RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 GKP32189 559 aa17.7■□□□□ 0.42
PSEN1-206ENST00000553447 EIF2DP41214 584 aaKnown RBP17.7■□□□□ 0.42
PSEN1-206ENST00000553447 CCNHP51946 323 aaPredicted RBP17.7■□□□□ 0.42
PSEN1-206ENST00000553447 MAGOHP61326 146 aaKnown RBP17.7■□□□□ 0.42
PSEN1-206ENST00000553447 CCDC85BQ15834 202 aaPredicted RBP17.7■□□□□ 0.42
PSEN1-206ENST00000553447 QPCTQ16769 361 aa17.7■□□□□ 0.42
PSEN1-206ENST00000553447 PRPF38BQ5VTL8 546 aaKnown RBP17.7■□□□□ 0.42
PSEN1-206ENST00000553447 ESRP1Q6NXG1 681 aaKnown RBP17.7■□□□□ 0.42
PSEN1-206ENST00000553447 Q6ZVU0 165 aa17.7■□□□□ 0.42
PSEN1-206ENST00000553447 KCNMB4Q86W47 210 aa17.7■□□□□ 0.42
PSEN1-206ENST00000553447 SLC26A11Q86WA9 606 aa17.7■□□□□ 0.42
PSEN1-206ENST00000553447 TERB1Q8NA31 727 aa17.7■□□□□ 0.42
PSEN1-206ENST00000553447 BRSK1Q8TDC3 778 aa17.7■□□□□ 0.42
PSEN1-206ENST00000553447 VOPP1Q96AW1 172 aa17.7■□□□□ 0.42
PSEN1-206ENST00000553447 CHFRQ96EP1 664 aa17.7■□□□□ 0.42
PSEN1-206ENST00000553447 CPEB1Q9BZB8 566 aaKnown RBP17.7■□□□□ 0.42
PSEN1-206ENST00000553447 C20orf96Q9NUD7 363 aaPredicted RBP17.7■□□□□ 0.42
PSEN1-206ENST00000553447 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.7■□□□□ 0.42
PSEN1-206ENST00000553447 IL1RAPL1Q9NZN1 696 aa17.7■□□□□ 0.42
PSEN1-206ENST00000553447 SLC2A6Q9UGQ3 507 aa17.7■□□□□ 0.42
PSEN1-206ENST00000553447 ZNF180Q9UJW8 692 aa17.7■□□□□ 0.42
PSEN1-206ENST00000553447 PCDHB9Q9Y5E1 797 aa17.7■□□□□ 0.42
PSEN1-206ENST00000553447 SPO11Q9Y5K1 396 aa17.7■□□□□ 0.42
PSEN1-206ENST00000553447 REV3LO60673 3130 aa17.7■□□□□ 0.42
PSEN1-206ENST00000553447 BRWD1Q9NSI6 2320 aa17.69■□□□□ 0.42
PSEN1-206ENST00000553447 TTC34A8MYJ7 566 aa17.69■□□□□ 0.42
PSEN1-206ENST00000553447 WASH3PC4AMC7 463 aa17.69■□□□□ 0.42
PSEN1-206ENST00000553447 LDB2O43679 373 aa17.69■□□□□ 0.42
PSEN1-206ENST00000553447 BNIP3LO60238 219 aa17.69■□□□□ 0.42
PSEN1-206ENST00000553447 UGT1A9O60656 530 aa17.69■□□□□ 0.42
PSEN1-206ENST00000553447 POP4O95707 220 aaKnown RBP17.69■□□□□ 0.42
PSEN1-206ENST00000553447 PIRTP0C851 137 aa17.69■□□□□ 0.42
PSEN1-206ENST00000553447 PAMP19021 973 aa17.69■□□□□ 0.42
PSEN1-206ENST00000553447 GRIA4P48058 902 aa17.69■□□□□ 0.42
PSEN1-206ENST00000553447 RPL26P61254 145 aaKnown RBP17.69■□□□□ 0.42
PSEN1-206ENST00000553447 ST8SIA6P61647 398 aa17.69■□□□□ 0.42
PSEN1-206ENST00000553447 RAD51Q06609 339 aa17.69■□□□□ 0.42
PSEN1-206ENST00000553447 NAIF1Q69YI7 327 aaPredicted RBP17.69■□□□□ 0.42
PSEN1-206ENST00000553447 PDPK2PQ6A1A2 396 aa17.69■□□□□ 0.42
PSEN1-206ENST00000553447 KIAA0930Q6ICG6 404 aaPredicted RBP17.69■□□□□ 0.42
PSEN1-206ENST00000553447 DPY19L3Q6ZPD9 716 aa17.69■□□□□ 0.42
PSEN1-206ENST00000553447 PIH1D2Q8WWB5 315 aa17.69■□□□□ 0.42
PSEN1-206ENST00000553447 CDX2Q99626 313 aaPredicted RBP17.69■□□□□ 0.42
PSEN1-206ENST00000553447 BRD9Q9H8M2 597 aa17.69■□□□□ 0.42
PSEN1-206ENST00000553447 UGT1A7Q9HAW7 530 aa17.69■□□□□ 0.42
PSEN1-206ENST00000553447 UGT1A10Q9HAW8 530 aa17.69■□□□□ 0.42
PSEN1-206ENST00000553447 UGT1A8Q9HAW9 530 aa17.69■□□□□ 0.42
PSEN1-206ENST00000553447 RIMKLBQ9ULI2 386 aa17.69■□□□□ 0.42
PSEN1-206ENST00000553447 RPL26L1Q9UNX3 145 aaKnown RBP17.69■□□□□ 0.42
PSEN1-206ENST00000553447 SCN8AQ9UQD0 1980 aa17.68■□□□□ 0.42
PSEN1-206ENST00000553447 C2CD4DB7Z1M9 353 aa17.68■□□□□ 0.42
PSEN1-206ENST00000553447 FAM155BO75949 473 aa17.68■□□□□ 0.42
PSEN1-206ENST00000553447 SLC8A1P32418 973 aa17.68■□□□□ 0.42
PSEN1-206ENST00000553447 RECQLP46063 649 aaPredicted RBP17.68■□□□□ 0.42
PSEN1-206ENST00000553447 ARCN1P48444 511 aaKnown RBP17.68■□□□□ 0.42
PSEN1-206ENST00000553447 EPHB1P54762 984 aa17.68■□□□□ 0.42
PSEN1-206ENST00000553447 GRM3Q14832 879 aa17.68■□□□□ 0.42
PSEN1-206ENST00000553447 SMAD1Q15797 465 aaKnown RBP17.68■□□□□ 0.42
PSEN1-206ENST00000553447 CNGA3Q16281 694 aa17.68■□□□□ 0.42
PSEN1-206ENST00000553447 EXOC3L1Q86VI1 746 aa17.68■□□□□ 0.42
PSEN1-206ENST00000553447 KDM1BQ8NB78 822 aa17.68■□□□□ 0.42
PSEN1-206ENST00000553447 CHST14Q8NCH0 376 aa17.68■□□□□ 0.42
PSEN1-206ENST00000553447 OR2A12Q8NGT7 310 aa17.68■□□□□ 0.42
PSEN1-206ENST00000553447 FAM76AQ8TAV0 307 aa17.68■□□□□ 0.42
PSEN1-206ENST00000553447 PEX13Q92968 403 aa17.68■□□□□ 0.42
PSEN1-206ENST00000553447 ZDHHC6Q9H6R6 413 aa17.68■□□□□ 0.42
PSEN1-206ENST00000553447 HACD3Q9P035 362 aa17.68■□□□□ 0.42
PSEN1-206ENST00000553447 ZFATQ9P243 1243 aa17.68■□□□□ 0.42
PSEN1-206ENST00000553447 SLC17A6Q9P2U8 582 aa17.68■□□□□ 0.42
PSEN1-206ENST00000553447 PLA2G4CQ9UP65 541 aa17.68■□□□□ 0.42
PSEN1-206ENST00000553447 TCF20Q9UGU0 1960 aaKnown RBP17.68■□□□□ 0.42
PSEN1-206ENST00000553447 IQANK1A0A1B0GTG1 560 aa17.67■□□□□ 0.42
PSEN1-206ENST00000553447 KAT7O95251 611 aa17.67■□□□□ 0.42
PSEN1-206ENST00000553447 VAPBO95292 243 aa17.67■□□□□ 0.42
PSEN1-206ENST00000553447 CRTAMO95727 393 aa17.67■□□□□ 0.42
PSEN1-206ENST00000553447 KRT15P19012 456 aa17.67■□□□□ 0.42
PSEN1-206ENST00000553447 NR1D1P20393 614 aa17.67■□□□□ 0.42
PSEN1-206ENST00000553447 ARNTP27540 789 aa17.67■□□□□ 0.42
PSEN1-206ENST00000553447 ACVR1Q04771 509 aa17.67■□□□□ 0.42
PSEN1-206ENST00000553447 SKIV2LQ15477 1246 aaKnown RBP17.67■□□□□ 0.42
PSEN1-206ENST00000553447 TAF1AQ15573 450 aaPredicted RBP17.67■□□□□ 0.42
PSEN1-206ENST00000553447 AAK1Q2M2I8 961 aa17.67■□□□□ 0.42
PSEN1-206ENST00000553447 PREPLQ4J6C6 727 aaPredicted RBP17.67■□□□□ 0.42
PSEN1-206ENST00000553447 FNDC3BQ53EP0 1204 aaKnown RBP17.67■□□□□ 0.42
PSEN1-206ENST00000553447 HSP90AA5PQ58FG0 334 aa17.67■□□□□ 0.42
PSEN1-206ENST00000553447 TEDDM1Q5T9Z0 273 aa17.67■□□□□ 0.42
PSEN1-206ENST00000553447 Q7L0L9 218 aa17.67■□□□□ 0.42
PSEN1-206ENST00000553447 GLT6D1Q7Z4J2 308 aa17.67■□□□□ 0.42
PSEN1-206ENST00000553447 TRABD2AQ86V40 505 aa17.67■□□□□ 0.42
PSEN1-206ENST00000553447 OR13J1Q8NGT2 312 aa17.67■□□□□ 0.42
PSEN1-206ENST00000553447 CSGALNACT1Q8TDX6 532 aa17.67■□□□□ 0.42
PSEN1-206ENST00000553447 MZB1Q8WU39 189 aa17.67■□□□□ 0.42
PSEN1-206ENST00000553447 UCMAQ8WVF2 138 aa17.67■□□□□ 0.42
PSEN1-206ENST00000553447 ECHDC3Q96DC8 303 aa17.67■□□□□ 0.42
PSEN1-206ENST00000553447 ZNF641Q96N77 438 aaPredicted RBP17.67■□□□□ 0.42
PSEN1-206ENST00000553447 SMIM14Q96QK8 99 aa17.67■□□□□ 0.42
PSEN1-206ENST00000553447 HEPHQ9BQS7 1158 aa17.67■□□□□ 0.42
PSEN1-206ENST00000553447 SUV39H2Q9H5I1 410 aa17.67■□□□□ 0.42
PSEN1-206ENST00000553447 IARS2Q9NSE4 1012 aaKnown RBP17.67■□□□□ 0.42
PSEN1-206ENST00000553447 KCTD3Q9Y597 815 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms