RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 DPTQ07507 201 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 TOP3AQ13472 1001 aaPredicted RBP4.28□□□□□ -1.72
USP44-208ENST00000552440 THOC5Q13769 683 aaKnown RBP4.28□□□□□ -1.72
USP44-208ENST00000552440 GAMTQ14353 236 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 CSHL1Q14406 222 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 STK11Q15831 433 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 TBRG1Q3YBR2 411 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 AMOTQ4VCS5 1084 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 MFSD14BQ5SR56 506 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 RIPPLY2Q5TAB7 128 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 MANEALQ5VSG8 457 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 AGBL4Q5VU57 503 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 KIAA0930Q6ICG6 404 aaPredicted RBP4.28□□□□□ -1.72
USP44-208ENST00000552440 DPY19L2P1Q6NXN4 242 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 SLC36A4Q6YBV0 504 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 ATG9AQ7Z3C6 839 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 BNIPLQ7Z465 357 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 KLHL7Q8IXQ5 586 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 CCDC13Q8IYE1 715 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 ELMOD2Q8IZ81 293 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 MYOCDQ8IZQ8 938 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 FAM133AQ8N9E0 248 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 NHLRC2Q8NBF2 726 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 PLA2G15Q8NCC3 412 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 SHCBP1Q8NEM2 672 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 C17orf50Q8WW18 174 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 RAPGEF5Q92565 580 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 ZKSCAN4Q969J2 545 aaPredicted RBP4.28□□□□□ -1.72
USP44-208ENST00000552440 HDAC11Q96DB2 347 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 MASTLQ96GX5 879 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 EPSTI1Q96J88 318 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 C5orf34Q96MH7 638 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 MAP7D2Q96T17 732 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 GAD1Q99259 594 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 PAFAH2Q99487 392 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 NUP85Q9BW27 656 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 RIBC2Q9H4K1 309 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 SYNPO2LQ9H987 977 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 SYTL2Q9HCH5 934 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 CENPMQ9NSP4 180 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 GDAP2Q9NXN4 497 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 CFAP97Q9P2B7 532 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 XPR1Q9UBH6 696 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 SLC23A1Q9UHI7 598 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 PSME2Q9UL46 239 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 OAZ3Q9UMX2 235 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 RCE1Q9Y256 329 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 DRG1Q9Y295 367 aaKnown RBP4.28□□□□□ -1.72
USP44-208ENST00000552440 TEX264Q9Y6I9 313 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 SALL3Q9BXA9 1300 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 GOLGA6L7A0A1B0GV03 622 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 HTR3EA5X5Y0 456 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 OOEPA6NGQ2 149 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 NPIPB8E9PQR5 432 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 CCDC188H7C350 402 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 IFIT3O14879 490 aaKnown RBP4.28□□□□□ -1.72
USP44-208ENST00000552440 CYP27B1O15528 508 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 ZC3H11AO75152 810 aaKnown RBP eCLIP4.28□□□□□ -1.72
USP44-208ENST00000552440 ERLIN1O75477 346 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 HEXIM1O94992 359 aaKnown RBP4.28□□□□□ -1.72
USP44-208ENST00000552440 ZNF202O95125 648 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 RASAL1O95294 804 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 IPO7O95373 1038 aaKnown RBP4.28□□□□□ -1.72
USP44-208ENST00000552440 CCDC192P0DO97 292 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 TCEA1P23193 301 aaKnown RBP4.28□□□□□ -1.72
USP44-208ENST00000552440 JAK1P23458 1154 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 AHCYP23526 432 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 CHRNA3P32297 505 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 TAGLN2P37802 199 aaKnown RBP4.28□□□□□ -1.72
USP44-208ENST00000552440 NCAPD3P42695 1498 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 RAB28P51157 221 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 ACY1Q03154 408 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 PTH1RQ03431 593 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 CEBPZQ03701 1054 aaKnown RBP4.28□□□□□ -1.72
USP44-208ENST00000552440 DUSP2Q05923 314 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 AOX1Q06278 1338 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 IL24Q13007 206 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 TRDNQ13061 729 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 GRAPQ13588 217 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 NFYCQ13952 458 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 SCRIBQ14160 1630 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 NEDD9Q14511 834 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 RRS1Q15050 365 aaKnown RBP4.28□□□□□ -1.72
USP44-208ENST00000552440 SMN1Q16637 294 aaKnown RBP4.28□□□□□ -1.72
USP44-208ENST00000552440 CCDC142Q17RM4 750 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 RBM20Q5T481 1227 aaKnown RBP4.28□□□□□ -1.72
USP44-208ENST00000552440 AFMIDQ63HM1 303 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 AFTPHQ6ULP2 937 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 KCTD20Q7Z5Y7 419 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 DNAJC10Q8IXB1 793 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 KDM8Q8N371 416 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 ARL14Q8N4G2 192 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 PTGR2Q8N8N7 351 aaPredicted RBP4.28□□□□□ -1.72
USP44-208ENST00000552440 NIPA2Q8N8Q9 360 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 TC2NQ8N9U0 490 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 BBOF1Q8ND07 529 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 MDM1Q8TC05 714 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 SLC2A12Q8TD20 617 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 GANCQ8TET4 914 aa4.28□□□□□ -1.72
USP44-208ENST00000552440 PRR11Q96HE9 360 aaPredicted RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms