RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 FAM171A1Q5VUB5 890 aa5.22□□□□□ -1.57
SCAF11-214ENST00000550893 RESP18Q5W5W9 173 aa5.22□□□□□ -1.57
SCAF11-214ENST00000550893 JADE1Q6IE81 842 aa5.22□□□□□ -1.57
SCAF11-214ENST00000550893 C15orf39Q6ZRI6 1047 aa5.22□□□□□ -1.57
SCAF11-214ENST00000550893 ZNF720Q7Z2F6 126 aa5.22□□□□□ -1.57
SCAF11-214ENST00000550893 TMEM105Q8N8V8 129 aa5.22□□□□□ -1.57
SCAF11-214ENST00000550893 B3GALNT2Q8NCR0 500 aa5.22□□□□□ -1.57
SCAF11-214ENST00000550893 ITFG1Q8TB96 612 aa5.22□□□□□ -1.57
SCAF11-214ENST00000550893 NELL1Q92832 810 aa5.22□□□□□ -1.57
SCAF11-214ENST00000550893 CASP10Q92851 521 aa5.22□□□□□ -1.57
SCAF11-214ENST00000550893 TCEAL4Q96EI5 215 aa5.22□□□□□ -1.57
SCAF11-214ENST00000550893 MVB12AQ96EY5 273 aa5.22□□□□□ -1.57
SCAF11-214ENST00000550893 RPGRIP1Q96KN7 1286 aa5.22□□□□□ -1.57
SCAF11-214ENST00000550893 LRRC3BQ96PB8 259 aa5.22□□□□□ -1.57
SCAF11-214ENST00000550893 CNPPD1Q9BV87 410 aa5.22□□□□□ -1.57
SCAF11-214ENST00000550893 TINAGL1Q9GZM7 467 aaPredicted RBP5.22□□□□□ -1.57
SCAF11-214ENST00000550893 NT5C3AQ9H0P0 336 aa5.22□□□□□ -1.57
SCAF11-214ENST00000550893 SFXN1Q9H9B4 322 aa5.22□□□□□ -1.57
SCAF11-214ENST00000550893 WDR6Q9NNW5 1121 aaKnown RBP5.22□□□□□ -1.57
SCAF11-214ENST00000550893 UBN1Q9NPG3 1134 aa5.22□□□□□ -1.57
SCAF11-214ENST00000550893 TMLHEQ9NVH6 421 aa5.22□□□□□ -1.57
SCAF11-214ENST00000550893 ASB6Q9NWX5 421 aa5.22□□□□□ -1.57
SCAF11-214ENST00000550893 DLGAP2Q9P1A6 1054 aa5.22□□□□□ -1.57
SCAF11-214ENST00000550893 SLC17A6Q9P2U8 582 aa5.22□□□□□ -1.57
SCAF11-214ENST00000550893 DNMT3BQ9UBC3 853 aaKnown RBP5.22□□□□□ -1.57
SCAF11-214ENST00000550893 ZDHHC8Q9ULC8 765 aa5.22□□□□□ -1.57
SCAF11-214ENST00000550893 PCDHA7Q9UN72 937 aa5.22□□□□□ -1.57
SCAF11-214ENST00000550893 PLXND1Q9Y4D7 1925 aa5.22□□□□□ -1.57
SCAF11-214ENST00000550893 SF3B1O75533 1304 aaKnown RBP eCLIP5.22□□□□□ -1.57
SCAF11-214ENST00000550893 ARHGEF37A1IGU5 675 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 VWC2LB2RUY7 222 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 SPTLC2O15270 562 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 OGTO15294 1046 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 BMP15O95972 392 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 C1RP00736 705 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 AHSGP02765 367 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 ALDH2P05091 517 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 URODP06132 367 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 ELFN1P0C7U0 828 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 PF4V1P10720 104 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 HARSP12081 509 aaKnown RBP5.21□□□□□ -1.58
SCAF11-214ENST00000550893 GLULP15104 373 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 CEBPBP17676 345 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 ATF6P18850 670 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 CHRM3P20309 590 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 CD38P28907 300 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 HOXC13P31276 330 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 GRIA3P42263 894 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 ACOT2P49753 483 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 MRPS21P82921 87 aaKnown RBP5.21□□□□□ -1.58
SCAF11-214ENST00000550893 RNASELQ05823 741 aaKnown RBP5.21□□□□□ -1.58
SCAF11-214ENST00000550893 ITIH3Q06033 890 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 TUBB3Q13509 450 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 CUL4BQ13620 913 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 USP41Q3LFD5 358 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 L1TD1Q5T7N2 865 aaKnown RBP5.21□□□□□ -1.58
SCAF11-214ENST00000550893 SPATA1Q5VX52 437 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 C9orf57Q5W0N0 161 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 USP37Q86T82 979 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 TMEM150AQ86TG1 271 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 PALB2Q86YC2 1186 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 BRSK2Q8IWQ3 736 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 PDILTQ8N807 584 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 PSD4Q8NDX1 1056 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 STKLD1Q8NE28 680 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 OR5B17Q8NGF7 314 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 SCFD1Q8WVM8 642 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 KBTBD7Q8WVZ9 684 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 FGF14Q92915 247 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 VOPP1Q96AW1 172 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 IFT74Q96LB3 600 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 SPATA5L1Q9BVQ7 753 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 PANK2Q9BZ23 570 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 PLA2G2FQ9BZM2 168 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 PARVGQ9HBI0 331 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 ZNF334Q9HCZ1 680 aaPredicted RBP5.21□□□□□ -1.58
SCAF11-214ENST00000550893 MRPL17Q9NRX2 175 aaKnown RBP5.21□□□□□ -1.58
SCAF11-214ENST00000550893 PNPOQ9NVS9 261 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 TBC1D7Q9P0N9 293 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 EPS15L1Q9UBC2 864 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 FBXL5Q9UKA1 691 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 RCOR1Q9UKL0 485 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 CDY1Q9Y6F8 540 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 SPAG17Q6Q759 2223 aa5.21□□□□□ -1.58
SCAF11-214ENST00000550893 hCG_2014768A0A024R1R8 64 aa5.2□□□□□ -1.58
SCAF11-214ENST00000550893 CCDC151A5D8V7 595 aa5.2□□□□□ -1.58
SCAF11-214ENST00000550893 TMEM221A6NGB7 291 aa5.2□□□□□ -1.58
SCAF11-214ENST00000550893 LRRC3CA6NJW4 275 aa5.2□□□□□ -1.58
SCAF11-214ENST00000550893 M0R296 226 aa5.2□□□□□ -1.58
SCAF11-214ENST00000550893 HNRNPDLO14979 420 aaKnown RBP5.2□□□□□ -1.58
SCAF11-214ENST00000550893 CCL16O15467 120 aa5.2□□□□□ -1.58
SCAF11-214ENST00000550893 PI15O43692 258 aa5.2□□□□□ -1.58
SCAF11-214ENST00000550893 SOAT2O75908 522 aa5.2□□□□□ -1.58
SCAF11-214ENST00000550893 OAZ2O95190 189 aa5.2□□□□□ -1.58
SCAF11-214ENST00000550893 GLUD1P00367 558 aa5.2□□□□□ -1.58
SCAF11-214ENST00000550893 CLTAP09496 248 aa5.2□□□□□ -1.58
SCAF11-214ENST00000550893 ZNF37AP17032 561 aaPredicted RBP5.2□□□□□ -1.58
SCAF11-214ENST00000550893 CYP3A5P20815 502 aa5.2□□□□□ -1.58
SCAF11-214ENST00000550893 HOXA9P31269 272 aa5.2□□□□□ -1.58
SCAF11-214ENST00000550893 OR1D2P34982 312 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms