RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 TRAFD1O14545 582 aaPredicted RBP17.35■□□□□ 0.37
CHMP1A-208ENST00000550102 APOL1O14791 398 aa17.35■□□□□ 0.37
CHMP1A-208ENST00000550102 NEBLO76041 1014 aa17.35■□□□□ 0.37
CHMP1A-208ENST00000550102 CPP00450 1065 aa17.35■□□□□ 0.37
CHMP1A-208ENST00000550102 TNNT1P13805 278 aa17.35■□□□□ 0.37
CHMP1A-208ENST00000550102 CCNCP24863 283 aa17.35■□□□□ 0.37
CHMP1A-208ENST00000550102 IGFALSP35858 605 aa17.35■□□□□ 0.37
CHMP1A-208ENST00000550102 MAXP61244 160 aa17.35■□□□□ 0.37
CHMP1A-208ENST00000550102 PLD5Q8N7P1 536 aa17.35■□□□□ 0.37
CHMP1A-208ENST00000550102 MAML1Q92585 1016 aa17.35■□□□□ 0.37
CHMP1A-208ENST00000550102 CENPTQ96BT3 561 aa17.35■□□□□ 0.37
CHMP1A-208ENST00000550102 IFT43Q96FT9 208 aa17.35■□□□□ 0.37
CHMP1A-208ENST00000550102 BMFQ96LC9 184 aa17.35■□□□□ 0.37
CHMP1A-208ENST00000550102 POLR1EQ9GZS1 481 aaKnown RBP17.35■□□□□ 0.37
CHMP1A-208ENST00000550102 NOD2Q9HC29 1040 aa17.35■□□□□ 0.37
CHMP1A-208ENST00000550102 DTLQ9NZJ0 730 aa17.35■□□□□ 0.37
CHMP1A-208ENST00000550102 AMACRQ9UHK6 382 aa17.35■□□□□ 0.37
CHMP1A-208ENST00000550102 EPN1Q9Y6I3 576 aaPredicted RBP17.35■□□□□ 0.37
CHMP1A-208ENST00000550102 GOLGA4Q13439 2230 aaKnown RBP17.35■□□□□ 0.37
CHMP1A-208ENST00000550102 TTC24A2A3L6 582 aaPredicted RBP17.34■□□□□ 0.37
CHMP1A-208ENST00000550102 MATN3O15232 486 aa17.34■□□□□ 0.37
CHMP1A-208ENST00000550102 HTRA2O43464 458 aaPredicted RBP17.34■□□□□ 0.37
CHMP1A-208ENST00000550102 TNFSF14O43557 240 aa17.34■□□□□ 0.37
CHMP1A-208ENST00000550102 PRKCGP05129 697 aa17.34■□□□□ 0.37
CHMP1A-208ENST00000550102 ZFXP17010 805 aaPredicted RBP17.34■□□□□ 0.37
CHMP1A-208ENST00000550102 NFKBIAP25963 317 aa17.34■□□□□ 0.37
CHMP1A-208ENST00000550102 LIG3P49916 1009 aa17.34■□□□□ 0.37
CHMP1A-208ENST00000550102 PFN3P60673 137 aa17.34■□□□□ 0.37
CHMP1A-208ENST00000550102 IRF4Q15306 451 aa17.34■□□□□ 0.37
CHMP1A-208ENST00000550102 SLC9A4Q6AI14 798 aa17.34■□□□□ 0.37
CHMP1A-208ENST00000550102 DPPA4Q7L190 304 aa17.34■□□□□ 0.37
CHMP1A-208ENST00000550102 KANSL1Q7Z3B3 1105 aa17.34■□□□□ 0.37
CHMP1A-208ENST00000550102 PARGQ86W56 976 aa17.34■□□□□ 0.37
CHMP1A-208ENST00000550102 RFX6Q8HWS3 928 aa17.34■□□□□ 0.37
CHMP1A-208ENST00000550102 CCNYQ8ND76 341 aa17.34■□□□□ 0.37
CHMP1A-208ENST00000550102 PDCD6IPQ8WUM4 868 aaKnown RBP17.34■□□□□ 0.37
CHMP1A-208ENST00000550102 NSMCE3Q96MG7 304 aa17.34■□□□□ 0.37
CHMP1A-208ENST00000550102 MAK16Q9BXY0 300 aaKnown RBP17.34■□□□□ 0.37
CHMP1A-208ENST00000550102 GOLPH3Q9H4A6 298 aa17.34■□□□□ 0.37
CHMP1A-208ENST00000550102 EPG5Q9HCE0 2579 aa17.34■□□□□ 0.37
CHMP1A-208ENST00000550102 IMPACTQ9P2X3 320 aa17.34■□□□□ 0.37
CHMP1A-208ENST00000550102 TFR2Q9UP52 801 aa17.34■□□□□ 0.37
CHMP1A-208ENST00000550102 COQ6Q9Y2Z9 468 aa17.34■□□□□ 0.37
CHMP1A-208ENST00000550102 TTLL3Q9Y4R7 772 aa17.34■□□□□ 0.37
CHMP1A-208ENST00000550102 PCDHGC4Q9Y5F7 938 aa17.34■□□□□ 0.37
CHMP1A-208ENST00000550102 HEY1Q9Y5J3 304 aa17.34■□□□□ 0.37
CHMP1A-208ENST00000550102 FRYQ5TBA9 3013 aa17.33■□□□□ 0.37
CHMP1A-208ENST00000550102 SPTY2D1-AS1A0A0U1RR47 76 aa17.33■□□□□ 0.36
CHMP1A-208ENST00000550102 CFAP69A5D8W1 941 aa17.33■□□□□ 0.36
CHMP1A-208ENST00000550102 TOR1BO14657 336 aa17.33■□□□□ 0.36
CHMP1A-208ENST00000550102 SDC3O75056 442 aa17.33■□□□□ 0.36
CHMP1A-208ENST00000550102 ELFN1P0C7U0 828 aa17.33■□□□□ 0.36
CHMP1A-208ENST00000550102 CCNB1P14635 433 aa17.33■□□□□ 0.36
CHMP1A-208ENST00000550102 THOP1P52888 689 aa17.33■□□□□ 0.36
CHMP1A-208ENST00000550102 ITKQ08881 620 aa17.33■□□□□ 0.36
CHMP1A-208ENST00000550102 TRAF2Q12933 501 aa17.33■□□□□ 0.36
CHMP1A-208ENST00000550102 RALGDSQ12967 914 aa17.33■□□□□ 0.36
CHMP1A-208ENST00000550102 PDE1CQ14123 709 aaPredicted RBP17.33■□□□□ 0.36
CHMP1A-208ENST00000550102 FZD2Q14332 565 aa17.33■□□□□ 0.36
CHMP1A-208ENST00000550102 LRRC14Q15048 493 aa17.33■□□□□ 0.36
CHMP1A-208ENST00000550102 ALG1LQ6GMV1 187 aa17.33■□□□□ 0.36
CHMP1A-208ENST00000550102 CCDC13Q8IYE1 715 aa17.33■□□□□ 0.36
CHMP1A-208ENST00000550102 TP53I13Q8NBR0 393 aaPredicted RBP17.33■□□□□ 0.36
CHMP1A-208ENST00000550102 RNF25Q96BH1 459 aaPredicted RBP17.33■□□□□ 0.36
CHMP1A-208ENST00000550102 CALR3Q96L12 384 aaKnown RBP17.33■□□□□ 0.36
CHMP1A-208ENST00000550102 BAG1Q99933 345 aaPredicted RBP17.33■□□□□ 0.36
CHMP1A-208ENST00000550102 SEMA3CQ99985 751 aa17.33■□□□□ 0.36
CHMP1A-208ENST00000550102 DNAJC28Q9NX36 388 aa17.33■□□□□ 0.36
CHMP1A-208ENST00000550102 WASF3Q9UPY6 502 aa17.33■□□□□ 0.36
CHMP1A-208ENST00000550102 ALG6Q9Y672 507 aa17.33■□□□□ 0.36
CHMP1A-208ENST00000550102 IGF2RP11717 2491 aa17.33■□□□□ 0.36
CHMP1A-208ENST00000550102 GOLGA6L6A8MZA4 724 aa17.32■□□□□ 0.36
CHMP1A-208ENST00000550102 H3BM21 787 aa17.32■□□□□ 0.36
CHMP1A-208ENST00000550102 PPP1R12AO14974 1030 aaPredicted RBP17.32■□□□□ 0.36
CHMP1A-208ENST00000550102 HYAL3O43820 417 aaPredicted RBP17.32■□□□□ 0.36
CHMP1A-208ENST00000550102 LZTS3O60299 673 aaPredicted RBP17.32■□□□□ 0.36
CHMP1A-208ENST00000550102 ATXN1LP0C7T5 689 aaKnown RBP17.32■□□□□ 0.36
CHMP1A-208ENST00000550102 NME1P15531 152 aaKnown RBP17.32■□□□□ 0.36
CHMP1A-208ENST00000550102 CA4P22748 312 aa17.32■□□□□ 0.36
CHMP1A-208ENST00000550102 HNRNPKP61978 463 aaKnown RBP eCLIP17.32■□□□□ 0.365e-9■■■■■ 29.4
CHMP1A-208ENST00000550102 YPEL5P62699 121 aa17.32■□□□□ 0.36
CHMP1A-208ENST00000550102 SEMG2Q02383 582 aa17.32■□□□□ 0.36
CHMP1A-208ENST00000550102 PPIDQ08752 370 aaKnown RBP17.32■□□□□ 0.36
CHMP1A-208ENST00000550102 SLC10A2Q12908 348 aaPredicted RBP17.32■□□□□ 0.36
CHMP1A-208ENST00000550102 BNIP3Q12983 259 aa17.32■□□□□ 0.36
CHMP1A-208ENST00000550102 AGERQ15109 404 aa17.32■□□□□ 0.36
CHMP1A-208ENST00000550102 PDK1Q15118 436 aa17.32■□□□□ 0.36
CHMP1A-208ENST00000550102 ARMC12Q5T9G4 340 aa17.32■□□□□ 0.36
CHMP1A-208ENST00000550102 MFSD7Q6UXD7 560 aa17.32■□□□□ 0.36
CHMP1A-208ENST00000550102 RAD9BQ6WBX8 426 aa17.32■□□□□ 0.36
CHMP1A-208ENST00000550102 KDM7AQ6ZMT4 941 aa17.32■□□□□ 0.36
CHMP1A-208ENST00000550102 RAB44Q7Z6P3 723 aaPredicted RBP17.32■□□□□ 0.36
CHMP1A-208ENST00000550102 DAAM2Q86T65 1068 aa17.32■□□□□ 0.36
CHMP1A-208ENST00000550102 EID2Q8N6I1 236 aa17.32■□□□□ 0.36
CHMP1A-208ENST00000550102 RBM22Q9NW64 420 aaKnown RBP eCLIP17.32■□□□□ 0.36
CHMP1A-208ENST00000550102 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.32■□□□□ 0.36
CHMP1A-208ENST00000550102 PIAS2O75928 621 aa17.31■□□□□ 0.36
CHMP1A-208ENST00000550102 PGLSO95336 258 aa17.31■□□□□ 0.36
CHMP1A-208ENST00000550102 LDOC1O95751 146 aaPredicted RBP17.31■□□□□ 0.36
CHMP1A-208ENST00000550102 HLA-DQB2P05538 268 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms