RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 BTBD3Q9Y2F9 522 aa20.52■□□□□ 0.88
FOXA1-203ENST00000553751 PCDHGC4Q9Y5F7 938 aa20.52■□□□□ 0.88
FOXA1-203ENST00000553751 HEY1Q9Y5J3 304 aa20.52■□□□□ 0.88
FOXA1-203ENST00000553751 SPAARA0A1B0GVQ0 90 aa20.51■□□□□ 0.87
FOXA1-203ENST00000553751 TM7SF2O76062 418 aa20.51■□□□□ 0.87
FOXA1-203ENST00000553751 ZFXP17010 805 aaPredicted RBP20.51■□□□□ 0.87
FOXA1-203ENST00000553751 EPHA8P29322 1005 aaPredicted RBP20.51■□□□□ 0.87
FOXA1-203ENST00000553751 RXRGP48443 463 aa20.51■□□□□ 0.87
FOXA1-203ENST00000553751 ARRB1P49407 418 aaPredicted RBP20.51■□□□□ 0.87
FOXA1-203ENST00000553751 SEMG2Q02383 582 aa20.51■□□□□ 0.87
FOXA1-203ENST00000553751 RALGDSQ12967 914 aa20.51■□□□□ 0.87
FOXA1-203ENST00000553751 SUZ12Q15022 739 aaKnown RBP20.51■□□□□ 0.87
FOXA1-203ENST00000553751 NPNTQ6UXI9 565 aa20.51■□□□□ 0.87
FOXA1-203ENST00000553751 KDM7AQ6ZMT4 941 aa20.51■□□□□ 0.87
FOXA1-203ENST00000553751 SPOCD1Q6ZMY3 1216 aa20.51■□□□□ 0.87
FOXA1-203ENST00000553751 PTAR1Q7Z6K3 402 aaPredicted RBP20.51■□□□□ 0.87
FOXA1-203ENST00000553751 CCDC13Q8IYE1 715 aa20.51■□□□□ 0.87
FOXA1-203ENST00000553751 OXR1Q8N573 874 aa20.51■□□□□ 0.87
FOXA1-203ENST00000553751 CCNYQ8ND76 341 aa20.51■□□□□ 0.87
FOXA1-203ENST00000553751 SAP25Q8TEE9 199 aa20.51■□□□□ 0.87
FOXA1-203ENST00000553751 SETD7Q8WTS6 366 aaKnown RBP20.51■□□□□ 0.87
FOXA1-203ENST00000553751 KRT35Q92764 455 aa20.51■□□□□ 0.87
FOXA1-203ENST00000553751 CENPTQ96BT3 561 aa20.51■□□□□ 0.87
FOXA1-203ENST00000553751 CALR3Q96L12 384 aaKnown RBP20.51■□□□□ 0.87
FOXA1-203ENST00000553751 DESI2Q9BSY9 194 aa20.51■□□□□ 0.87
FOXA1-203ENST00000553751 POLR1EQ9GZS1 481 aaKnown RBP20.51■□□□□ 0.87
FOXA1-203ENST00000553751 AMACRQ9UHK6 382 aa20.51■□□□□ 0.87
FOXA1-203ENST00000553751 LRRK1Q38SD2 2015 aa20.51■□□□□ 0.87
FOXA1-203ENST00000553751 GOLGA6L6A8MZA4 724 aa20.5■□□□□ 0.87
FOXA1-203ENST00000553751 FPGTO14772 594 aa20.5■□□□□ 0.87
FOXA1-203ENST00000553751 YKT6O15498 198 aa20.5■□□□□ 0.87
FOXA1-203ENST00000553751 HLA-DQB2P05538 268 aa20.5■□□□□ 0.87
FOXA1-203ENST00000553751 C6P13671 934 aa20.5■□□□□ 0.87
FOXA1-203ENST00000553751 CCNB1P14635 433 aa20.5■□□□□ 0.87
FOXA1-203ENST00000553751 IGFALSP35858 605 aa20.5■□□□□ 0.87
FOXA1-203ENST00000553751 LIG3P49916 1009 aa20.5■□□□□ 0.87
FOXA1-203ENST00000553751 POLR2LP62875 67 aaKnown RBP20.5■□□□□ 0.87
FOXA1-203ENST00000553751 DYNLT1P63172 113 aa20.5■□□□□ 0.87
FOXA1-203ENST00000553751 SIM1P81133 766 aaPredicted RBP20.5■□□□□ 0.87
FOXA1-203ENST00000553751 Q6ZSR6 202 aa20.5■□□□□ 0.87
FOXA1-203ENST00000553751 DPPA4Q7L190 304 aa20.5■□□□□ 0.87
FOXA1-203ENST00000553751 TP53I13Q8NBR0 393 aaPredicted RBP20.5■□□□□ 0.87
FOXA1-203ENST00000553751 SEMA3CQ99985 751 aa20.5■□□□□ 0.87
FOXA1-203ENST00000553751 RBM22Q9NW64 420 aaKnown RBP eCLIP20.5■□□□□ 0.878e-7■□□□□ 11.1
FOXA1-203ENST00000553751 COQ6Q9Y2Z9 468 aa20.5■□□□□ 0.87
FOXA1-203ENST00000553751 A0A1W2PQ67 120 aa20.49■□□□□ 0.87
FOXA1-203ENST00000553751 CPP00450 1065 aa20.49■□□□□ 0.87
FOXA1-203ENST00000553751 KRT10P13645 584 aa20.49■□□□□ 0.87
FOXA1-203ENST00000553751 CTNNA1P35221 906 aaKnown RBP20.49■□□□□ 0.87
FOXA1-203ENST00000553751 GRK6P43250 576 aa20.49■□□□□ 0.87
FOXA1-203ENST00000553751 IFI35P80217 286 aaPredicted RBP20.49■□□□□ 0.87
FOXA1-203ENST00000553751 ADCY2Q08462 1091 aa20.49■□□□□ 0.87
FOXA1-203ENST00000553751 ZBTB17Q13105 803 aa20.49■□□□□ 0.87
FOXA1-203ENST00000553751 IHHQ14623 411 aa20.49■□□□□ 0.87
FOXA1-203ENST00000553751 PDK1Q15118 436 aa20.49■□□□□ 0.87
FOXA1-203ENST00000553751 TRIP6Q15654 476 aaKnown RBP20.49■□□□□ 0.87
FOXA1-203ENST00000553751 KIAA1328Q86T90 577 aa20.49■□□□□ 0.87
FOXA1-203ENST00000553751 GATAD2AQ86YP4 633 aa20.49■□□□□ 0.87
FOXA1-203ENST00000553751 PAF1Q8N7H5 531 aa20.49■□□□□ 0.87
FOXA1-203ENST00000553751 LRRC57Q8N9N7 239 aa20.49■□□□□ 0.87
FOXA1-203ENST00000553751 PDCD6IPQ8WUM4 868 aaKnown RBP20.49■□□□□ 0.87
FOXA1-203ENST00000553751 C1QTNF7Q9BXJ2 289 aa20.49■□□□□ 0.87
FOXA1-203ENST00000553751 MBNL1Q9NR56 388 aaKnown RBP20.49■□□□□ 0.87
FOXA1-203ENST00000553751 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.49■□□□□ 0.87
FOXA1-203ENST00000553751 CEP295Q9C0D2 2601 aa20.49■□□□□ 0.87
FOXA1-203ENST00000553751 hCG_1818297A0A087WSY0 165 aa20.48■□□□□ 0.87
FOXA1-203ENST00000553751 A0A0U1RQJ8 604 aa20.48■□□□□ 0.87
FOXA1-203ENST00000553751 KCNK1O00180 336 aa20.48■□□□□ 0.87
FOXA1-203ENST00000553751 PGLSO95336 258 aa20.48■□□□□ 0.87
FOXA1-203ENST00000553751 PMLP29590 882 aa20.48■□□□□ 0.87
FOXA1-203ENST00000553751 RABIFP47224 123 aa20.48■□□□□ 0.87
FOXA1-203ENST00000553751 NAP1L1P55209 391 aaKnown RBP20.48■□□□□ 0.87
FOXA1-203ENST00000553751 GSDMDP57764 484 aa20.48■□□□□ 0.87
FOXA1-203ENST00000553751 PFN3P60673 137 aa20.48■□□□□ 0.87
FOXA1-203ENST00000553751 DSC2Q02487 901 aa20.48■□□□□ 0.87
FOXA1-203ENST00000553751 ITKQ08881 620 aa20.48■□□□□ 0.87
FOXA1-203ENST00000553751 TFDP2Q14188 446 aa20.48■□□□□ 0.87
FOXA1-203ENST00000553751 AGERQ15109 404 aa20.48■□□□□ 0.87
FOXA1-203ENST00000553751 LLGL1Q15334 1064 aa20.48■□□□□ 0.87
FOXA1-203ENST00000553751 TFDP3Q5H9I0 405 aa20.48■□□□□ 0.87
FOXA1-203ENST00000553751 TPRG1LQ5T0D9 272 aa20.48■□□□□ 0.87
FOXA1-203ENST00000553751 KANSL1Q7Z3B3 1105 aa20.48■□□□□ 0.87
FOXA1-203ENST00000553751 DCP2Q8IU60 420 aaKnown RBP20.48■□□□□ 0.87
FOXA1-203ENST00000553751 RCOR2Q8IZ40 523 aa20.48■□□□□ 0.87
FOXA1-203ENST00000553751 EXD1Q8NHP7 514 aa20.48■□□□□ 0.87
FOXA1-203ENST00000553751 ARRDC2Q8TBH0 407 aa20.48■□□□□ 0.87
FOXA1-203ENST00000553751 RHBDD1Q8TEB9 315 aa20.48■□□□□ 0.87
FOXA1-203ENST00000553751 RBM41Q96IZ5 413 aaKnown RBP20.48■□□□□ 0.87
FOXA1-203ENST00000553751 IL12RB2Q99665 862 aa20.48■□□□□ 0.87
FOXA1-203ENST00000553751 B4GALT6Q9UBX8 382 aa20.48■□□□□ 0.87
FOXA1-203ENST00000553751 TRIM10Q9UDY6 481 aa20.48■□□□□ 0.87
FOXA1-203ENST00000553751 TTLL3Q9Y4R7 772 aa20.48■□□□□ 0.87
FOXA1-203ENST00000553751 PCDHB9Q9Y5E1 797 aa20.48■□□□□ 0.87
FOXA1-203ENST00000553751 SPTY2D1-AS1A0A0U1RR47 76 aa20.47■□□□□ 0.87
FOXA1-203ENST00000553751 GRID2IPA4D2P6 1211 aa20.47■□□□□ 0.87
FOXA1-203ENST00000553751 CFAP69A5D8W1 941 aa20.47■□□□□ 0.87
FOXA1-203ENST00000553751 PPP1R12AO14974 1030 aaPredicted RBP20.47■□□□□ 0.87
FOXA1-203ENST00000553751 FZD6O60353 706 aa20.47■□□□□ 0.87
FOXA1-203ENST00000553751 CST8O60676 142 aa20.47■□□□□ 0.87
FOXA1-203ENST00000553751 ZRANB2O95218 330 aaKnown RBP eCLIP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms