RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	C1QTNF7	Q9BXJ2	289 aa		5.65	□□□□□ -1.5
PSMC6-208	ENST00000554956	STK33	Q9BYT3	514 aa		5.65	□□□□□ -1.5
PSMC6-208	ENST00000554956	CDC23	Q9UJX2	597 aa		5.65	□□□□□ -1.5
PSMC6-208	ENST00000554956	SLC39A10	Q9ULF5	831 aa		5.65	□□□□□ -1.5
PSMC6-208	ENST00000554956	RAD50	Q92878	1312 aa		5.65	□□□□□ -1.51
PSMC6-208	ENST00000554956	SCN5A	Q14524	2016 aa		5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956		B4DLN1	442 aa		5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	KIF28P	B7ZC32	967 aa		5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956		E5RJQ4	531 aa		5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956		J3KTA2	159 aa		5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	RRH	O14718	337 aa		5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	PCDH17	O14917	1159 aa		5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	DHH	O43323	396 aa		5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	CYP21A2	P08686	494 aa		5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	LINC00271	P0C7V0	271 aa		5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	SMIM10L2A	P0DMW4	78 aa		5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	SMIM10L2B	P0DMW5	78 aa		5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	THPO	P40225	353 aa		5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	HAL	P42357	657 aa		5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	MRPL12	P52815	198 aa	Known RBP	5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	TROAP	Q12815	778 aa		5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	GAB1	Q13480	694 aa		5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	GRM4	Q14833	912 aa		5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	IMMT	Q16891	758 aa	Known RBP	5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	CCDC144NL	Q6NUI1	221 aa		5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	PGBD2	Q6P3X8	592 aa		5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	SERINC5	Q86VE9	423 aa		5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	KRT73	Q86Y46	540 aa		5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	MYRIP	Q8NFW9	859 aa		5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	PIBF1	Q8WXW3	757 aa		5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	ZBTB10	Q96DT7	871 aa		5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	RAD9A	Q99638	391 aa		5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	UBAC1	Q9BSL1	405 aa		5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	KRT23	Q9C075	422 aa		5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	SPRTN	Q9H040	489 aa	Predicted RBP	5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	RWDD1	Q9H446	243 aa	Predicted RBP	5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	EPS8L2	Q9H6S3	715 aa		5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	TM7SF3	Q9NS93	570 aa		5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	DIAPH3	Q9NSV4	1193 aa		5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	SETD4	Q9NVD3	440 aa		5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	SEMA5B	Q9P283	1151 aa		5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	IGSF9	Q9P2J2	1179 aa		5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	REV3L	O60673	3130 aa		5.64	□□□□□ -1.51
PSMC6-208	ENST00000554956	CCDC187	A0A096LP49	1063 aa		5.63	□□□□□ -1.51
PSMC6-208	ENST00000554956	GOLGA6L3	A6NEY3	463 aa		5.63	□□□□□ -1.51
PSMC6-208	ENST00000554956	RSPH10B2	B2RC85	870 aa		5.63	□□□□□ -1.51
PSMC6-208	ENST00000554956	MEIS2	O14770	477 aa		5.63	□□□□□ -1.51
PSMC6-208	ENST00000554956	ATP9A	O75110	1047 aa		5.63	□□□□□ -1.51
PSMC6-208	ENST00000554956	TOP3B	O95985	862 aa	Known RBP	5.63	□□□□□ -1.51
PSMC6-208	ENST00000554956	LGALS2	P05162	132 aa		5.63	□□□□□ -1.51
PSMC6-208	ENST00000554956	RSPH10B	P0C881	870 aa		5.63	□□□□□ -1.51
PSMC6-208	ENST00000554956	IL9	P15248	144 aa		5.63	□□□□□ -1.51
PSMC6-208	ENST00000554956	KCNA5	P22460	613 aa		5.63	□□□□□ -1.51
PSMC6-208	ENST00000554956	CHML	P26374	656 aa		5.63	□□□□□ -1.51
PSMC6-208	ENST00000554956	GSTM5	P46439	218 aa		5.63	□□□□□ -1.51
PSMC6-208	ENST00000554956	SEMA3B	Q13214	749 aa		5.63	□□□□□ -1.51
PSMC6-208	ENST00000554956	BLMH	Q13867	455 aa		5.63	□□□□□ -1.51
PSMC6-208	ENST00000554956	TTC22	Q5TAA0	569 aa		5.63	□□□□□ -1.51
PSMC6-208	ENST00000554956	ZNF425	Q6IV72	752 aa		5.63	□□□□□ -1.51
PSMC6-208	ENST00000554956	TFAP2D	Q7Z6R9	452 aa		5.63	□□□□□ -1.51
PSMC6-208	ENST00000554956	RASGRP3	Q8IV61	690 aa		5.63	□□□□□ -1.51
PSMC6-208	ENST00000554956	SMAP1	Q8IYB5	467 aa	Predicted RBP	5.63	□□□□□ -1.51
PSMC6-208	ENST00000554956	SYTL1	Q8IYJ3	562 aa		5.63	□□□□□ -1.51
PSMC6-208	ENST00000554956	MYOCD	Q8IZQ8	938 aa		5.63	□□□□□ -1.51
PSMC6-208	ENST00000554956	IGFBPL1	Q8WX77	278 aa		5.63	□□□□□ -1.51
PSMC6-208	ENST00000554956	SMG7	Q92540	1137 aa	Known RBP	5.63	□□□□□ -1.51
PSMC6-208	ENST00000554956	ATP6V0A1	Q93050	837 aa		5.63	□□□□□ -1.51
PSMC6-208	ENST00000554956	RPL36AL	Q969Q0	106 aa	Known RBP	5.63	□□□□□ -1.51
PSMC6-208	ENST00000554956	MUL1	Q969V5	352 aa		5.63	□□□□□ -1.51
PSMC6-208	ENST00000554956	INPP4A	Q96PE3	977 aa	Predicted RBP	5.63	□□□□□ -1.51
PSMC6-208	ENST00000554956	TGS1	Q96RS0	853 aa	Known RBP	5.63	□□□□□ -1.51
PSMC6-208	ENST00000554956	NAP1L4	Q99733	375 aa	Known RBP	5.63	□□□□□ -1.51
PSMC6-208	ENST00000554956	TM2D2	Q9BX73	214 aa		5.63	□□□□□ -1.51
PSMC6-208	ENST00000554956	NUAK2	Q9H093	628 aa		5.63	□□□□□ -1.51
PSMC6-208	ENST00000554956	UBE2Z	Q9H832	354 aa	Predicted RBP	5.63	□□□□□ -1.51
PSMC6-208	ENST00000554956	MLXIPL	Q9NP71	852 aa		5.63	□□□□□ -1.51
PSMC6-208	ENST00000554956	NECTIN3	Q9NQS3	549 aa		5.63	□□□□□ -1.51
PSMC6-208	ENST00000554956	COG5	Q9UP83	839 aa		5.63	□□□□□ -1.51
PSMC6-208	ENST00000554956	DTNA	Q9Y4J8	743 aa		5.63	□□□□□ -1.51
PSMC6-208	ENST00000554956	NCOR1	O75376	2440 aa		5.62	□□□□□ -1.51
PSMC6-208	ENST00000554956	C17orf102	A2RUQ5	167 aa		5.62	□□□□□ -1.51
PSMC6-208	ENST00000554956		E7EWF7	191 aa		5.62	□□□□□ -1.51
PSMC6-208	ENST00000554956		H3BQ06	376 aa	Predicted RBP	5.62	□□□□□ -1.51
PSMC6-208	ENST00000554956	IFIT3	O14879	490 aa	Known RBP	5.62	□□□□□ -1.51
PSMC6-208	ENST00000554956	PIP5K1B	O14986	540 aa		5.62	□□□□□ -1.51
PSMC6-208	ENST00000554956	FFAR2	O15552	330 aa		5.62	□□□□□ -1.51
PSMC6-208	ENST00000554956	PLEKHA8P1	O95397	391 aa		5.62	□□□□□ -1.51
PSMC6-208	ENST00000554956	CHRNA1	P02708	482 aa		5.62	□□□□□ -1.51
PSMC6-208	ENST00000554956	POLR2M	P0CAP2	368 aa		5.62	□□□□□ -1.51
PSMC6-208	ENST00000554956	TGFB3	P10600	412 aa		5.62	□□□□□ -1.51
PSMC6-208	ENST00000554956	HOXD9	P28356	352 aa	Predicted RBP	5.62	□□□□□ -1.51
PSMC6-208	ENST00000554956	CCND2	P30279	289 aa		5.62	□□□□□ -1.51
PSMC6-208	ENST00000554956	ICAM3	P32942	547 aa		5.62	□□□□□ -1.51
PSMC6-208	ENST00000554956	CCT5	P48643	541 aa		5.62	□□□□□ -1.51
PSMC6-208	ENST00000554956	VPS41	P49754	854 aa		5.62	□□□□□ -1.51
PSMC6-208	ENST00000554956	SP4	Q02446	784 aa		5.62	□□□□□ -1.51
PSMC6-208	ENST00000554956	STARD3	Q14849	445 aa		5.62	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms