RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 IGSF21Q96ID5 467 aa3.39□□□□□ -1.87
VRK1-202ENST00000553683 C1QTNF4Q9BXJ3 329 aa3.39□□□□□ -1.87
VRK1-202ENST00000553683 KRTAP2-2Q9BYT5 123 aa3.39□□□□□ -1.87
VRK1-202ENST00000553683 GAREM1Q9H706 876 aa3.39□□□□□ -1.87
VRK1-202ENST00000553683 MPP6Q9NZW5 540 aa3.39□□□□□ -1.87
VRK1-202ENST00000553683 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.39□□□□□ -1.87
VRK1-202ENST00000553683 KCNG2Q9UJ96 466 aa3.39□□□□□ -1.87
VRK1-202ENST00000553683 PROCRQ9UNN8 238 aa3.39□□□□□ -1.87
VRK1-202ENST00000553683 GOLGA6L9A6NEM1 432 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 TTC36A6NLP5 189 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 NCAM2O15394 837 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 HSPA12AO43301 675 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 TPD52L2O43399 206 aaKnown RBP3.38□□□□□ -1.87
VRK1-202ENST00000553683 KLK8O60259 260 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 ATP2C2O75185 946 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 MMP2P08253 660 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 COX7A2P14406 83 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 AGAP20933 346 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 POU1F1P28069 291 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 CLCN5P51795 746 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 HDAC4P56524 1084 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 CLDN2P57739 230 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 ARHGEF6Q15052 776 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 IZUMO4Q1ZYL8 232 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 PRICKLE4Q2TBC4 344 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 XKR9Q5GH70 373 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 TXNDC8Q6A555 127 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 MOB3CQ70IA8 216 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 LINGO2Q7L985 606 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 EXOC3L1Q86VI1 746 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 RFLNBQ8N5W9 214 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 AGBL3Q8NEM8 1001 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 BEST2Q8NFU1 509 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 PPM1EQ8WY54 764 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 MTBPQ96DY7 904 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 BICD1Q96G01 975 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 HES6Q96HZ4 224 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 SLITRK1Q96PX8 696 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 PSMD1Q99460 953 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 SH3GL2Q99962 352 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 MXRA8Q9BRK3 442 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 H2AFJQ9BTM1 129 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 SLC32A1Q9H598 525 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 WASH6PQ9NQA3 447 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 SNTG1Q9NSN8 517 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 SMARCAL1Q9NZC9 954 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 PDP2Q9P2J9 529 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 SLCO3A1Q9UIG8 710 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 HSF4Q9ULV5 492 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 UTYO14607 1347 aa3.38□□□□□ -1.87
VRK1-202ENST00000553683 SCN5AQ14524 2016 aa3.37□□□□□ -1.87
VRK1-202ENST00000553683 J3KR12 359 aa3.37□□□□□ -1.87
VRK1-202ENST00000553683 TSPAN4O14817 238 aa3.37□□□□□ -1.87
VRK1-202ENST00000553683 LDB3O75112 727 aa3.37□□□□□ -1.87
VRK1-202ENST00000553683 TIPRLO75663 272 aa3.37□□□□□ -1.87
VRK1-202ENST00000553683 RGS11O94810 467 aa3.37□□□□□ -1.87
VRK1-202ENST00000553683 GALTP07902 379 aa3.37□□□□□ -1.87
VRK1-202ENST00000553683 SRCP12931 536 aa3.37□□□□□ -1.87
VRK1-202ENST00000553683 ITGB8P26012 769 aa3.37□□□□□ -1.87
VRK1-202ENST00000553683 HNRNPH1P31943 449 aaKnown RBP3.37□□□□□ -1.87
VRK1-202ENST00000553683 ERVFC1-1P60608 527 aa3.37□□□□□ -1.87
VRK1-202ENST00000553683 ILF3Q12906 894 aaKnown RBP eCLIP3.37□□□□□ -1.87
VRK1-202ENST00000553683 DLG1Q12959 904 aa3.37□□□□□ -1.87
VRK1-202ENST00000553683 COASYQ13057 564 aa3.37□□□□□ -1.87
VRK1-202ENST00000553683 MYBPHQ13203 477 aa3.37□□□□□ -1.87
VRK1-202ENST00000553683 ITGADQ13349 1161 aa3.37□□□□□ -1.87
VRK1-202ENST00000553683 SNTA1Q13424 505 aa3.37□□□□□ -1.87
VRK1-202ENST00000553683 VEPH1Q14D04 833 aa3.37□□□□□ -1.87
VRK1-202ENST00000553683 SLC39A14Q15043 492 aa3.37□□□□□ -1.87
VRK1-202ENST00000553683 ZRSR1Q15695 479 aaKnown RBP3.37□□□□□ -1.87
VRK1-202ENST00000553683 GPR68Q15743 365 aa3.37□□□□□ -1.87
VRK1-202ENST00000553683 TCTN1Q2MV58 587 aa3.37□□□□□ -1.87
VRK1-202ENST00000553683 AMZ1Q400G9 498 aa3.37□□□□□ -1.87
VRK1-202ENST00000553683 ZNF667Q5HYK9 610 aa3.37□□□□□ -1.87
VRK1-202ENST00000553683 INO80CQ6PI98 192 aaPredicted RBP3.37□□□□□ -1.87
VRK1-202ENST00000553683 ZC3HC1Q86WB0 502 aaKnown RBP3.37□□□□□ -1.87
VRK1-202ENST00000553683 LURAP1LQ8IV03 231 aa3.37□□□□□ -1.87
VRK1-202ENST00000553683 KIAA2013Q8IYS2 634 aa3.37□□□□□ -1.87
VRK1-202ENST00000553683 PARP16Q8N5Y8 322 aa3.37□□□□□ -1.87
VRK1-202ENST00000553683 PLD5Q8N7P1 536 aa3.37□□□□□ -1.87
VRK1-202ENST00000553683 TSPYL6Q8N831 410 aa3.37□□□□□ -1.87
VRK1-202ENST00000553683 LILRB1Q8NHL6 650 aaPredicted RBP3.37□□□□□ -1.87
VRK1-202ENST00000553683 ARRDC2Q8TBH0 407 aa3.37□□□□□ -1.87
VRK1-202ENST00000553683 WFIKKN2Q8TEU8 576 aa3.37□□□□□ -1.87
VRK1-202ENST00000553683 ZC3HAV1LQ96H79 300 aaKnown RBP3.37□□□□□ -1.87
VRK1-202ENST00000553683 ADGRG7Q96K78 797 aa3.37□□□□□ -1.87
VRK1-202ENST00000553683 TBATAQ96M53 351 aa3.37□□□□□ -1.87
VRK1-202ENST00000553683 OR1F2PQ96R84 312 aa3.37□□□□□ -1.87
VRK1-202ENST00000553683 BRF2Q9HAW0 419 aa3.37□□□□□ -1.87
VRK1-202ENST00000553683 PCDH9Q9HC56 1237 aa3.37□□□□□ -1.87
VRK1-202ENST00000553683 OCIAD1Q9NX40 245 aa3.37□□□□□ -1.87
VRK1-202ENST00000553683 KCND2Q9NZV8 630 aa3.37□□□□□ -1.87
VRK1-202ENST00000553683 A0A1W2PQM1 296 aa3.36□□□□□ -1.87
VRK1-202ENST00000553683 PLSCR5A0PG75 271 aa3.36□□□□□ -1.87
VRK1-202ENST00000553683 RFPL2O75678 378 aa3.36□□□□□ -1.87
VRK1-202ENST00000553683 TFP02787 698 aa3.36□□□□□ -1.87
VRK1-202ENST00000553683 ETFAP13804 333 aa3.36□□□□□ -1.87
VRK1-202ENST00000553683 XBP1P17861 261 aa3.36□□□□□ -1.87
VRK1-202ENST00000553683 STX2P32856 288 aa3.36□□□□□ -1.87
VRK1-202ENST00000553683 PDLIM4P50479 330 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms