RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 VWA5B1Q5TIE3 1220 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 SLC30A6Q6NXT4 461 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 R3HCC1LQ7Z5L2 792 aaKnown RBP2.43□□□□□ -2.02
SRP54-204ENST00000553923 IGFN1Q86VF2 1251 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 CCDC25Q86WR0 208 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 VSIG1Q86XK7 387 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 NRSN1Q8IZ57 195 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 TMEM57Q8N5G2 664 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 ZNF713Q8N859 430 aaPredicted RBP2.43□□□□□ -2.02
SRP54-204ENST00000553923 SCAMP5Q8TAC9 235 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 SPPL3Q8TCT6 385 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 OTUD7AQ8TE49 926 aaPredicted RBP2.43□□□□□ -2.02
SRP54-204ENST00000553923 HERVK_113Q902F9 699 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 STAMQ92783 540 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 VMP1Q96GC9 406 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 REXO5Q96IC2 774 aaKnown RBP2.43□□□□□ -2.02
SRP54-204ENST00000553923 CNDP2Q96KP4 475 aaKnown RBP2.43□□□□□ -2.02
SRP54-204ENST00000553923 SPATA17Q96L03 361 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 C7orf26Q96N11 449 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 MPHOSPH8Q99549 860 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 RTKNQ9BST9 563 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 MXD3Q9BW11 206 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 FTOQ9C0B1 505 aaKnown RBP eCLIP2.43□□□□□ -2.02
SRP54-204ENST00000553923 PDCL3Q9H2J4 239 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 GHITMQ9H3K2 345 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 ELAC1Q9H777 363 aaKnown RBP2.43□□□□□ -2.02
SRP54-204ENST00000553923 GRPEL1Q9HAV7 217 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 SCRT2Q9NQ03 307 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 ZHX1Q9UKY1 873 aaPredicted RBP2.43□□□□□ -2.02
SRP54-204ENST00000553923 RAB21Q9UL25 225 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 SLC12A4Q9UP95 1085 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 CAMK2AQ9UQM7 478 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 SNX5Q9Y5X3 404 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 SAA2-SAA4A0A096LPE2 208 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 hCG_1807616A0A1W2PRN6 198 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 TRIM64A6NGJ6 449 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 TRIM64BA6NI03 449 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 NPIPB11E5RHQ5 1161 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 H0Y3Z8 333 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 CLGNO14967 610 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 KLK10O43240 276 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 DNPH1O43598 174 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 DKC1O60832 514 aaKnown RBP eCLIP2.42□□□□□ -2.02
SRP54-204ENST00000553923 NTSR2O95665 410 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 HSPA4LO95757 839 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 ANXA6P08133 673 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 NPPBP16860 134 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 AMD1P17707 334 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 CHMP24386 653 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 KLRC2P26717 231 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 ABCD3P28288 659 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 CST5P28325 142 aaPredicted RBP2.42□□□□□ -2.02
SRP54-204ENST00000553923 ARL3P36405 182 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 ATP6V1E1P36543 226 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 CCR5P51681 352 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 RBM5P52756 815 aaKnown RBP eCLIP2.42□□□□□ -2.02
SRP54-204ENST00000553923 ALDH18A1P54886 795 aaKnown RBP2.42□□□□□ -2.02
SRP54-204ENST00000553923 TMPRSS3P57727 454 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 RPL15P61313 204 aaKnown RBP2.42□□□□□ -2.02
SRP54-204ENST00000553923 ERVK11-1P61568 191 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 ROR1Q01973 937 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 GALNT2Q10471 571 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 DLG1Q12959 904 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 CDC16Q13042 620 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 WTAPQ15007 396 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 RBBP5Q15291 538 aaKnown RBP2.42□□□□□ -2.02
SRP54-204ENST00000553923 GPR68Q15743 365 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 BTBD16Q32M84 506 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 ATG16L1Q676U5 607 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 HEPHL1Q6MZM0 1159 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 ATF7IPQ6VMQ6 1270 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 BRINP3Q76B58 766 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 SYT13Q7L8C5 426 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 DNAJB7Q7Z6W7 309 aaPredicted RBP2.42□□□□□ -2.02
SRP54-204ENST00000553923 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.42□□□□□ -2.02
SRP54-204ENST00000553923 TRABD2AQ86V40 505 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 IQCA1Q86XH1 822 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 KLBQ86Z14 1044 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 GALNT13Q8IUC8 556 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 HERC6Q8IVU3 1022 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 HSCBQ8IWL3 235 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 C17orf53Q8N3J3 647 aaPredicted RBP2.42□□□□□ -2.02
SRP54-204ENST00000553923 DPP10Q8N608 796 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 TSPYL6Q8N831 410 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 TEX45Q8NA69 505 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 IL17RCQ8NAC3 791 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 OR1N1Q8NGS0 311 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 CEP76Q8TAP6 659 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 FAM110DQ8TAY7 271 aaPredicted RBP2.42□□□□□ -2.02
SRP54-204ENST00000553923 SLC35F5Q8WV83 523 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 WDR60Q8WVS4 1066 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 THAP4Q8WY91 577 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 RSPH1Q8WYR4 309 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 RFFLQ8WZ73 363 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 RNF125Q96EQ8 232 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 BICD1Q96G01 975 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 SCMH1Q96GD3 660 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 CALML4Q96GE6 196 aa2.42□□□□□ -2.02
SRP54-204ENST00000553923 BAG1Q99933 345 aaPredicted RBP2.42□□□□□ -2.02
SRP54-204ENST00000553923 TREX2Q9BQ50 279 aaPredicted RBP2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms