RNA–Protein interactions for RNA: ENST00000546102.1

CUL3-215, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-215ENST00000546102 NKX2-8O15522 239 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 HNRNPCL1O60812 293 aaKnown RBP3.67□□□□□ -1.82
CUL3-215ENST00000546102 ERN1O75460 977 aaKnown RBP3.67□□□□□ -1.82
CUL3-215ENST00000546102 RECQL4O94761 1208 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 IPO13O94829 963 aaKnown RBP3.67□□□□□ -1.82
CUL3-215ENST00000546102 LETM1O95202 739 aaPredicted RBP3.67□□□□□ -1.82
CUL3-215ENST00000546102 TGDSO95455 350 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 YEATS4O95619 227 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 AFPP02771 609 aaKnown RBP3.67□□□□□ -1.82
CUL3-215ENST00000546102 PDHBP11177 359 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 FGFR4P22455 802 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 U2AF2P26368 475 aaKnown RBP eCLIP3.67□□□□□ -1.825e-7■■■□□ 16.8
CUL3-215ENST00000546102 HOXC13P31276 330 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 MSX2P35548 267 aaPredicted RBP3.67□□□□□ -1.82
CUL3-215ENST00000546102 PBX3P40426 434 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 SLC1A4P43007 532 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 ME1P48163 572 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 NOVP48745 357 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 ANXA11P50995 505 aaKnown RBP3.67□□□□□ -1.82
CUL3-215ENST00000546102 PPP5CP53041 499 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 NAPAP54920 295 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 RAC3P60763 192 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 RPL7AP62424 266 aaKnown RBP3.67□□□□□ -1.82
CUL3-215ENST00000546102 HSD11B2P80365 405 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 TRAF1Q13077 416 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 IKQ13123 557 aaPredicted RBP3.67□□□□□ -1.82
CUL3-215ENST00000546102 STK38Q15208 465 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 CD300EQ496F6 205 aaPredicted RBP3.67□□□□□ -1.82
CUL3-215ENST00000546102 AASDHQ4L235 1098 aaPredicted RBP3.67□□□□□ -1.82
CUL3-215ENST00000546102 CCDC183Q5T5S1 534 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 LRCH2Q5VUJ6 765 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 GRHL2Q6ISB3 625 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 TTI2Q6NXR4 508 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 CAVIN1Q6NZI2 390 aaKnown RBP3.67□□□□□ -1.82
CUL3-215ENST00000546102 TATDN1Q6P1N9 297 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 KLHL35Q6PF15 583 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 DRICH1Q6PGQ1 229 aaPredicted RBP3.67□□□□□ -1.82
CUL3-215ENST00000546102 MTHFD1LQ6UB35 978 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 IL27RAQ6UWB1 636 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 CCDC73Q6ZRK6 1079 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 TMPRSS9Q7Z410 1059 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 P3H2Q8IVL5 708 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 ELOA2Q8IYF1 753 aaPredicted RBP3.67□□□□□ -1.82
CUL3-215ENST00000546102 IZUMO1Q8IYV9 350 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 MB21D1Q8N884 522 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 ARL10Q8N8L6 244 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 AVL9Q8NBF6 648 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 GMCL1P1Q8NEA9 526 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 TNIP2Q8NFZ5 429 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 OR52N2Q8NGI0 321 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 GOT1L1Q8NHS2 421 aaPredicted RBP3.67□□□□□ -1.82
CUL3-215ENST00000546102 GABPB2Q8TAK5 448 aaPredicted RBP3.67□□□□□ -1.82
CUL3-215ENST00000546102 ATG4AQ8WYN0 398 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 OVCA2Q8WZ82 227 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 EDAQ92838 391 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 KLHL29Q96CT2 875 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 ZBED3Q96IU2 234 aaPredicted RBP3.67□□□□□ -1.82
CUL3-215ENST00000546102 PRMT6Q96LA8 375 aaPredicted RBP3.67□□□□□ -1.82
CUL3-215ENST00000546102 NAP1L5Q96NT1 182 aaPredicted RBP3.67□□□□□ -1.82
CUL3-215ENST00000546102 DPYSL5Q9BPU6 564 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.67□□□□□ -1.82
CUL3-215ENST00000546102 TMEM39BQ9GZU3 492 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 GLT8D2Q9H1C3 349 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 RABEP2Q9H5N1 569 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 DNAJC18Q9H819 358 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 KCNK9Q9NPC2 374 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 ABCF3Q9NUQ8 709 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 DDX19AQ9NUU7 478 aaKnown RBP3.67□□□□□ -1.82
CUL3-215ENST00000546102 EHD2Q9NZN4 543 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 MRPL15Q9P015 296 aaKnown RBP3.67□□□□□ -1.82
CUL3-215ENST00000546102 RNF181Q9P0P0 153 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 VPS54Q9P1Q0 977 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 HCN3Q9P1Z3 774 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 NYAP2Q9P242 653 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 MORF4L1Q9UBU8 362 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 CLIP2Q9UDT6 1046 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 MAD2L2Q9UI95 211 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 PCDHB2Q9Y5E7 798 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 PCDHAC2Q9Y5I4 1007 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 FAM169AQ9Y6X4 670 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 MYH4Q9Y623 1939 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 DOCK1Q14185 1865 aa3.67□□□□□ -1.82
CUL3-215ENST00000546102 ATAD5Q96QE3 1844 aa3.66□□□□□ -1.82
CUL3-215ENST00000546102 ESYT2A0FGR8 921 aa3.66□□□□□ -1.82
CUL3-215ENST00000546102 PMS2P1A4D2B8 440 aa3.66□□□□□ -1.82
CUL3-215ENST00000546102 ZAR1LA6NP61 321 aa3.66□□□□□ -1.82
CUL3-215ENST00000546102 MYO1GB0I1T2 1018 aa3.66□□□□□ -1.82
CUL3-215ENST00000546102 TEX22C9J3V5 150 aa3.66□□□□□ -1.82
CUL3-215ENST00000546102 E7ENX8 843 aa3.66□□□□□ -1.82
CUL3-215ENST00000546102 PER2O15055 1255 aa3.66□□□□□ -1.82
CUL3-215ENST00000546102 LDLRAD4O15165 306 aa3.66□□□□□ -1.82
CUL3-215ENST00000546102 FOXS1O43638 330 aa3.66□□□□□ -1.82
CUL3-215ENST00000546102 KINO60870 393 aaKnown RBP3.66□□□□□ -1.82
CUL3-215ENST00000546102 SEC14L2O76054 403 aa3.66□□□□□ -1.82
CUL3-215ENST00000546102 MTA2O94776 668 aa3.66□□□□□ -1.82
CUL3-215ENST00000546102 GH2P01242 217 aa3.66□□□□□ -1.82
CUL3-215ENST00000546102 ERBB2P04626 1255 aa3.66□□□□□ -1.82
CUL3-215ENST00000546102 EIF2S1P05198 315 aaKnown RBP3.66□□□□□ -1.82
CUL3-215ENST00000546102 ASNSP08243 561 aa3.66□□□□□ -1.82
CUL3-215ENST00000546102 SNHG28P0DPA3 235 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms