RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 SDC3O75056 442 aa12.63□□□□□ -0.39
ACTN1-206ENST00000544964 ATP1A1P05023 1023 aaKnown RBP12.63□□□□□ -0.39
ACTN1-206ENST00000544964 C1SP09871 688 aa12.63□□□□□ -0.39
ACTN1-206ENST00000544964 PAPOLAP51003 745 aaKnown RBP12.63□□□□□ -0.39
ACTN1-206ENST00000544964 NDST2P52849 883 aa12.63□□□□□ -0.39
ACTN1-206ENST00000544964 GBE1Q04446 702 aa12.63□□□□□ -0.39
ACTN1-206ENST00000544964 PAFAH1B3Q15102 231 aaKnown RBP12.63□□□□□ -0.39
ACTN1-206ENST00000544964 ZNF284Q2VY69 593 aa12.63□□□□□ -0.39
ACTN1-206ENST00000544964 PROX2Q3B8N5 592 aa12.63□□□□□ -0.39
ACTN1-206ENST00000544964 SETMARQ53H47 684 aaPredicted RBP12.63□□□□□ -0.39
ACTN1-206ENST00000544964 AFMIDQ63HM1 303 aa12.63□□□□□ -0.39
ACTN1-206ENST00000544964 SLC9A4Q6AI14 798 aa12.63□□□□□ -0.39
ACTN1-206ENST00000544964 C22orf39Q6P5X5 142 aa12.63□□□□□ -0.39
ACTN1-206ENST00000544964 NPNTQ6UXI9 565 aa12.63□□□□□ -0.39
ACTN1-206ENST00000544964 LINGO4Q6UY18 593 aa12.63□□□□□ -0.39
ACTN1-206ENST00000544964 LEKR1Q6ZMV7 388 aa12.63□□□□□ -0.39
ACTN1-206ENST00000544964 ARHGAP36Q6ZRI8 547 aa12.63□□□□□ -0.39
ACTN1-206ENST00000544964 VSIG1Q86XK7 387 aa12.63□□□□□ -0.39
ACTN1-206ENST00000544964 LZTR1Q8N653 840 aa12.63□□□□□ -0.39
ACTN1-206ENST00000544964 PLD5Q8N7P1 536 aa12.63□□□□□ -0.39
ACTN1-206ENST00000544964 CHST14Q8NCH0 376 aa12.63□□□□□ -0.39
ACTN1-206ENST00000544964 BBC3Q96PG8 261 aaPredicted RBP12.63□□□□□ -0.39
ACTN1-206ENST00000544964 MYOCQ99972 504 aa12.63□□□□□ -0.39
ACTN1-206ENST00000544964 C2orf49Q9BVC5 232 aaPredicted RBP12.63□□□□□ -0.39
ACTN1-206ENST00000544964 OSBPL8Q9BZF1 889 aa12.63□□□□□ -0.39
ACTN1-206ENST00000544964 DONSONQ9NYP3 566 aa12.63□□□□□ -0.39
ACTN1-206ENST00000544964 HEY1Q9Y5J3 304 aa12.63□□□□□ -0.39
ACTN1-206ENST00000544964 ACTL7AQ9Y615 435 aa12.63□□□□□ -0.39
ACTN1-206ENST00000544964 A0A1W2PQU0 124 aa12.62□□□□□ -0.39
ACTN1-206ENST00000544964 ARHGAP42A6NI28 874 aa12.62□□□□□ -0.39
ACTN1-206ENST00000544964 PRAMEF26H0Y7S4 382 aa12.62□□□□□ -0.39
ACTN1-206ENST00000544964 TRIM38O00635 465 aa12.62□□□□□ -0.39
ACTN1-206ENST00000544964 KDELR3O43731 214 aa12.62□□□□□ -0.39
ACTN1-206ENST00000544964 RNGTTO60942 597 aaKnown RBP12.62□□□□□ -0.39
ACTN1-206ENST00000544964 ZNF821O75541 412 aaPredicted RBP12.62□□□□□ -0.39
ACTN1-206ENST00000544964 ZMPSTE24O75844 475 aa12.62□□□□□ -0.39
ACTN1-206ENST00000544964 MSNP26038 577 aaKnown RBP12.62□□□□□ -0.39
ACTN1-206ENST00000544964 CHRNA3P32297 505 aa12.62□□□□□ -0.39
ACTN1-206ENST00000544964 CXCR5P32302 372 aa12.62□□□□□ -0.39
ACTN1-206ENST00000544964 SERPINB6P35237 376 aa12.62□□□□□ -0.39
ACTN1-206ENST00000544964 ETFBP38117 255 aa12.62□□□□□ -0.39
ACTN1-206ENST00000544964 CETN2P41208 172 aa12.62□□□□□ -0.39
ACTN1-206ENST00000544964 CLCN6P51797 869 aa12.62□□□□□ -0.39
ACTN1-206ENST00000544964 YBEYP58557 167 aaPredicted RBP12.62□□□□□ -0.39
ACTN1-206ENST00000544964 COPS2P61201 443 aa12.62□□□□□ -0.39
ACTN1-206ENST00000544964 SLC10A2Q12908 348 aaPredicted RBP12.62□□□□□ -0.39
ACTN1-206ENST00000544964 SERINC3Q13530 473 aa12.62□□□□□ -0.39
ACTN1-206ENST00000544964 TFDP2Q14188 446 aa12.62□□□□□ -0.39
ACTN1-206ENST00000544964 PPP2R5EQ16537 467 aa12.62□□□□□ -0.39
ACTN1-206ENST00000544964 PARP15Q460N3 678 aa12.62□□□□□ -0.39
ACTN1-206ENST00000544964 SEL1L2Q5TEA6 688 aa12.62□□□□□ -0.39
ACTN1-206ENST00000544964 ATP11CQ8NB49 1132 aa12.62□□□□□ -0.39
ACTN1-206ENST00000544964 GRIN3AQ8TCU5 1115 aa12.62□□□□□ -0.39
ACTN1-206ENST00000544964 LRRN4Q8WUT4 740 aa12.62□□□□□ -0.39
ACTN1-206ENST00000544964 HAUS1Q96CS2 278 aa12.62□□□□□ -0.39
ACTN1-206ENST00000544964 NXPE2Q96DL1 559 aa12.62□□□□□ -0.39
ACTN1-206ENST00000544964 LRIG1Q96JA1 1093 aa12.62□□□□□ -0.39
ACTN1-206ENST00000544964 WDR24Q96S15 920 aa12.62□□□□□ -0.39
ACTN1-206ENST00000544964 FZD3Q9NPG1 666 aa12.62□□□□□ -0.39
ACTN1-206ENST00000544964 SAE1Q9UBE0 346 aaPredicted RBP12.62□□□□□ -0.39
ACTN1-206ENST00000544964 ZFR2Q9UPR6 939 aaKnown RBP12.62□□□□□ -0.39
ACTN1-206ENST00000544964 JRKLQ9Y4A0 524 aa12.62□□□□□ -0.39
ACTN1-206ENST00000544964 WASF2Q9Y6W5 498 aa12.62□□□□□ -0.39
ACTN1-206ENST00000544964 J3KR12 359 aa12.61□□□□□ -0.39
ACTN1-206ENST00000544964 KPNA3O00505 521 aaPredicted RBP12.61□□□□□ -0.39
ACTN1-206ENST00000544964 SLC31A1O15431 190 aa12.61□□□□□ -0.39
ACTN1-206ENST00000544964 SIGLEC6O43699 453 aa12.61□□□□□ -0.39
ACTN1-206ENST00000544964 TLX3O43711 291 aaPredicted RBP12.61□□□□□ -0.39
ACTN1-206ENST00000544964 GIMD1P0DJR0 217 aa12.61□□□□□ -0.39
ACTN1-206ENST00000544964 CDK4P11802 303 aa12.61□□□□□ -0.39
ACTN1-206ENST00000544964 JUPP14923 745 aa12.61□□□□□ -0.39
ACTN1-206ENST00000544964 PECAM1P16284 738 aaPredicted RBP12.61□□□□□ -0.39
ACTN1-206ENST00000544964 ZFXP17010 805 aaPredicted RBP12.61□□□□□ -0.39
ACTN1-206ENST00000544964 CKMT2P17540 419 aa12.61□□□□□ -0.39
ACTN1-206ENST00000544964 ACP1P24666 158 aa12.61□□□□□ -0.39
ACTN1-206ENST00000544964 PTPN7P35236 360 aa12.61□□□□□ -0.39
ACTN1-206ENST00000544964 HNF1BP35680 557 aa12.61□□□□□ -0.39
ACTN1-206ENST00000544964 SERPINH1P50454 418 aaKnown RBP12.61□□□□□ -0.39
ACTN1-206ENST00000544964 ARF5P84085 180 aa12.61□□□□□ -0.39
ACTN1-206ENST00000544964 TARDBPQ13148 414 aaKnown RBP eCLIP12.61□□□□□ -0.39
ACTN1-206ENST00000544964 ILKQ13418 452 aa12.61□□□□□ -0.39
ACTN1-206ENST00000544964 STAT4Q14765 748 aa12.61□□□□□ -0.39
ACTN1-206ENST00000544964 TMEM259Q4ZIN3 620 aa12.61□□□□□ -0.39
ACTN1-206ENST00000544964 SEL1L3Q68CR1 1132 aa12.61□□□□□ -0.39
ACTN1-206ENST00000544964 GCNT7Q6ZNI0 430 aa12.61□□□□□ -0.39
ACTN1-206ENST00000544964 DPY19L3Q6ZPD9 716 aa12.61□□□□□ -0.39
ACTN1-206ENST00000544964 BBS12Q6ZW61 710 aa12.61□□□□□ -0.39
ACTN1-206ENST00000544964 ABI3BPQ7Z7G0 1075 aa12.61□□□□□ -0.39
ACTN1-206ENST00000544964 HORMAD1Q86X24 394 aa12.61□□□□□ -0.39
ACTN1-206ENST00000544964 SLC22A18ASQ8N1D0 253 aa12.61□□□□□ -0.39
ACTN1-206ENST00000544964 SLC25A45Q8N413 288 aa12.61□□□□□ -0.39
ACTN1-206ENST00000544964 TMIEQ8NEW7 156 aa12.61□□□□□ -0.39
ACTN1-206ENST00000544964 OR13H1Q8NG92 308 aa12.61□□□□□ -0.39
ACTN1-206ENST00000544964 UBE2Q2Q8WVN8 375 aa12.61□□□□□ -0.39
ACTN1-206ENST00000544964 KLK6Q92876 244 aa12.61□□□□□ -0.39
ACTN1-206ENST00000544964 TNKS2Q9H2K2 1166 aa12.61□□□□□ -0.39
ACTN1-206ENST00000544964 GPR27Q9NS67 375 aa12.61□□□□□ -0.39
ACTN1-206ENST00000544964 UCKL1Q9NWZ5 548 aa12.61□□□□□ -0.39
ACTN1-206ENST00000544964 DTLQ9NZJ0 730 aa12.61□□□□□ -0.39
ACTN1-206ENST00000544964 HPCAL4Q9UM19 191 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms