RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 TSTD2Q5T7W7 516 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 SDCCAG8Q86SQ7 713 aaPredicted RBP12.8□□□□□ -0.36
SCAF11-209ENST00000547018 DDI1Q8WTU0 396 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 TMA16Q96EY4 203 aaKnown RBP12.8□□□□□ -0.36
SCAF11-209ENST00000547018 PTCD3Q96EY7 689 aaKnown RBP12.8□□□□□ -0.36
SCAF11-209ENST00000547018 YME1L1Q96TA2 773 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 CLSTN3Q9BQT9 956 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 ZBED2Q9BTP6 218 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 TCF7L2Q9NQB0 619 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 TAGLN3Q9UI15 199 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 PCDHB9Q9Y5E1 797 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 IQCF5A8MTL0 148 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 ZBTB14O43829 449 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 PEX11AO75192 247 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 CIB2O75838 187 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 TGDSO95455 350 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 MPOP05164 745 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 SERINC3Q13530 473 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 UGP2Q16851 508 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 CCDC153Q494R4 210 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 STXBP5Q5T5C0 1151 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 ZNF697Q5TEC3 545 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 POTEHQ6S545 545 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 TXNDC5Q8NBS9 432 aaKnown RBP12.79□□□□□ -0.36
SCAF11-209ENST00000547018 IMP4Q96G21 291 aaKnown RBP12.79□□□□□ -0.36
SCAF11-209ENST00000547018 GPR22Q99680 433 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 VN1R3Q9BXE9 311 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 IL1RL2Q9HB29 575 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 UBA2Q9UBT2 640 aaPredicted RBP12.79□□□□□ -0.36
SCAF11-209ENST00000547018 PTGDR2Q9Y5Y4 395 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 RAD54BQ9Y620 910 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 VWA8A3KMH1 1905 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 H7C4K7 107 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 GRK2P25098 689 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 HADHAP40939 763 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 ARCN1P48444 511 aaKnown RBP12.79□□□□□ -0.36
SCAF11-209ENST00000547018 NUDT2P50583 147 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 CDKN2DP55273 166 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 KDELC1Q6UW63 502 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 DNAJB7Q7Z6W7 309 aaPredicted RBP12.79□□□□□ -0.36
SCAF11-209ENST00000547018 UMODL1-AS1Q8N2C9 162 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 LRRC43Q8N309 656 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 FAM156AQ8NDB6 213 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 LENG8Q96PV6 779 aaPredicted RBP12.79□□□□□ -0.36
SCAF11-209ENST00000547018 HBEGFQ99075 208 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 CCDC68Q9H2F9 335 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 ZNF840PA6NDX5 716 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 CCND1P24385 295 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 KCNC1P48547 511 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 CDH18Q13634 790 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 POM121L1PQ3SYA9 428 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 HECTD2Q5U5R9 776 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 TRIM67Q6ZTA4 783 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 SNX32Q86XE0 403 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 OR13J1Q8NGT2 312 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 UBE2OQ9C0C9 1292 aaKnown RBP12.79□□□□□ -0.36
SCAF11-209ENST00000547018 TNKS2Q9H2K2 1166 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 SCUBE2Q9NQ36 999 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 TMEM248Q9NWD8 314 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 NCKIPSDQ9NZQ3 722 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 SPO11Q9Y5K1 396 aa12.79□□□□□ -0.36
SCAF11-209ENST00000547018 DNAH14Q0VDD8 3507 aa12.78□□□□□ -0.36
SCAF11-209ENST00000547018 MYO16Q9Y6X6 1858 aa12.78□□□□□ -0.36
SCAF11-209ENST00000547018 STX16-NPEPL1H3BU86 382 aa12.78□□□□□ -0.36
SCAF11-209ENST00000547018 PSMD3O43242 534 aa12.78□□□□□ -0.36
SCAF11-209ENST00000547018 GLP2RO95838 553 aa12.78□□□□□ -0.36
SCAF11-209ENST00000547018 PEX11BO96011 259 aa12.78□□□□□ -0.36
SCAF11-209ENST00000547018 MMP2P08253 660 aa12.78□□□□□ -0.36
SCAF11-209ENST00000547018 ALPIP09923 528 aa12.78□□□□□ -0.36
SCAF11-209ENST00000547018 MYL4P12829 197 aa12.78□□□□□ -0.36
SCAF11-209ENST00000547018 GFAPP14136 432 aa12.78□□□□□ -0.36
SCAF11-209ENST00000547018 MAP2K2P36507 400 aa12.78□□□□□ -0.36
SCAF11-209ENST00000547018 PFKFB4Q16877 469 aa12.78□□□□□ -0.36
SCAF11-209ENST00000547018 SEL1L3Q68CR1 1132 aa12.78□□□□□ -0.36
SCAF11-209ENST00000547018 GLT6D1Q7Z4J2 308 aa12.78□□□□□ -0.36
SCAF11-209ENST00000547018 HPS6Q86YV9 775 aa12.78□□□□□ -0.36
SCAF11-209ENST00000547018 SCUBE1Q8IWY4 988 aa12.78□□□□□ -0.36
SCAF11-209ENST00000547018 SUGP1Q8IWZ8 645 aaKnown RBP12.78□□□□□ -0.36
SCAF11-209ENST00000547018 INPP5DQ92835 1189 aa12.78□□□□□ -0.36
SCAF11-209ENST00000547018 IGSF21Q96ID5 467 aa12.78□□□□□ -0.36
SCAF11-209ENST00000547018 PRDM16Q9HAZ2 1276 aa12.78□□□□□ -0.36
SCAF11-209ENST00000547018 SSX2IPQ9Y2D8 614 aa12.78□□□□□ -0.36
SCAF11-209ENST00000547018 VWA7Q9Y334 891 aa12.78□□□□□ -0.36
SCAF11-209ENST00000547018 KLF11O14901 512 aa12.78□□□□□ -0.36
SCAF11-209ENST00000547018 ADRA1AP35348 466 aa12.78□□□□□ -0.36
SCAF11-209ENST00000547018 COPAP53621 1224 aa12.78□□□□□ -0.36
SCAF11-209ENST00000547018 PDAP1Q13442 181 aaKnown RBP12.78□□□□□ -0.36
SCAF11-209ENST00000547018 FAM83EQ2M2I3 478 aa12.78□□□□□ -0.36
SCAF11-209ENST00000547018 LSM12Q3MHD2 195 aaKnown RBP12.78□□□□□ -0.36
SCAF11-209ENST00000547018 FRMD7Q6ZUT3 714 aa12.78□□□□□ -0.36
SCAF11-209ENST00000547018 ARRDC2Q8TBH0 407 aa12.78□□□□□ -0.36
SCAF11-209ENST00000547018 ZNF398Q8TD17 642 aa12.78□□□□□ -0.36
SCAF11-209ENST00000547018 NSMCE3Q96MG7 304 aa12.78□□□□□ -0.36
SCAF11-209ENST00000547018 CDH19Q9H159 772 aa12.78□□□□□ -0.36
SCAF11-209ENST00000547018 OXSMQ9NWU1 459 aa12.78□□□□□ -0.36
SCAF11-209ENST00000547018 F5P12259 2224 aa12.78□□□□□ -0.36
SCAF11-209ENST00000547018 ATG2BQ96BY7 2078 aa12.77□□□□□ -0.36
SCAF11-209ENST00000547018 CD3EAPO15446 510 aaKnown RBP12.77□□□□□ -0.36
SCAF11-209ENST00000547018 OR1I1O60431 355 aa12.77□□□□□ -0.36
SCAF11-209ENST00000547018 RHOBTB1O94844 696 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms