RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 CHURC1-FNTBB4DL54 471 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 KCNK3O14649 394 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 TIMM44O43615 452 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 CST8O60676 142 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 PRAMEF11O60813 436 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 ZMPSTE24O75844 475 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 TMCC1O94876 653 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 KLF8O95600 359 aaPredicted RBP6.44□□□□□ -1.38
PRKDC-211ENST00000546304 ATP1A1P05023 1023 aaKnown RBP6.44□□□□□ -1.38
PRKDC-211ENST00000546304 SRPRAP08240 638 aaKnown RBP6.44□□□□□ -1.38
PRKDC-211ENST00000546304 PYGMP11217 842 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 HOXB2P14652 356 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 HNRNPLP14866 589 aaKnown RBP eCLIP6.44□□□□□ -1.38
PRKDC-211ENST00000546304 PECAM1P16284 738 aaPredicted RBP6.44□□□□□ -1.38
PRKDC-211ENST00000546304 ZFXP17010 805 aaPredicted RBP6.44□□□□□ -1.38
PRKDC-211ENST00000546304 TGM2P21980 687 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 PRKCHP24723 683 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 NTSR1P30989 418 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 GARSP41250 739 aaKnown RBP6.44□□□□□ -1.38
PRKDC-211ENST00000546304 IL12RB1P42701 662 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 PAPOLAP51003 745 aaKnown RBP6.44□□□□□ -1.38
PRKDC-211ENST00000546304 CLCN5P51795 746 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 GEMIN4P57678 1058 aaKnown RBP6.44□□□□□ -1.38
PRKDC-211ENST00000546304 ST8SIA6P61647 398 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 GNG11P61952 73 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 MRPS21P82921 87 aaKnown RBP6.44□□□□□ -1.38
PRKDC-211ENST00000546304 ADCY2Q08462 1091 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 MTAPQ13126 283 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 FZD5Q13467 585 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 ENPP2Q13822 863 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 STARD3Q14849 445 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 PPM1JQ5JR12 505 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 ZBTB37Q5TC79 503 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 CCDC181Q5TID7 509 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 EMC10Q5UCC4 262 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 RETSATQ6NUM9 610 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 AADACL2Q6P093 401 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 C22orf39Q6P5X5 142 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 ARHGAP36Q6ZRI8 547 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 BMP8AQ7Z5Y6 402 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 TP53INP2Q8IXH6 220 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 CCDC33Q8N5R6 958 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 TMEM105Q8N8V8 129 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 KDM1BQ8NB78 822 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 TXNDC5Q8NBS9 432 aaKnown RBP6.44□□□□□ -1.38
PRKDC-211ENST00000546304 NETO2Q8NC67 525 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 GAL3ST3Q96A11 431 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 HAUS1Q96CS2 278 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 HDAC11Q96DB2 347 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 RPL10LQ96L21 214 aaKnown RBP6.44□□□□□ -1.38
PRKDC-211ENST00000546304 MRGPRX3Q96LB0 322 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 OLFM3Q96PB7 478 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 WDR24Q96S15 920 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 ACOX2Q99424 681 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 GABRG3Q99928 467 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 DUSP23Q9BVJ7 150 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 HEMGNQ9BXL5 484 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 MAK16Q9BXY0 300 aaKnown RBP6.44□□□□□ -1.38
PRKDC-211ENST00000546304 SLC39A8Q9C0K1 460 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 TMEM245Q9H330 911 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 LMAN1LQ9HAT1 526 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 PDFQ9HBH1 243 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 DLGAP2Q9P1A6 1054 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 THAP10Q9P2Z0 257 aaPredicted RBP6.44□□□□□ -1.38
PRKDC-211ENST00000546304 UBA2Q9UBT2 640 aaPredicted RBP6.44□□□□□ -1.38
PRKDC-211ENST00000546304 ZC3H7BQ9UGR2 993 aaKnown RBP6.44□□□□□ -1.38
PRKDC-211ENST00000546304 IPO11Q9UI26 975 aaKnown RBP6.44□□□□□ -1.38
PRKDC-211ENST00000546304 MMP17Q9ULZ9 603 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 HPCAL4Q9UM19 191 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 PLA2G4CQ9UP65 541 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 ERVW-1Q9UQF0 538 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 EFR3BQ9Y2G0 817 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 HEY1Q9Y5J3 304 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 RAD54BQ9Y620 910 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 LAMA1P25391 3075 aa6.44□□□□□ -1.38
PRKDC-211ENST00000546304 EDDM13A0A1B0GTR0 161 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 J3KR12 359 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 APOC4-APOC2K7ER74 178 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 SGK1O00141 431 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 PPP1R12AO14974 1030 aaPredicted RBP6.43□□□□□ -1.38
PRKDC-211ENST00000546304 MCF2LO15068 1137 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 PI15O43692 258 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 KDELR3O43731 214 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 ATG13O75143 517 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 TJP3O95049 919 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 MT-CO1P00395 513 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 APOC2P02655 101 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 EPHX1P07099 455 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 SRCP12931 536 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 HLA-EP13747 358 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 CXCR5P32302 372 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 NNMTP40261 264 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 WASP42768 502 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 NR2C2P49116 596 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 CCR3P51677 355 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 IL10RBQ08334 325 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 PPIDQ08752 370 aaKnown RBP6.43□□□□□ -1.38
PRKDC-211ENST00000546304 KLF1Q13351 362 aaPredicted RBP6.43□□□□□ -1.38
PRKDC-211ENST00000546304 ELAVL3Q14576 367 aaKnown RBP6.43□□□□□ -1.38
PRKDC-211ENST00000546304 ZNF235Q14590 738 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms