RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 SUPT20HL2P0C7V6 817 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 MLNP12872 115 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 ADSLP30566 484 aaPredicted RBP12.18□□□□□ -0.46
VDR-208ENST00000550325 HOXD11P31277 338 aaPredicted RBP12.18□□□□□ -0.46
VDR-208ENST00000550325 CDH13P55290 713 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 GJA9P57773 515 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 POU6F1Q14863 301 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 SUPT20HL1Q3ZLR7 823 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 DACT2Q5SW24 774 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 TMTC4Q5T4D3 741 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 PPP1R26Q5T8A7 1209 aaPredicted RBP12.18□□□□□ -0.46
VDR-208ENST00000550325 ANKRD13AQ8IZ07 590 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 PSD4Q8NDX1 1056 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 ELMO1Q92556 727 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 ZNF347Q96SE7 839 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 LTB4R2Q9NPC1 389 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 PDLIM7Q9NR12 457 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.18□□□□□ -0.46
VDR-208ENST00000550325 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.18□□□□□ -0.46
VDR-208ENST00000550325 ERVK-11Q9UQG0 969 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 PTGDR2Q9Y5Y4 395 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 DLGAP1O14490 977 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 STMN1P16949 149 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 TRPC1P48995 793 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 PLA2G16P53816 162 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 BCAT1P54687 386 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 RPS3AP61247 264 aaKnown RBP12.18□□□□□ -0.46
VDR-208ENST00000550325 INAVAQ3KP66 663 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 VASH1Q7L8A9 365 aaPredicted RBP12.18□□□□□ -0.46
VDR-208ENST00000550325 C1orf127Q8N9H9 656 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 TXNDC5Q8NBS9 432 aaKnown RBP12.18□□□□□ -0.46
VDR-208ENST00000550325 CSF3RQ99062 836 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 CCM2LQ9NUG4 571 aaPredicted RBP12.18□□□□□ -0.46
VDR-208ENST00000550325 KIAA1522Q9P206 1035 aaPredicted RBP12.18□□□□□ -0.46
VDR-208ENST00000550325 MTF2Q9Y483 593 aaPredicted RBP12.18□□□□□ -0.46
VDR-208ENST00000550325 A0A0J9YYE9 177 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 NME4O00746 187 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 CILPO75339 1184 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 KCNA2P16389 499 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 NEK2P51955 445 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 SLC6A3Q01959 620 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 NSUN2Q08J23 767 aaKnown RBP eCLIP12.18□□□□□ -0.46
VDR-208ENST00000550325 OXA1LQ15070 435 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 STRIP1Q5VSL9 837 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 R3HCC1LQ7Z5L2 792 aaKnown RBP12.18□□□□□ -0.46
VDR-208ENST00000550325 VSIG10LQ86VR7 867 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 ATG4CQ96DT6 458 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 FUNDC2Q9BWH2 189 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 IL22Q9GZX6 179 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 SUN2Q9UH99 717 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 PCDHGA3Q9Y5H0 932 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 ADGRA2Q96PE1 1338 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 H0Y858 1186 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 SLC22A2O15244 555 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 BCAS1O75363 584 aaPredicted RBP12.18□□□□□ -0.46
VDR-208ENST00000550325 MFN2O95140 757 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 NR2C2P49116 596 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 COPZ1P61923 177 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 PPIL2Q13356 520 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 AKAP14Q86UN6 197 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 CUZD1Q86UP6 607 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 TBCBQ99426 244 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 FTHL17Q9BXU8 183 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 SEZ6LQ9BYH1 1024 aa12.18□□□□□ -0.46
VDR-208ENST00000550325 PDGFDQ9GZP0 370 aaPredicted RBP12.18□□□□□ -0.46
VDR-208ENST00000550325 IL18RAPO95256 599 aa12.17□□□□□ -0.46
VDR-208ENST00000550325 ARPC4P59998 168 aa12.17□□□□□ -0.46
VDR-208ENST00000550325 TRIM32Q13049 653 aa12.17□□□□□ -0.46
VDR-208ENST00000550325 HSDL1Q3SXM5 330 aa12.17□□□□□ -0.46
VDR-208ENST00000550325 RABL3Q5HYI8 236 aa12.17□□□□□ -0.46
VDR-208ENST00000550325 ATF7IP2Q5U623 682 aa12.17□□□□□ -0.46
VDR-208ENST00000550325 RSBN1Q5VWQ0 802 aaPredicted RBP12.17□□□□□ -0.46
VDR-208ENST00000550325 ZNF773Q6PK81 442 aa12.17□□□□□ -0.46
VDR-208ENST00000550325 CCDC103Q8IW40 242 aa12.17□□□□□ -0.46
VDR-208ENST00000550325 SULF1Q8IWU6 871 aa12.17□□□□□ -0.46
VDR-208ENST00000550325 OR7A2PQ8NGA2 310 aa12.17□□□□□ -0.46
VDR-208ENST00000550325 OR13F1Q8NGS4 319 aa12.17□□□□□ -0.46
VDR-208ENST00000550325 OR6B3Q8NGW1 331 aa12.17□□□□□ -0.46
VDR-208ENST00000550325 SPATA17Q96L03 361 aa12.17□□□□□ -0.46
VDR-208ENST00000550325 NT5C1AQ9BXI3 368 aa12.17□□□□□ -0.46
VDR-208ENST00000550325 RNF38Q9H0F5 515 aa12.17□□□□□ -0.46
VDR-208ENST00000550325 TNFRSF12AQ9NP84 129 aa12.17□□□□□ -0.46
VDR-208ENST00000550325 COL16A1Q07092 1604 aaPredicted RBP12.17□□□□□ -0.46
VDR-208ENST00000550325 FAM95CA0A1B0GW59 222 aa12.17□□□□□ -0.46
VDR-208ENST00000550325 LACTBL1A8MY62 500 aa12.17□□□□□ -0.46
VDR-208ENST00000550325 FAM155AB1AL88 458 aaPredicted RBP12.17□□□□□ -0.46
VDR-208ENST00000550325 GNGT2O14610 69 aa12.17□□□□□ -0.46
VDR-208ENST00000550325 ARPC2O15144 300 aa12.17□□□□□ -0.46
VDR-208ENST00000550325 HLCSP50747 726 aa12.17□□□□□ -0.46
VDR-208ENST00000550325 TMBIM6P55061 237 aa12.17□□□□□ -0.46
VDR-208ENST00000550325 SURF1Q15526 300 aa12.17□□□□□ -0.46
VDR-208ENST00000550325 ABHD15Q6UXT9 468 aa12.17□□□□□ -0.46
VDR-208ENST00000550325 RDM1Q8NG50 284 aa12.17□□□□□ -0.46
VDR-208ENST00000550325 CALML6Q8TD86 181 aa12.17□□□□□ -0.46
VDR-208ENST00000550325 NSUN6Q8TEA1 469 aaKnown RBP12.17□□□□□ -0.46
VDR-208ENST00000550325 TRAPPC12Q8WVT3 735 aa12.17□□□□□ -0.46
VDR-208ENST00000550325 ZNF385DQ9H6B1 395 aa12.17□□□□□ -0.46
VDR-208ENST00000550325 PARVBQ9HBI1 364 aa12.17□□□□□ -0.46
VDR-208ENST00000550325 SIX4Q9UIU6 781 aa12.17□□□□□ -0.46
VDR-208ENST00000550325 RAD54BQ9Y620 910 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms