RNA–Protein interactions for RNA: ENST00000552691.1

ERBB3-220, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 3

Gene ERBB3, Length 291 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-220ENST00000552691 ARNT2Q9HBZ2 717 aa4.28□□□□□ -1.72
ERBB3-220ENST00000552691 CASS4Q9NQ75 786 aa4.28□□□□□ -1.72
ERBB3-220ENST00000552691 ZDHHC18Q9NUE0 388 aa4.28□□□□□ -1.72
ERBB3-220ENST00000552691 POLR3BQ9NW08 1133 aaPredicted RBP4.28□□□□□ -1.72
ERBB3-220ENST00000552691 PIH1D1Q9NWS0 290 aaKnown RBP4.28□□□□□ -1.72
ERBB3-220ENST00000552691 RAB21Q9UL25 225 aa4.28□□□□□ -1.72
ERBB3-220ENST00000552691 PPM1HQ9ULR3 514 aa4.28□□□□□ -1.72
ERBB3-220ENST00000552691 NFU1Q9UMS0 254 aa4.28□□□□□ -1.72
ERBB3-220ENST00000552691 PHTF1Q9UMS5 762 aa4.28□□□□□ -1.72
ERBB3-220ENST00000552691 SHOC2Q9UQ13 582 aa4.28□□□□□ -1.72
ERBB3-220ENST00000552691 PPIL1Q9Y3C6 166 aa4.28□□□□□ -1.72
ERBB3-220ENST00000552691 SIT1Q9Y3P8 196 aa4.28□□□□□ -1.72
ERBB3-220ENST00000552691 PCDHB9Q9Y5E1 797 aa4.28□□□□□ -1.72
ERBB3-220ENST00000552691 BDP1A6H8Y1 2624 aa4.28□□□□□ -1.72
ERBB3-220ENST00000552691 LRP4O75096 1905 aa4.28□□□□□ -1.72
ERBB3-220ENST00000552691 CACNA1EQ15878 2313 aa4.28□□□□□ -1.72
ERBB3-220ENST00000552691 A0A0J9YYE9 177 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 A0A1W2PP55 124 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 TCRBV21S2A2A0A5A6 115 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 TSPAN11A1L157 253 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 SDR42E2A6NKP2 422 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 C16orf96A6NNT2 1141 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 E7ESA3 106 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 C1QTNF3-AMACRE9PGA6 284 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 AP3B1O00203 1094 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 KPNA3O00505 521 aaPredicted RBP4.27□□□□□ -1.73
ERBB3-220ENST00000552691 MID1O15344 667 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 EIF3HO15372 352 aaKnown RBP eCLIP4.27□□□□□ -1.73
ERBB3-220ENST00000552691 PI15O43692 258 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 RNASEH1O60930 286 aaKnown RBP4.27□□□□□ -1.73
ERBB3-220ENST00000552691 ATG13O75143 517 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 AVILO75366 819 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 ADH1BP00325 375 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 CPP00450 1065 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 PDGFBP01127 241 aaPredicted RBP4.27□□□□□ -1.73
ERBB3-220ENST00000552691 TRBC1P01850 177 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 PRKCGP05129 697 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 FGF1P05230 155 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 TUBBP07437 444 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 FAM153BP0C7A2 387 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 ATXN1LP0C7T5 689 aaKnown RBP4.27□□□□□ -1.73
ERBB3-220ENST00000552691 C7P10643 843 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 ALADP13716 330 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 TIMP2P16035 220 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 TPH1P17752 444 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 CTPS1P17812 591 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 GABRG2P18507 467 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 NDUFV2P19404 249 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 HLA-DPA1P20036 260 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 C5AR1P21730 350 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 MCM3P25205 808 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 ITGB7P26010 798 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 MGAT1P26572 445 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 DRD3P35462 400 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 P2RY2P41231 377 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 TNNT3P45378 269 aaPredicted RBP4.27□□□□□ -1.73
ERBB3-220ENST00000552691 GRIA4P48058 902 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 PSMD8P48556 350 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 NPY2RP49146 381 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 DGKEP52429 567 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 EPHB1P54762 984 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 ARL4CP56559 192 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 SESN2P58004 480 aaPredicted RBP4.27□□□□□ -1.73
ERBB3-220ENST00000552691 RPL26P61254 145 aaKnown RBP4.27□□□□□ -1.73
ERBB3-220ENST00000552691 RPS14P62263 151 aaKnown RBP4.27□□□□□ -1.73
ERBB3-220ENST00000552691 POLR2LP62875 67 aaKnown RBP4.27□□□□□ -1.73
ERBB3-220ENST00000552691 CRADDP78560 199 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 DHX9Q08211 1270 aaKnown RBP4.27□□□□□ -1.73
ERBB3-220ENST00000552691 CDH17Q12864 832 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 MTM1Q13496 603 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 GALNT3Q14435 633 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 STARD3Q14849 445 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 PTPRRQ15256 657 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 CST6Q15828 149 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 HIF1AQ16665 826 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 QPCTQ16769 361 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 UGP2Q16851 508 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 POM121L1PQ3SYA9 428 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 BBS9Q3SYG4 887 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 FAM153CQ494X1 144 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 MSS51Q4VC12 460 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 SIRPB2Q5JXA9 342 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 CERCAMQ5T4B2 595 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 CFAP58Q5T655 872 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 FAM46CQ5VWP2 391 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 DENND2CQ68D51 928 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 ZNF776Q68DI1 518 aaPredicted RBP4.27□□□□□ -1.73
ERBB3-220ENST00000552691 CWF19L1Q69YN2 538 aaKnown RBP4.27□□□□□ -1.73
ERBB3-220ENST00000552691 PARS2Q7L3T8 475 aaKnown RBP4.27□□□□□ -1.73
ERBB3-220ENST00000552691 TTC7BQ86TV6 843 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 GSPT2Q8IYD1 628 aaKnown RBP4.27□□□□□ -1.73
ERBB3-220ENST00000552691 PDIK1LQ8N165 341 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 AGGF1Q8N302 714 aaeCLIP4.27□□□□□ -1.73
ERBB3-220ENST00000552691 MPP5Q8N3R9 675 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 SPEM1Q8N4L4 309 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 ZCCHC9Q8N567 271 aaKnown RBP4.27□□□□□ -1.73
ERBB3-220ENST00000552691 AADATQ8N5Z0 425 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 PAF1Q8N7H5 531 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 LPCAT1Q8NF37 534 aa4.27□□□□□ -1.73
ERBB3-220ENST00000552691 MDGA1Q8NFP4 955 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms