RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 FBRSQ9HAH7 460 aa10.96□□□□□ -0.65
PABPN1-203ENST00000553960 DNAJC17Q9NVM6 304 aaKnown RBP10.96□□□□□ -0.65
PABPN1-203ENST00000553960 NLE1Q9NVX2 485 aaPredicted RBP10.96□□□□□ -0.65
PABPN1-203ENST00000553960 PHTF1Q9UMS5 762 aa10.96□□□□□ -0.65
PABPN1-203ENST00000553960 SMG5Q9UPR3 1016 aaKnown RBP10.96□□□□□ -0.65
PABPN1-203ENST00000553960 RAI2Q9Y5P3 530 aa10.96□□□□□ -0.65
PABPN1-203ENST00000553960 A0A0J9YYE9 177 aa10.95□□□□□ -0.66
PABPN1-203ENST00000553960 CCDC189A1A4V9 331 aa10.95□□□□□ -0.66
PABPN1-203ENST00000553960 RGSL1A5PLK6 1076 aa10.95□□□□□ -0.66
PABPN1-203ENST00000553960 AGAP14A8MT82 685 aa10.95□□□□□ -0.66
PABPN1-203ENST00000553960 SHOX2O60902 331 aaPredicted RBP10.95□□□□□ -0.66
PABPN1-203ENST00000553960 USP12O75317 370 aa10.95□□□□□ -0.66
PABPN1-203ENST00000553960 TRBC1P01850 177 aa10.95□□□□□ -0.66
PABPN1-203ENST00000553960 INHBAP08476 426 aa10.95□□□□□ -0.66
PABPN1-203ENST00000553960 OGNP20774 298 aaKnown RBP10.95□□□□□ -0.66
PABPN1-203ENST00000553960 SERPINA4P29622 427 aa10.95□□□□□ -0.66
PABPN1-203ENST00000553960 GJA4P35212 333 aa10.95□□□□□ -0.66
PABPN1-203ENST00000553960 CCNFP41002 786 aa10.95□□□□□ -0.66
PABPN1-203ENST00000553960 ZNF140P52738 457 aaPredicted RBP10.95□□□□□ -0.66
PABPN1-203ENST00000553960 MAXP61244 160 aa10.95□□□□□ -0.66
PABPN1-203ENST00000553960 BCL2L1Q07817 233 aa10.95□□□□□ -0.66
PABPN1-203ENST00000553960 TRAF2Q12933 501 aa10.95□□□□□ -0.66
PABPN1-203ENST00000553960 SPARCL1Q14515 664 aa10.95□□□□□ -0.66
PABPN1-203ENST00000553960 DLG2Q15700 870 aa10.95□□□□□ -0.66
PABPN1-203ENST00000553960 DBN1Q16643 649 aa10.95□□□□□ -0.66
PABPN1-203ENST00000553960 CDKN3Q16667 212 aa10.95□□□□□ -0.66
PABPN1-203ENST00000553960 QPCTQ16769 361 aa10.95□□□□□ -0.66
PABPN1-203ENST00000553960 KCTD19Q17RG1 926 aaPredicted RBP10.95□□□□□ -0.66
PABPN1-203ENST00000553960 INSCQ1MX18 579 aa10.95□□□□□ -0.66
PABPN1-203ENST00000553960 HNRNPA1L2Q32P51 320 aaKnown RBP10.95□□□□□ -0.66
PABPN1-203ENST00000553960 HSF5Q4G112 596 aaPredicted RBP10.95□□□□□ -0.66
PABPN1-203ENST00000553960 ARMC12Q5T9G4 340 aa10.95□□□□□ -0.66
PABPN1-203ENST00000553960 TRMT10BQ6PF06 316 aaKnown RBP10.95□□□□□ -0.66
PABPN1-203ENST00000553960 EXOC3L1Q86VI1 746 aa10.95□□□□□ -0.66
PABPN1-203ENST00000553960 NDUFAF2Q8N183 169 aa10.95□□□□□ -0.66
PABPN1-203ENST00000553960 TTC30BQ8N4P2 665 aa10.95□□□□□ -0.66
PABPN1-203ENST00000553960 OR13J1Q8NGT2 312 aa10.95□□□□□ -0.66
PABPN1-203ENST00000553960 OR2A12Q8NGT7 310 aa10.95□□□□□ -0.66
PABPN1-203ENST00000553960 EPS8L3Q8TE67 593 aaKnown RBP10.95□□□□□ -0.66
PABPN1-203ENST00000553960 CHFRQ96EP1 664 aa10.95□□□□□ -0.66
PABPN1-203ENST00000553960 SCRN2Q96FV2 425 aa10.95□□□□□ -0.66
PABPN1-203ENST00000553960 C8orf33Q9H7E9 229 aaPredicted RBP10.95□□□□□ -0.66
PABPN1-203ENST00000553960 CHRAC1Q9NRG0 131 aa10.95□□□□□ -0.66
PABPN1-203ENST00000553960 SMYD2Q9NRG4 433 aa10.95□□□□□ -0.66
PABPN1-203ENST00000553960 CLDND1Q9NY35 253 aa10.95□□□□□ -0.66
PABPN1-203ENST00000553960 PLK2Q9NYY3 685 aa10.95□□□□□ -0.66
PABPN1-203ENST00000553960 UBP1Q9NZI7 540 aa10.95□□□□□ -0.66
PABPN1-203ENST00000553960 THAP10Q9P2Z0 257 aaPredicted RBP10.95□□□□□ -0.66
PABPN1-203ENST00000553960 COLQQ9Y215 455 aaPredicted RBP10.95□□□□□ -0.66
PABPN1-203ENST00000553960 USP15Q9Y4E8 981 aaPredicted RBP10.95□□□□□ -0.66
PABPN1-203ENST00000553960 CKAP5Q14008 2032 aa10.95□□□□□ -0.66
PABPN1-203ENST00000553960 HMX2A2RU54 273 aa10.94□□□□□ -0.66
PABPN1-203ENST00000553960 OTOL1A6NHN0 477 aaPredicted RBP10.94□□□□□ -0.66
PABPN1-203ENST00000553960 C2orf81A6NN90 581 aa10.94□□□□□ -0.66
PABPN1-203ENST00000553960 TYROBPO43914 113 aa10.94□□□□□ -0.66
PABPN1-203ENST00000553960 ZNF30P17039 623 aa10.94□□□□□ -0.66
PABPN1-203ENST00000553960 NR1D1P20393 614 aa10.94□□□□□ -0.66
PABPN1-203ENST00000553960 LPOP22079 712 aaPredicted RBP10.94□□□□□ -0.66
PABPN1-203ENST00000553960 SPRP35270 261 aaPredicted RBP10.94□□□□□ -0.66
PABPN1-203ENST00000553960 SLC26A3P40879 764 aa10.94□□□□□ -0.66
PABPN1-203ENST00000553960 LEPRP48357 1165 aaKnown RBP10.94□□□□□ -0.66
PABPN1-203ENST00000553960 LIMK2P53671 638 aa10.94□□□□□ -0.66
PABPN1-203ENST00000553960 PPP2R2AP63151 447 aa10.94□□□□□ -0.66
PABPN1-203ENST00000553960 CREB5Q02930 508 aa10.94□□□□□ -0.66
PABPN1-203ENST00000553960 ITKQ08881 620 aa10.94□□□□□ -0.66
PABPN1-203ENST00000553960 GEN1Q17RS7 908 aa10.94□□□□□ -0.66
PABPN1-203ENST00000553960 TYSND1Q2T9J0 566 aa10.94□□□□□ -0.66
PABPN1-203ENST00000553960 NLRP8Q86W28 1048 aa10.94□□□□□ -0.66
PABPN1-203ENST00000553960 RALGPS2Q86X27 583 aaPredicted RBP10.94□□□□□ -0.66
PABPN1-203ENST00000553960 TAB3Q8N5C8 712 aaPredicted RBP10.94□□□□□ -0.66
PABPN1-203ENST00000553960 C2CD4AQ8NCU7 369 aaPredicted RBP10.94□□□□□ -0.66
PABPN1-203ENST00000553960 GRIN3AQ8TCU5 1115 aa10.94□□□□□ -0.66
PABPN1-203ENST00000553960 UCMAQ8WVF2 138 aa10.94□□□□□ -0.66
PABPN1-203ENST00000553960 FGF14Q92915 247 aa10.94□□□□□ -0.66
PABPN1-203ENST00000553960 FAM131CQ96AQ9 280 aa10.94□□□□□ -0.66
PABPN1-203ENST00000553960 MFSD3Q96ES6 412 aa10.94□□□□□ -0.66
PABPN1-203ENST00000553960 CABS1Q96KC9 395 aa10.94□□□□□ -0.66
PABPN1-203ENST00000553960 HEPHQ9BQS7 1158 aa10.94□□□□□ -0.66
PABPN1-203ENST00000553960 RHOJQ9H4E5 214 aa10.94□□□□□ -0.66
PABPN1-203ENST00000553960 SUV39H2Q9H5I1 410 aa10.94□□□□□ -0.66
PABPN1-203ENST00000553960 ZFATQ9P243 1243 aa10.94□□□□□ -0.66
PABPN1-203ENST00000553960 SUN2Q9UH99 717 aa10.94□□□□□ -0.66
PABPN1-203ENST00000553960 ADAM21Q9UKJ8 722 aa10.94□□□□□ -0.66
PABPN1-203ENST00000553960 VPS9D1Q9Y2B5 631 aa10.94□□□□□ -0.66
PABPN1-203ENST00000553960 IKBKGQ9Y6K9 419 aa10.94□□□□□ -0.66
PABPN1-203ENST00000553960 MYLKQ15746 1914 aa10.94□□□□□ -0.66
PABPN1-203ENST00000553960 EDDM13A0A1B0GTR0 161 aa10.93□□□□□ -0.66
PABPN1-203ENST00000553960 CAPN8A6NHC0 703 aa10.93□□□□□ -0.66
PABPN1-203ENST00000553960 K7ERQ8 282 aa10.93□□□□□ -0.66
PABPN1-203ENST00000553960 TM9SF1O15321 606 aa10.93□□□□□ -0.66
PABPN1-203ENST00000553960 MBTPS2O43462 519 aa10.93□□□□□ -0.66
PABPN1-203ENST00000553960 RPP40O75818 363 aaKnown RBP10.93□□□□□ -0.66
PABPN1-203ENST00000553960 COL6A2P12110 1019 aa10.93□□□□□ -0.66
PABPN1-203ENST00000553960 ARSAP15289 507 aa10.93□□□□□ -0.66
PABPN1-203ENST00000553960 NMBRP28336 390 aa10.93□□□□□ -0.66
PABPN1-203ENST00000553960 CHRNA4P43681 627 aa10.93□□□□□ -0.66
PABPN1-203ENST00000553960 DCDC1P59894 354 aa10.93□□□□□ -0.66
PABPN1-203ENST00000553960 MAGOHP61326 146 aaKnown RBP10.93□□□□□ -0.66
PABPN1-203ENST00000553960 ELAVL3Q14576 367 aaKnown RBP10.93□□□□□ -0.66
PABPN1-203ENST00000553960 SMAD2Q15796 467 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms