RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 WDR59Q6PJI9 974 aa17.11■□□□□ 0.33
NEK9-204ENST00000554258 ERN2Q76MJ5 926 aaKnown RBP17.11■□□□□ 0.33
NEK9-204ENST00000554258 NOP9Q86U38 636 aaKnown RBP17.11■□□□□ 0.33
NEK9-204ENST00000554258 CNGA4Q8IV77 575 aa17.11■□□□□ 0.33
NEK9-204ENST00000554258 FSTL5Q8N475 847 aaPredicted RBP17.11■□□□□ 0.33
NEK9-204ENST00000554258 FEM1CQ96JP0 617 aa17.11■□□□□ 0.33
NEK9-204ENST00000554258 LRRC4Q9HBW1 653 aa17.11■□□□□ 0.33
NEK9-204ENST00000554258 TSPAN16Q9UKR8 245 aa17.11■□□□□ 0.33
NEK9-204ENST00000554258 PNMA8BQ9ULN7 279 aaPredicted RBP17.11■□□□□ 0.33
NEK9-204ENST00000554258 GPR34Q9UPC5 381 aa17.11■□□□□ 0.33
NEK9-204ENST00000554258 PCDHGA3Q9Y5H0 932 aa17.11■□□□□ 0.33
NEK9-204ENST00000554258 ARHGAP10A1A4S6 786 aa17.1■□□□□ 0.33
NEK9-204ENST00000554258 THAP12O43422 761 aa17.1■□□□□ 0.33
NEK9-204ENST00000554258 TPM1P09493 284 aa17.1■□□□□ 0.33
NEK9-204ENST00000554258 RPL34P49207 117 aaKnown RBP17.1■□□□□ 0.33
NEK9-204ENST00000554258 PFN3P60673 137 aa17.1■□□□□ 0.33
NEK9-204ENST00000554258 MC1RQ01726 317 aa17.1■□□□□ 0.33
NEK9-204ENST00000554258 CDR2Q01850 454 aa17.1■□□□□ 0.33
NEK9-204ENST00000554258 ADIGQ0VDE8 80 aa17.1■□□□□ 0.33
NEK9-204ENST00000554258 SGCGQ13326 291 aa17.1■□□□□ 0.33
NEK9-204ENST00000554258 ELOCQ15369 112 aa17.1■□□□□ 0.33
NEK9-204ENST00000554258 TCEA2Q15560 299 aa17.1■□□□□ 0.33
NEK9-204ENST00000554258 ASIC2Q16515 512 aa17.1■□□□□ 0.33
NEK9-204ENST00000554258 MAP9Q49MG5 647 aa17.1■□□□□ 0.33
NEK9-204ENST00000554258 MSANTD2Q6P1R3 559 aa17.1■□□□□ 0.33
NEK9-204ENST00000554258 C16orf46Q6P387 395 aa17.1■□□□□ 0.33
NEK9-204ENST00000554258 LVRNQ6Q4G3 990 aa17.1■□□□□ 0.33
NEK9-204ENST00000554258 SLC35F5Q8WV83 523 aa17.1■□□□□ 0.33
NEK9-204ENST00000554258 EFHD1Q9BUP0 239 aa17.1■□□□□ 0.33
NEK9-204ENST00000554258 MAP4K5Q9Y4K4 846 aa17.1■□□□□ 0.33
NEK9-204ENST00000554258 KCTD3Q9Y597 815 aa17.1■□□□□ 0.33
NEK9-204ENST00000554258 BZW2Q9Y6E2 419 aaKnown RBP17.1■□□□□ 0.33
NEK9-204ENST00000554258 ALPIP09923 528 aa17.09■□□□□ 0.33
NEK9-204ENST00000554258 FECHP22830 423 aa17.09■□□□□ 0.33
NEK9-204ENST00000554258 CHRNA3P32297 505 aa17.09■□□□□ 0.33
NEK9-204ENST00000554258 CDH5P33151 784 aaPredicted RBP17.09■□□□□ 0.33
NEK9-204ENST00000554258 GPD2P43304 727 aa17.09■□□□□ 0.33
NEK9-204ENST00000554258 VASPP50552 380 aaPredicted RBP17.09■□□□□ 0.33
NEK9-204ENST00000554258 CDK17Q00537 523 aa17.09■□□□□ 0.33
NEK9-204ENST00000554258 FMO1Q01740 532 aa17.09■□□□□ 0.33
NEK9-204ENST00000554258 PPARDQ03181 441 aa17.09■□□□□ 0.33
NEK9-204ENST00000554258 ATP1A1-AS1Q5TC04 95 aa17.09■□□□□ 0.33
NEK9-204ENST00000554258 SPRED1Q7Z699 444 aa17.09■□□□□ 0.33
NEK9-204ENST00000554258 LGI2Q8N0V4 545 aa17.09■□□□□ 0.33
NEK9-204ENST00000554258 WDTC1Q8N5D0 677 aa17.09■□□□□ 0.33
NEK9-204ENST00000554258 SLC20A1Q8WUM9 679 aa17.09■□□□□ 0.33
NEK9-204ENST00000554258 KLF6Q99612 283 aaPredicted RBP17.09■□□□□ 0.33
NEK9-204ENST00000554258 HDAC8Q9BY41 377 aa17.09■□□□□ 0.33
NEK9-204ENST00000554258 ABHD10Q9NUJ1 306 aa17.09■□□□□ 0.33
NEK9-204ENST00000554258 APPL1Q9UKG1 709 aa17.09■□□□□ 0.33
NEK9-204ENST00000554258 B3GALT1Q9Y5Z6 326 aa17.09■□□□□ 0.33
NEK9-204ENST00000554258 KCNMB2Q9Y691 235 aa17.09■□□□□ 0.33
NEK9-204ENST00000554258 TCP11X1B4DZS4 312 aa17.08■□□□□ 0.32
NEK9-204ENST00000554258 TULP2O00295 520 aa17.08■□□□□ 0.32
NEK9-204ENST00000554258 SERPING1P05155 500 aa17.08■□□□□ 0.32
NEK9-204ENST00000554258 SETSIPP0DME0 302 aa17.08■□□□□ 0.32
NEK9-204ENST00000554258 FGF3P11487 239 aaPredicted RBP17.08■□□□□ 0.32
NEK9-204ENST00000554258 TCN2P20062 427 aa17.08■□□□□ 0.32
NEK9-204ENST00000554258 BST2Q10589 180 aaKnown RBP17.08■□□□□ 0.32
NEK9-204ENST00000554258 GOLGA7BQ2TAP0 167 aa17.08■□□□□ 0.32
NEK9-204ENST00000554258 DENND1BQ6P3S1 775 aa17.08■□□□□ 0.32
NEK9-204ENST00000554258 ZNF571Q7Z3V5 609 aaPredicted RBP17.08■□□□□ 0.32
NEK9-204ENST00000554258 SIX6OS1Q8N1H7 587 aa17.08■□□□□ 0.32
NEK9-204ENST00000554258 CCDC112Q8NEF3 446 aa17.08■□□□□ 0.32
NEK9-204ENST00000554258 TMIEQ8NEW7 156 aa17.08■□□□□ 0.32
NEK9-204ENST00000554258 STK32AQ8WU08 396 aa17.08■□□□□ 0.32
NEK9-204ENST00000554258 PDLIM2Q96JY6 352 aa17.08■□□□□ 0.32
NEK9-204ENST00000554258 CCDC114Q96M63 670 aa17.08■□□□□ 0.32
NEK9-204ENST00000554258 LENG8Q96PV6 779 aaPredicted RBP17.08■□□□□ 0.32
NEK9-204ENST00000554258 PANX2Q96RD6 677 aa17.08■□□□□ 0.32
NEK9-204ENST00000554258 AGPAT1Q99943 283 aa17.08■□□□□ 0.32
NEK9-204ENST00000554258 SLC4A5Q9BY07 1137 aa17.08■□□□□ 0.32
NEK9-204ENST00000554258 UNKQ9C0B0 810 aaKnown RBP17.08■□□□□ 0.32
NEK9-204ENST00000554258 HAUS4Q9H6D7 363 aa17.08■□□□□ 0.32
NEK9-204ENST00000554258 HESX1Q9UBX0 185 aa17.08■□□□□ 0.32
NEK9-204ENST00000554258 HGSO14964 777 aaPredicted RBP17.07■□□□□ 0.32
NEK9-204ENST00000554258 XPO1O14980 1071 aaKnown RBP17.07■□□□□ 0.32
NEK9-204ENST00000554258 MOCS2O96007 188 aaPredicted RBP17.07■□□□□ 0.32
NEK9-204ENST00000554258 PRNPP04156 253 aa17.07■□□□□ 0.32
NEK9-204ENST00000554258 CYP1A1P04798 512 aaPredicted RBP17.07■□□□□ 0.32
NEK9-204ENST00000554258 MMEP08473 750 aa17.07■□□□□ 0.32
NEK9-204ENST00000554258 SKILP12757 684 aa17.07■□□□□ 0.32
NEK9-204ENST00000554258 CTSEP14091 401 aa17.07■□□□□ 0.32
NEK9-204ENST00000554258 PLK1P53350 603 aa17.07■□□□□ 0.32
NEK9-204ENST00000554258 KLHL30Q0D2K2 578 aa17.07■□□□□ 0.32
NEK9-204ENST00000554258 TRIM72Q6ZMU5 477 aa17.07■□□□□ 0.32
NEK9-204ENST00000554258 RCBTB1Q8NDN9 531 aa17.07■□□□□ 0.32
NEK9-204ENST00000554258 SLC30A5Q8TAD4 765 aa17.07■□□□□ 0.32
NEK9-204ENST00000554258 UBA3Q8TBC4 463 aa17.07■□□□□ 0.32
NEK9-204ENST00000554258 KCTD13Q8WZ19 329 aa17.07■□□□□ 0.32
NEK9-204ENST00000554258 STARD8Q92502 1023 aa17.07■□□□□ 0.32
NEK9-204ENST00000554258 ART4Q93070 314 aa17.07■□□□□ 0.32
NEK9-204ENST00000554258 FCRL2Q96LA5 508 aaPredicted RBP17.07■□□□□ 0.32
NEK9-204ENST00000554258 C5orf34Q96MH7 638 aa17.07■□□□□ 0.32
NEK9-204ENST00000554258 PCDHB18PQ96TA0 734 aa17.07■□□□□ 0.32
NEK9-204ENST00000554258 SLC29A3Q9BZD2 475 aa17.07■□□□□ 0.32
NEK9-204ENST00000554258 RDH14Q9HBH5 336 aa17.07■□□□□ 0.32
NEK9-204ENST00000554258 PHTF1Q9UMS5 762 aa17.07■□□□□ 0.32
NEK9-204ENST00000554258 ARHGEF17Q96PE2 2063 aaPredicted RBP17.06■□□□□ 0.32
NEK9-204ENST00000554258 DIAPH2O60879 1101 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms