75□□□□□ -0.37
SYNE2-219ENST00000555323 PTK6Q13882 451 aa12.75□□□□□ -0.37
SYNE2-219ENST00000555323 SLC1A5Q15758 541 aa12.75□□□□□ -0.37
SYNE2-219ENST00000555323 CDKN3Q16667 212 aa12.75□□□□□ -0.37
SYNE2-219ENST00000555323 QPCTQ16769 361 aa12.75□□□□□ -0.37
SYNE2-219ENST00000555323 CCDC70Q6NSX1 233 aa12.75□□□□□ -0.37
SYNE2-219ENST00000555323 MAATS1Q7Z4T9 603 aa12.75□□□□□ -0.37
SYNE2-219ENST00000555323 RAVER1Q8IY67 606 aaKnown RBP12.75□□□□□ -0.37
SYNE2-219ENST00000555323 FAM160A2Q8N612 972 aaPredicted RBP12.75□□□□□ -0.37
SYNE2-219ENST00000555323 PDCD7Q8N8D1 485 aaKnown RBP12.75□□□□□ -0.37
SYNE2-219ENST00000555323 CEP112Q8N8E3 955 aa12.75□□□□□ -0.37
SYNE2-219ENST00000555323 IPMKQ8NFU5 416 aa12.75□□□□□ -0.37
SYNE2-219ENST00000555323 OR2T34Q8NGX1 318 aa12.75□□□□□ -0.37
SYNE2-219ENST00000555323 OR14C36Q8NHC7 312 aa12.75□□□□□ -0.37
SYNE2-219ENST00000555323 PDCD6IPQ8WUM4 868 aaKnown RBP12.75□□□□□ -0.37
SYNE2-219ENST00000555323 IFT43Q96FT9 208 aa12.75□□□□□ -0.37
SYNE2-219ENST00000555323 SRPK1Q96SB4 655 aaKnown RBP12.75□□□□□ -0.37
SYNE2-219ENST00000555323 DUSP15Q9H1R2 295 aaPredicted RBP12.75□□□□□ -0.37
SYNE2-219ENST00000555323 LRRC40Q9H9A6 602 aa12.75□□□□□ -0.37
SYNE2-219ENST00000555323 MAGEE1Q9HCI5 957 aa12.75□□□□□ -0.37
SYNE2-219ENST00000555323 PCDH12Q9NPG4 1184 aa12.75□□□□□ -0.37
SYNE2-219ENST00000555323 EIF2B3Q9NR50 452 aaKnown RBP12.75□□□□□ -0.37
SYNE2-219ENST00000555323 CTAGE15A4D2H0 777 aa12.74□□□□□ -0.37
SYNE2-219ENST00000555323 FAM187AA6NFU0 413 aa12.74□□□□□ -0.37
SYNE2-219ENST00000555323 LRRC72A6NJI9 287 aa12.74□□□□□ -0.37
SYNE2-219ENST00000555323 METTL12A8MUP2 240 aa12.74□□□□□ -0.37
SYNE2-219ENST00000555323 H0Y858 1186 aa12.74□□□□□ -0.37
SYNE2-219ENST00000555323 LATO43561 262 aa12.74□□□□□ -0.37
SYNE2-219ENST00000555323 SEMA4FO95754 770 aa12.74□□□□□ -0.37
SYNE2-219ENST00000555323 AGTP01019 485 aa12.74□□□□□ -0.37
SYNE2-219ENST00000555323 CTAGE8P0CG41 777 aa12.74□□□□□ -0.37
SYNE2-219ENST00000555323 ITIH2P19823 946 aa12.74□□□□□ -0.37
SYNE2-219ENST00000555323 XPAP23025 273 aaPredicted RBP12.74□□□□□ -0.37
SYNE2-219ENST00000555323 HNF1BP35680 557 aa12.74□□□□□ -0.37
SYNE2-219ENST00000555323 CCR5P51681 352 aa12.74□□□□□ -0.37
SYNE2-219ENST00000555323 CREB5Q02930 508 aa12.74□□□□□ -0.37
SYNE2-219ENST00000555323 C2orf54Q08AI8 447 aa12.74□□□□□ -0.37
SYNE2-219ENST00000555323 GPS1Q13098 491 aa12.74□□□□□ -0.37
SYNE2-219ENST00000555323 PPP1R7Q15435 360 aa12.74□□□□□ -0.37
SYNE2-219ENST00000555323 TRIP13Q15645 432 aaPredicted RBP12.74□□□□□ -0.37
SYNE2-219ENST00000555323 PCSK7Q16549 785 aa12.74□□□□□ -0.37
SYNE2-219ENST00000555323 FAXCQ5TGI0 409 aa12.74□□□□□ -0.37
SYNE2-219ENST00000555323 NAPEPLDQ6IQ20 393 aa12.74□□□□□ -0.37
SYNE2-219ENST00000555323 DENND5AQ6IQ26 1287 aa12.74□□□□□ -0.37
SYNE2-219ENST00000555323 ERAP2Q6P179 960 aa12.74□□□□□ -0.37
SYNE2-219ENST00000555323 USP45Q70EL2 814 aa12.74□□□□□ -0.37
SYNE2-219ENST00000555323 DPPA4Q7L190 304 aa12.74□□□□□ -0.37
SYNE2-219ENST00000555323 LINC00523Q86TU6 105 aa12.74□□□□□ -0.37
SYNE2-219ENST00000555323 CTAGE6Q86UF2 777 aa12.74□□□□□ -0.37
SYNE2-219ENST00000555323 FAM124AQ86V42 546 aa12.74□□□□□ -0.37
SYNE2-219ENST00000555323 TRIM69Q86WT6 500 aa12.74□□□□□ -0.37
SYNE2-219ENST00000555323 JAMLQ86YT9 394 aa12.74□□□□□ -0.37
SYNE2-219ENST00000555323 CTAGE4Q8IX94 777 aa12.74□□□□□ -0.37
SYNE2-219ENST00000555323 MMGT1Q8N4V1 131 aa12.74□□□□□ -0.37
SYNE2-219ENST00000555323 PRSS33Q8NF86 280 aa12.74□□□□□ -0.37
SYNE2-219ENST00000555323 ASB12Q8WXK4 309 aa12.74□□□□□ -0.37
SYNE2-219ENST00000555323 LRRC45Q96CN5 670 aa12.74□□□□□ -0.37
SYNE2-219ENST00000555323 FSD1LQ9BXM9 530 aa12.74□□□□□ -0.37
SYNE2-219ENST00000555323 INVSQ9Y283 1065 aa12.74□□□□□ -0.37
SYNE2-219ENST00000555323 CUL9Q8IWT3 2517 aa12.74□□□□□ -0.37
SYNE2-219ENST00000555323 TBC1D3DA0A087WVF3 549 aa12.73□□□□□ -0.37
SYNE2-219ENST00000555323 TBC1D3IA0A087WXS9 549 aa12.73□□□□□ -0.37
SYNE2-219ENST00000555323 TBC1D3EA0A087X179 549 aa12.73□□□□□ -0.37
SYNE2-219ENST00000555323 TBC1D3KA0A087X1G2 549 aa12.73□□□□□ -0.37
SYNE2-219ENST00000555323 TBC1D3FA6NER0 549 aaPredicted RBP12.73□□□□□ -0.37
SYNE2-219ENST00000555323 TBC1D3LB9A6J9 549 aa12.73□□□□□ -0.37
SYNE2-219ENST00000555323 F5H423 210 aaPredicted RBP12.73□□□□□ -0.37
SYNE2-219ENST00000555323 PSMD11O00231 422 aa12.73□□□□□ -0.37
SYNE2-219ENST00000555323 TTI1O43156 1089 aa12.73□□□□□ -0.37
SYNE2-219ENST00000555323 FGF1P05230 155 aa12.73□□□□□ -0.37
SYNE2-219ENST00000555323 APRTP07741 180 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms