RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 WASH4PA8MWX3 477 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 H3BRB1 525 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 PSMD12O00232 456 aaPredicted RBP5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 HNRNPRO43390 633 aaKnown RBP5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 GPR32O75388 356 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 RNASEH2AO75792 299 aaKnown RBP5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 ZMPSTE24O75844 475 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 SRP72O76094 671 aaKnown RBP5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 IPO13O94829 963 aaKnown RBP5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 OR6B1O95007 311 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 MATN4O95460 622 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 STAMBPO95630 424 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 FYNP06241 537 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 GPIP06744 558 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 PGK2P07205 417 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 SNRPB2P08579 225 aaKnown RBP5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 LTA4HP09960 611 aaKnown RBP5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 CDK4P11802 303 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 IMPDH2P12268 514 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 ENO3P13929 434 aaPredicted RBP5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 ETS2P15036 469 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 CPB1P15086 417 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 PTPN1P18031 435 aaKnown RBP5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 MYF6P23409 242 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 ARNTP27540 789 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 NMBRP28336 390 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 GABRB3P28472 473 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 ADRA1AP35348 466 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 LHX1P48742 406 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 NME5P56597 212 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 LILRA4P59901 499 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 ATP6V0D1P61421 351 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 CDKL1Q00532 357 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 EIF4EBP2Q13542 120 aaPredicted RBP5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 PEX6Q13608 980 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 ITGA7Q13683 1181 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 BTG3Q14201 252 aaPredicted RBP5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 FASTKQ14296 549 aaKnown RBP5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 LPIN1Q14693 890 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 MYBPC3Q14896 1274 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 ACAP2Q15057 778 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 FXNQ16595 210 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 DGKDQ16760 1214 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 FAM83EQ2M2I3 478 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 GLRA4Q5JXX5 417 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 PPM1LQ5SGD2 360 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 C6orf10Q5SRN2 563 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 CERCAMQ5T4B2 595 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 AGAP9Q5VTM2 703 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 BSPRYQ5W0U4 402 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 AFMIDQ63HM1 303 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 REP15Q6BDI9 236 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 DENND5AQ6IQ26 1287 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 LCN8Q6JVE9 175 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 OGFOD2Q6N063 350 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 GADL1Q6ZQY3 521 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 PRR23BQ6ZRT6 265 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 TRIM67Q6ZTA4 783 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 PAQR9Q6ZVX9 377 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 FKBP9P1Q75LS8 142 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 EEPD1Q7L9B9 569 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 BHLHA9Q7RTU4 235 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 CATSPER4Q7RTX7 472 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 CYP2U1Q7Z449 544 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 FAM35AQ86V20 835 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 ZNF354CQ86Y25 554 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 CHCHD4Q8N4Q1 142 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 FIBCD1Q8N539 461 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 MINDY1Q8N5J2 469 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 PCYOX1LQ8NBM8 494 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 LEMD2Q8NC56 503 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 HIPK4Q8NE63 616 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 OR2T34Q8NGX1 318 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 OR2T3Q8NH03 318 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 ZFP28Q8NHY6 868 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 HMGCLL1Q8TB92 370 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 SPPL2BQ8TCT7 592 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 TRPM4Q8TD43 1214 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 KCTD4Q8WVF5 259 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 COPS5Q92905 334 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 NMD3Q96D46 503 aaKnown RBP5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 RMND5BQ96G75 393 aaPredicted RBP5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 UBXN10Q96LJ8 280 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 CNBD2Q96M20 576 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 TCF12Q99081 682 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 PRPF18Q99633 342 aaKnown RBP5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 DOK1Q99704 481 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 HOPXQ9BPY8 73 aaPredicted RBP5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 TBL1YQ9BQ87 522 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 GPATCH1Q9BRR8 931 aaKnown RBP5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 COLEC11Q9BWP8 271 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 SHCBP1LQ9BZQ2 653 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 GRIP2Q9C0E4 1043 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 NXF3Q9H4D5 531 aaKnown RBP5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 POMKQ9H5K3 350 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 TUT1Q9H6E5 874 aaKnown RBP5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 COPS7BQ9H9Q2 264 aaPredicted RBP5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 CAB39LQ9H9S4 337 aa5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 CLK4Q9HAZ1 481 aaKnown RBP5.29□□□□□ -1.56
TMEM55B-204ENST00000553602 ATP13A1Q9HD20 1204 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms