RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 FSTL5Q8N475 847 aaPredicted RBP20.53■□□□□ 0.88
SSH1-207ENST00000547862 ARL10Q8N8L6 244 aa20.53■□□□□ 0.88
SSH1-207ENST00000547862 PDXPQ96GD0 296 aa20.53■□□□□ 0.88
SSH1-207ENST00000547862 CPEB1Q9BZB8 566 aaKnown RBP20.53■□□□□ 0.88
SSH1-207ENST00000547862 EDEM3Q9BZQ6 932 aa20.53■□□□□ 0.88
SSH1-207ENST00000547862 PDFQ9HBH1 243 aa20.53■□□□□ 0.88
SSH1-207ENST00000547862 TAS2R14Q9NYV8 317 aa20.53■□□□□ 0.88
SSH1-207ENST00000547862 LIMA1Q9UHB6 759 aaKnown RBP20.53■□□□□ 0.88
SSH1-207ENST00000547862 RABGEF1Q9UJ41 708 aa20.53■□□□□ 0.88
SSH1-207ENST00000547862 GPR34Q9UPC5 381 aa20.53■□□□□ 0.88
SSH1-207ENST00000547862 WASH4PA8MWX3 477 aa20.52■□□□□ 0.88
SSH1-207ENST00000547862 ERVH48-1M5A8F1 160 aa20.52■□□□□ 0.88
SSH1-207ENST00000547862 EEF2KO00418 725 aaKnown RBP20.52■□□□□ 0.88
SSH1-207ENST00000547862 TNFSF15O95150 251 aa20.52■□□□□ 0.88
SSH1-207ENST00000547862 ALPIP09923 528 aa20.52■□□□□ 0.88
SSH1-207ENST00000547862 MMP12P39900 470 aa20.52■□□□□ 0.88
SSH1-207ENST00000547862 RGRP47804 291 aa20.52■□□□□ 0.88
SSH1-207ENST00000547862 INPP5AQ14642 412 aa20.52■□□□□ 0.88
SSH1-207ENST00000547862 STX1AQ16623 288 aa20.52■□□□□ 0.88
SSH1-207ENST00000547862 CA9Q16790 459 aa20.52■□□□□ 0.88
SSH1-207ENST00000547862 UGP2Q16851 508 aa20.52■□□□□ 0.88
SSH1-207ENST00000547862 ZSCAN23Q3MJ62 389 aa20.52■□□□□ 0.88
SSH1-207ENST00000547862 KCTD16Q68DU8 428 aa20.52■□□□□ 0.88
SSH1-207ENST00000547862 MCOLN2Q8IZK6 566 aa20.52■□□□□ 0.88
SSH1-207ENST00000547862 UMODL1-AS1Q8N2C9 162 aa20.52■□□□□ 0.88
SSH1-207ENST00000547862 WDR36Q8NI36 951 aaKnown RBP20.52■□□□□ 0.88
SSH1-207ENST00000547862 TBATAQ96M53 351 aa20.52■□□□□ 0.88
SSH1-207ENST00000547862 APOOQ9BUR5 198 aa20.52■□□□□ 0.88
SSH1-207ENST00000547862 FOXP3Q9BZS1 431 aa20.52■□□□□ 0.88
SSH1-207ENST00000547862 LRRC19Q9H756 370 aa20.52■□□□□ 0.88
SSH1-207ENST00000547862 SP110Q9HB58 689 aa20.52■□□□□ 0.88
SSH1-207ENST00000547862 PCSK1NQ9UHG2 260 aa20.52■□□□□ 0.88
SSH1-207ENST00000547862 ATP8A1Q9Y2Q0 1164 aa20.52■□□□□ 0.88
SSH1-207ENST00000547862 SCN8AQ9UQD0 1980 aa20.52■□□□□ 0.87
SSH1-207ENST00000547862 CCDC187A0A096LP49 1063 aa20.51■□□□□ 0.87
SSH1-207ENST00000547862 TSPAN11A1L157 253 aa20.51■□□□□ 0.87
SSH1-207ENST00000547862 ARHGAP42A6NI28 874 aa20.51■□□□□ 0.87
SSH1-207ENST00000547862 DFFAO00273 331 aa20.51■□□□□ 0.87
SSH1-207ENST00000547862 TOR1BO14657 336 aa20.51■□□□□ 0.87
SSH1-207ENST00000547862 RIOK3O14730 519 aaKnown RBP20.51■□□□□ 0.87
SSH1-207ENST00000547862 DAPK3O43293 454 aa20.51■□□□□ 0.87
SSH1-207ENST00000547862 BUB1BO60566 1050 aaPredicted RBP20.51■□□□□ 0.87
SSH1-207ENST00000547862 PRAMEF11O60813 436 aa20.51■□□□□ 0.87
SSH1-207ENST00000547862 PAPOLAP51003 745 aaKnown RBP20.51■□□□□ 0.87
SSH1-207ENST00000547862 AIF1P55008 147 aa20.51■□□□□ 0.87
SSH1-207ENST00000547862 SRP54P61011 504 aaKnown RBP20.51■□□□□ 0.87
SSH1-207ENST00000547862 PPP1R15BQ5SWA1 713 aa20.51■□□□□ 0.87
SSH1-207ENST00000547862 ACAD10Q6JQN1 1059 aa20.51■□□□□ 0.87
SSH1-207ENST00000547862 B3GNT8Q7Z7M8 397 aa20.51■□□□□ 0.87
SSH1-207ENST00000547862 GKN2Q86XP6 184 aa20.51■□□□□ 0.87
SSH1-207ENST00000547862 JAMLQ86YT9 394 aa20.51■□□□□ 0.87
SSH1-207ENST00000547862 ARL14Q8N4G2 192 aa20.51■□□□□ 0.87
SSH1-207ENST00000547862 PLA2G15Q8NCC3 412 aa20.51■□□□□ 0.87
SSH1-207ENST00000547862 SCG3Q8WXD2 468 aaKnown RBP20.51■□□□□ 0.87
SSH1-207ENST00000547862 PRR11Q96HE9 360 aaPredicted RBP20.51■□□□□ 0.87
SSH1-207ENST00000547862 WDR92Q96MX6 357 aa20.51■□□□□ 0.87
SSH1-207ENST00000547862 SLC46A1Q96NT5 459 aa20.51■□□□□ 0.87
SSH1-207ENST00000547862 GFM1Q96RP9 751 aaKnown RBP20.51■□□□□ 0.87
SSH1-207ENST00000547862 SNRNP25Q9BV90 132 aaKnown RBP20.51■□□□□ 0.87
SSH1-207ENST00000547862 CINPQ9BW66 212 aaPredicted RBP20.51■□□□□ 0.87
SSH1-207ENST00000547862 DPH1Q9BZG8 443 aa20.51■□□□□ 0.87
SSH1-207ENST00000547862 SLC39A8Q9C0K1 460 aa20.51■□□□□ 0.87
SSH1-207ENST00000547862 SUDS3Q9H7L9 328 aaPredicted RBP20.51■□□□□ 0.87
SSH1-207ENST00000547862 ANO10Q9NW15 660 aa20.51■□□□□ 0.87
SSH1-207ENST00000547862 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.51■□□□□ 0.87
SSH1-207ENST00000547862 PCDHGA8Q9Y5G5 932 aa20.51■□□□□ 0.87
SSH1-207ENST00000547862 PALMO75781 387 aa20.5■□□□□ 0.87
SSH1-207ENST00000547862 RPLP0P05388 317 aaKnown RBP20.5■□□□□ 0.87
SSH1-207ENST00000547862 PLA2G2AP14555 144 aa20.5■□□□□ 0.87
SSH1-207ENST00000547862 FERP16591 822 aa20.5■□□□□ 0.87
SSH1-207ENST00000547862 SERPINA4P29622 427 aa20.5■□□□□ 0.87
SSH1-207ENST00000547862 SUOXP51687 545 aa20.5■□□□□ 0.87
SSH1-207ENST00000547862 CCL7P80098 99 aa20.5■□□□□ 0.87
SSH1-207ENST00000547862 RHDQ02161 417 aa20.5■□□□□ 0.87
SSH1-207ENST00000547862 VAC14Q08AM6 782 aa20.5■□□□□ 0.87
SSH1-207ENST00000547862 LY6DQ14210 128 aa20.5■□□□□ 0.87
SSH1-207ENST00000547862 GRM3Q14832 879 aa20.5■□□□□ 0.87
SSH1-207ENST00000547862 KIAA1614Q5VZ46 1190 aa20.5■□□□□ 0.87
SSH1-207ENST00000547862 BRAT1Q6PJG6 821 aa20.5■□□□□ 0.87
SSH1-207ENST00000547862 ARHGAP36Q6ZRI8 547 aa20.5■□□□□ 0.87
SSH1-207ENST00000547862 ZNF605Q86T29 641 aa20.5■□□□□ 0.87
SSH1-207ENST00000547862 TSEN2Q8NCE0 465 aaKnown RBP20.5■□□□□ 0.87
SSH1-207ENST00000547862 LSM14AQ8ND56 463 aaKnown RBP20.5■□□□□ 0.87
SSH1-207ENST00000547862 WDR48Q8TAF3 677 aa20.5■□□□□ 0.87
SSH1-207ENST00000547862 ERGIC2Q96RQ1 377 aa20.5■□□□□ 0.87
SSH1-207ENST00000547862 PEBP4Q96S96 227 aa20.5■□□□□ 0.87
SSH1-207ENST00000547862 KCTD15Q96SI1 283 aaPredicted RBP20.5■□□□□ 0.87
SSH1-207ENST00000547862 ATP13A3Q9H7F0 1226 aa20.5■□□□□ 0.87
SSH1-207ENST00000547862 MOSPD1Q9UJG1 213 aa20.5■□□□□ 0.87
SSH1-207ENST00000547862 TMEM110-MUSTN1A8MSY1 372 aa20.49■□□□□ 0.87
SSH1-207ENST00000547862 A8MX80 341 aa20.49■□□□□ 0.87
SSH1-207ENST00000547862 B4DGG1 531 aa20.49■□□□□ 0.87
SSH1-207ENST00000547862 D6RAR5 112 aa20.49■□□□□ 0.87
SSH1-207ENST00000547862 ELFN1P0C7U0 828 aa20.49■□□□□ 0.87
SSH1-207ENST00000547862 HGFP14210 728 aa20.49■□□□□ 0.87
SSH1-207ENST00000547862 TNFAIP3P21580 790 aa20.49■□□□□ 0.87
SSH1-207ENST00000547862 PEX5P50542 639 aa20.49■□□□□ 0.87
SSH1-207ENST00000547862 NDST2P52849 883 aa20.49■□□□□ 0.87
SSH1-207ENST00000547862 PPP6R3Q5H9R7 873 aaPredicted RBP20.49■□□□□ 0.87
SSH1-207ENST00000547862 IGF2-ASQ6U949 168 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms