RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 C16orf72Q14CZ0 275 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 C3orf58Q8NDZ4 430 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 AGO3Q9H9G7 860 aaKnown RBP14.25□□□□□ -0.13
CACNB3-209ENST00000548860 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.25□□□□□ -0.13
CACNB3-209ENST00000548860 PADI3Q9ULW8 664 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 PSMD13Q9UNM6 376 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 HEMK1Q9Y5R4 338 aaPredicted RBP14.25□□□□□ -0.13
CACNB3-209ENST00000548860 TTC3P53804 2025 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 COL11A2P13942 1736 aaPredicted RBP14.25□□□□□ -0.13
CACNB3-209ENST00000548860 AXIN1O15169 862 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 CRTAMO95727 393 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 S100BP04271 92 aaPredicted RBP14.25□□□□□ -0.13
CACNB3-209ENST00000548860 MLNP12872 115 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 RPL17P18621 184 aaKnown RBP14.25□□□□□ -0.13
CACNB3-209ENST00000548860 CREB5Q02930 508 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 CRYBG2Q8N1P7 616 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 GPR63Q9BZJ6 419 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 GMIPQ9P107 970 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 MAGEB16A2A368 324 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 MYO1GB0I1T2 1018 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 DPYSL4O14531 572 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 TRAFD1O14545 582 aaPredicted RBP14.25□□□□□ -0.13
CACNB3-209ENST00000548860 STX7O15400 261 aaKnown RBP14.25□□□□□ -0.13
CACNB3-209ENST00000548860 LTA4HP09960 611 aaKnown RBP14.25□□□□□ -0.13
CACNB3-209ENST00000548860 SLC2A3P11169 496 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 ELNP15502 786 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 AOC1P19801 751 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 HMOX2P30519 316 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 LBRQ14739 615 aaKnown RBP14.25□□□□□ -0.13
CACNB3-209ENST00000548860 CCDC81Q6ZN84 652 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 ZNF598Q86UK7 904 aaKnown RBP14.25□□□□□ -0.13
CACNB3-209ENST00000548860 ARHGAP18Q8N392 663 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 ZNF513Q8N8E2 541 aaPredicted RBP14.25□□□□□ -0.13
CACNB3-209ENST00000548860 OR7D4Q8NG98 312 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 FIG4Q92562 907 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 PPM1MQ96MI6 270 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 OXSMQ9NWU1 459 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 ARHGAP10A1A4S6 786 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 ENPP3O14638 875 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 SNRPB2P08579 225 aaKnown RBP14.25□□□□□ -0.13
CACNB3-209ENST00000548860 RENBPP51606 427 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 ATN1P54259 1190 aaPredicted RBP14.25□□□□□ -0.13
CACNB3-209ENST00000548860 LSM3P62310 102 aaKnown RBP14.25□□□□□ -0.13
CACNB3-209ENST00000548860 DYNC1I2Q13409 638 aaKnown RBP14.25□□□□□ -0.13
CACNB3-209ENST00000548860 NR6A1Q15406 480 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 PTPRNQ16849 979 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 PLA2G4EQ3MJ16 856 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 HECTD2Q5U5R9 776 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 PTRHD1Q6GMV3 140 aaKnown RBP14.25□□□□□ -0.13
CACNB3-209ENST00000548860 FBXO39Q8N4B4 442 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 FBXO30Q8TB52 745 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 TSPAN17Q96FV3 270 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 NSUN5Q96P11 429 aaKnown RBP14.25□□□□□ -0.13
CACNB3-209ENST00000548860 C17orf80Q9BSJ5 609 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 MARCH2Q9P0N8 246 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 PKP3Q9Y446 797 aa14.25□□□□□ -0.13
CACNB3-209ENST00000548860 MCM3APO60318 1980 aa14.24□□□□□ -0.13
CACNB3-209ENST00000548860 CAPN14A8MX76 684 aa14.24□□□□□ -0.13
CACNB3-209ENST00000548860 H3BSA7 217 aa14.24□□□□□ -0.13
CACNB3-209ENST00000548860 AHCYL1O43865 530 aa14.24□□□□□ -0.13
CACNB3-209ENST00000548860 KCNA5P22460 613 aa14.24□□□□□ -0.13
CACNB3-209ENST00000548860 RAP1GDS1P52306 607 aa14.24□□□□□ -0.13
CACNB3-209ENST00000548860 PPIDQ08752 370 aaKnown RBP14.24□□□□□ -0.13
CACNB3-209ENST00000548860 MAPRE2Q15555 327 aa14.24□□□□□ -0.13
CACNB3-209ENST00000548860 KIAA0319Q5VV43 1072 aa14.24□□□□□ -0.13
CACNB3-209ENST00000548860 C16orf87Q6PH81 154 aa14.24□□□□□ -0.13
CACNB3-209ENST00000548860 CCDC117Q8IWD4 279 aaPredicted RBP14.24□□□□□ -0.13
CACNB3-209ENST00000548860 RP9Q8TA86 221 aaKnown RBP14.24□□□□□ -0.13
CACNB3-209ENST00000548860 RTKNQ9BST9 563 aa14.24□□□□□ -0.13
CACNB3-209ENST00000548860 RRAGCQ9HB90 399 aa14.24□□□□□ -0.13
CACNB3-209ENST00000548860 PLAC1Q9HBJ0 212 aa14.24□□□□□ -0.13
CACNB3-209ENST00000548860 TMLHEQ9NVH6 421 aa14.24□□□□□ -0.13
CACNB3-209ENST00000548860 KLF11O14901 512 aa14.24□□□□□ -0.13
CACNB3-209ENST00000548860 GTF2H3Q13889 308 aa14.24□□□□□ -0.13
CACNB3-209ENST00000548860 TLR1Q15399 786 aa14.24□□□□□ -0.13
CACNB3-209ENST00000548860 CWF19L1Q69YN2 538 aaKnown RBP14.24□□□□□ -0.13
CACNB3-209ENST00000548860 CALML6Q8TD86 181 aa14.24□□□□□ -0.13
CACNB3-209ENST00000548860 PNPLA8Q9NP80 782 aa14.24□□□□□ -0.13
CACNB3-209ENST00000548860 TMEM30AQ9NV96 361 aa14.24□□□□□ -0.13
CACNB3-209ENST00000548860 NDUFAF1Q9Y375 327 aa14.24□□□□□ -0.13
CACNB3-209ENST00000548860 E9PAM4 449 aa14.24□□□□□ -0.13
CACNB3-209ENST00000548860 PTGESO14684 152 aa14.24□□□□□ -0.13
CACNB3-209ENST00000548860 SYNCRIPO60506 623 aaKnown RBP14.24□□□□□ -0.13
CACNB3-209ENST00000548860 MRNIPQ6NTE8 343 aa14.24□□□□□ -0.13
CACNB3-209ENST00000548860 STK32CQ86UX6 486 aa14.24□□□□□ -0.13
CACNB3-209ENST00000548860 CANT1Q8WVQ1 401 aa14.24□□□□□ -0.13
CACNB3-209ENST00000548860 HAUS8Q9BT25 410 aa14.24□□□□□ -0.13
CACNB3-209ENST00000548860 TRMT13Q9NUP7 481 aaKnown RBP14.24□□□□□ -0.13
CACNB3-209ENST00000548860 PNMA8BQ9ULN7 279 aaPredicted RBP14.24□□□□□ -0.13
CACNB3-209ENST00000548860 MYADML2A6NDP7 307 aa14.23□□□□□ -0.13
CACNB3-209ENST00000548860 IQCF5A8MTL0 148 aa14.23□□□□□ -0.13
CACNB3-209ENST00000548860 GPR182O15218 404 aa14.23□□□□□ -0.13
CACNB3-209ENST00000548860 SNNO75324 88 aaPredicted RBP14.23□□□□□ -0.13
CACNB3-209ENST00000548860 PTPRRQ15256 657 aa14.23□□□□□ -0.13
CACNB3-209ENST00000548860 NADK2Q4G0N4 442 aa14.23□□□□□ -0.13
CACNB3-209ENST00000548860 LDLRAP1Q5SW96 308 aa14.23□□□□□ -0.13
CACNB3-209ENST00000548860 EPGNQ6UW88 154 aa14.23□□□□□ -0.13
CACNB3-209ENST00000548860 ZYG11AQ6WRX3 759 aa14.23□□□□□ -0.13
CACNB3-209ENST00000548860 TSPAN14Q8NG11 270 aa14.23□□□□□ -0.13
CACNB3-209ENST00000548860 ANKRD27Q96NW4 1050 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms