RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 IL12RB2Q99665 862 aa10.71□□□□□ -0.69
PTCH1-225ENST00000551845 ATXN2Q99700 1313 aaKnown RBP10.71□□□□□ -0.69
PTCH1-225ENST00000551845 SLC17A9Q9BYT1 436 aa10.71□□□□□ -0.69
PTCH1-225ENST00000551845 PHTF1Q9UMS5 762 aa10.71□□□□□ -0.69
PTCH1-225ENST00000551845 LHX6Q9UPM6 363 aa10.71□□□□□ -0.69
PTCH1-225ENST00000551845 ATP8A1Q9Y2Q0 1164 aa10.71□□□□□ -0.69
PTCH1-225ENST00000551845 PCDHB9Q9Y5E1 797 aa10.71□□□□□ -0.69
PTCH1-225ENST00000551845 TSPAN11A1L157 253 aa10.7□□□□□ -0.7
PTCH1-225ENST00000551845 TMEM8BA6NDV4 472 aa10.7□□□□□ -0.7
PTCH1-225ENST00000551845 UPK3BL1B0FP48 263 aa10.7□□□□□ -0.7
PTCH1-225ENST00000551845 C10orf142B7Z368 130 aa10.7□□□□□ -0.7
PTCH1-225ENST00000551845 UPK3BL2E5RIL1 263 aa10.7□□□□□ -0.7
PTCH1-225ENST00000551845 PRAMEF26H0Y7S4 382 aa10.7□□□□□ -0.7
PTCH1-225ENST00000551845 ARHGAP33O14559 1287 aa10.7□□□□□ -0.7
PTCH1-225ENST00000551845 RIOK3O14730 519 aaKnown RBP10.7□□□□□ -0.7
PTCH1-225ENST00000551845 SLC31A1O15431 190 aa10.7□□□□□ -0.7
PTCH1-225ENST00000551845 HTRA2O43464 458 aaPredicted RBP10.7□□□□□ -0.7
PTCH1-225ENST00000551845 GJB3O75712 270 aa10.7□□□□□ -0.7
PTCH1-225ENST00000551845 ZNF189O75820 626 aaPredicted RBP10.7□□□□□ -0.7
PTCH1-225ENST00000551845 HLA-DQB2P05538 268 aa10.7□□□□□ -0.7
PTCH1-225ENST00000551845 ITIH2P19823 946 aa10.7□□□□□ -0.7
PTCH1-225ENST00000551845 CA4P22748 312 aa10.7□□□□□ -0.7
PTCH1-225ENST00000551845 MSNP26038 577 aaKnown RBP10.7□□□□□ -0.7
PTCH1-225ENST00000551845 ABL2P42684 1182 aa10.7□□□□□ -0.7
PTCH1-225ENST00000551845 CSNK1EP49674 416 aaKnown RBP10.7□□□□□ -0.7
PTCH1-225ENST00000551845 PPP2CBP62714 309 aa10.7□□□□□ -0.7
PTCH1-225ENST00000551845 PPP2CAP67775 309 aa10.7□□□□□ -0.7
PTCH1-225ENST00000551845 FAM193AP78312 1265 aa10.7□□□□□ -0.7
PTCH1-225ENST00000551845 OTUD4Q01804 1114 aaKnown RBP10.7□□□□□ -0.7
PTCH1-225ENST00000551845 TMEM52BQ4KMG9 183 aa10.7□□□□□ -0.7
PTCH1-225ENST00000551845 SEL1L2Q5TEA6 688 aa10.7□□□□□ -0.7
PTCH1-225ENST00000551845 TCEAL6Q6IPX3 200 aa10.7□□□□□ -0.7
PTCH1-225ENST00000551845 B4GALNT4Q76KP1 1039 aa10.7□□□□□ -0.7
PTCH1-225ENST00000551845 ADAT2Q7Z6V5 191 aaKnown RBP10.7□□□□□ -0.7
PTCH1-225ENST00000551845 CNTD1Q8N815 330 aa10.7□□□□□ -0.7
PTCH1-225ENST00000551845 ARRDC2Q8TBH0 407 aa10.7□□□□□ -0.7
PTCH1-225ENST00000551845 ACTL9Q8TC94 416 aa10.7□□□□□ -0.7
PTCH1-225ENST00000551845 ASB12Q8WXK4 309 aa10.7□□□□□ -0.7
PTCH1-225ENST00000551845 KLK6Q92876 244 aa10.7□□□□□ -0.7
PTCH1-225ENST00000551845 TCEAL3Q969E4 200 aa10.7□□□□□ -0.7
PTCH1-225ENST00000551845 COL26A1Q96A83 441 aa10.7□□□□□ -0.7
PTCH1-225ENST00000551845 TEKT5Q96M29 485 aa10.7□□□□□ -0.7
PTCH1-225ENST00000551845 AGAP3Q96P47 875 aa10.7□□□□□ -0.7
PTCH1-225ENST00000551845 ZDHHC5Q9C0B5 715 aa10.7□□□□□ -0.7
PTCH1-225ENST00000551845 KCNF1Q9H3M0 494 aa10.7□□□□□ -0.7
PTCH1-225ENST00000551845 EBF2Q9HAK2 575 aa10.7□□□□□ -0.7
PTCH1-225ENST00000551845 TM9SF3Q9HD45 589 aa10.7□□□□□ -0.7
PTCH1-225ENST00000551845 AASDHPPTQ9NRN7 309 aa10.7□□□□□ -0.7
PTCH1-225ENST00000551845 TRMT1Q9NXH9 659 aaKnown RBP10.7□□□□□ -0.7
PTCH1-225ENST00000551845 RAI2Q9Y5P3 530 aa10.7□□□□□ -0.7
PTCH1-225ENST00000551845 DOCK4Q8N1I0 1966 aa10.7□□□□□ -0.7
PTCH1-225ENST00000551845 CFAP69A5D8W1 941 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 IGLON5A6NGN9 336 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 SRRM3A6NNA2 597 aaPredicted RBP10.69□□□□□ -0.7
PTCH1-225ENST00000551845 KCNK3O14649 394 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 GIPC1O14908 333 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 MAGEC1O60732 1142 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 MMP20O60882 483 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 TM7SF2O76062 418 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 PGLSO95336 258 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 RBP3P10745 1247 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 PTPN3P26045 913 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 CD38P28907 300 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 AKT2P31751 481 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 GRIA4P48058 902 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 C21orf59P57076 290 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 EIF3EP60228 445 aaKnown RBP10.69□□□□□ -0.7
PTCH1-225ENST00000551845 DSC2Q02487 901 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 NIPAL4Q0D2K0 466 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 OVGP1Q12889 678 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 ZBTB17Q13105 803 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 PRKD1Q15139 912 aaPredicted RBP10.69□□□□□ -0.7
PTCH1-225ENST00000551845 NOMO1Q15155 1222 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 ZNF284Q2VY69 593 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 SEL1L3Q68CR1 1132 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 ALG1LQ6GMV1 187 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 NAPEPLDQ6IQ20 393 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 CCDC70Q6NSX1 233 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 DARS2Q6PI48 645 aaKnown RBP10.69□□□□□ -0.7
PTCH1-225ENST00000551845 IL27RAQ6UWB1 636 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 REXO1L1PQ8IX06 675 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 FAM174AQ8TBP5 190 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 ZCCHC14Q8WYQ9 949 aaKnown RBP10.69□□□□□ -0.7
PTCH1-225ENST00000551845 NSMCE3Q96MG7 304 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 ORAI3Q9BRQ5 295 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 HERPUD2Q9BSE4 406 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 EDEM2Q9BV94 578 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 C1QTNF2Q9BXJ5 285 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 SLC25A51Q9H1U9 297 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 CARD9Q9H257 536 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 CAPN10Q9HC96 672 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 PCDH12Q9NPG4 1184 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 TRHDEQ9UKU6 1024 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 ZFR2Q9UPR6 939 aaKnown RBP10.69□□□□□ -0.7
PTCH1-225ENST00000551845 JRKLQ9Y4A0 524 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 HS3ST3A1Q9Y663 406 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 ABCA7Q8IZY2 2146 aa10.69□□□□□ -0.7
PTCH1-225ENST00000551845 VILLO15195 856 aa10.68□□□□□ -0.7
PTCH1-225ENST00000551845 KIF5CO60282 957 aa10.68□□□□□ -0.7
PTCH1-225ENST00000551845 LZTS3O60299 673 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms