RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 FBXO28Q9NVF7 368 aa18.36■□□□□ 0.53
CCT4-204ENST00000544079 BFARQ9NZS9 450 aa18.36■□□□□ 0.53
CCT4-204ENST00000544079 CPSF3Q9UKF6 684 aaKnown RBP18.36■□□□□ 0.53
CCT4-204ENST00000544079 NDUFAF1Q9Y375 327 aa18.36■□□□□ 0.53
CCT4-204ENST00000544079 FAM172BPA6NC97 362 aa18.35■□□□□ 0.53
CCT4-204ENST00000544079 SNAP29O95721 258 aa18.35■□□□□ 0.53
CCT4-204ENST00000544079 HOXC6P09630 235 aa18.35■□□□□ 0.53
CCT4-204ENST00000544079 ITIH1P19827 911 aa18.35■□□□□ 0.53
CCT4-204ENST00000544079 CAP2P40123 477 aa18.35■□□□□ 0.53
CCT4-204ENST00000544079 GJA9P57773 515 aa18.35■□□□□ 0.53
CCT4-204ENST00000544079 ACTR2P61160 394 aa18.35■□□□□ 0.53
CCT4-204ENST00000544079 MTERF2Q49AM1 385 aa18.35■□□□□ 0.53
CCT4-204ENST00000544079 DCP2Q8IU60 420 aaKnown RBP18.35■□□□□ 0.53
CCT4-204ENST00000544079 SCML4Q8N228 414 aa18.35■□□□□ 0.53
CCT4-204ENST00000544079 CSPG4P5Q96PW8 444 aa18.35■□□□□ 0.53
CCT4-204ENST00000544079 ELOVL4Q9GZR5 314 aa18.35■□□□□ 0.53
CCT4-204ENST00000544079 RHOJQ9H4E5 214 aa18.35■□□□□ 0.53
CCT4-204ENST00000544079 CYP3A43Q9HB55 503 aa18.35■□□□□ 0.53
CCT4-204ENST00000544079 EML4Q9HC35 981 aaKnown RBP18.35■□□□□ 0.53
CCT4-204ENST00000544079 TESMINQ9Y4I5 508 aa18.35■□□□□ 0.53
CCT4-204ENST00000544079 SSC5DA1L4H1 1573 aa18.35■□□□□ 0.53
CCT4-204ENST00000544079 KLRG2A4D1S0 409 aaPredicted RBP18.35■□□□□ 0.53
CCT4-204ENST00000544079 TMEM233B4DJY2 109 aa18.35■□□□□ 0.53
CCT4-204ENST00000544079 B4GALT4O60513 344 aa18.35■□□□□ 0.53
CCT4-204ENST00000544079 S100BP04271 92 aaPredicted RBP18.35■□□□□ 0.53
CCT4-204ENST00000544079 GRK3P35626 688 aa18.35■□□□□ 0.53
CCT4-204ENST00000544079 PHC1P78364 1004 aa18.35■□□□□ 0.53
CCT4-204ENST00000544079 GALNT1Q10472 559 aaPredicted RBP18.35■□□□□ 0.53
CCT4-204ENST00000544079 CTF1Q16619 201 aa18.35■□□□□ 0.53
CCT4-204ENST00000544079 DGUOKQ16854 277 aa18.35■□□□□ 0.53
CCT4-204ENST00000544079 DOK7Q18PE1 504 aa18.35■□□□□ 0.53
CCT4-204ENST00000544079 BSPRYQ5W0U4 402 aa18.35■□□□□ 0.53
CCT4-204ENST00000544079 PODNQ7Z5L7 613 aa18.35■□□□□ 0.53
CCT4-204ENST00000544079 DSG4Q86SJ6 1040 aa18.35■□□□□ 0.53
CCT4-204ENST00000544079 SLCO6A1Q86UG4 719 aa18.35■□□□□ 0.53
CCT4-204ENST00000544079 LRRC49Q8IUZ0 686 aa18.35■□□□□ 0.53
CCT4-204ENST00000544079 MAGEE2Q8TD90 523 aaPredicted RBP18.35■□□□□ 0.53
CCT4-204ENST00000544079 ZFP90Q8TF47 636 aa18.35■□□□□ 0.53
CCT4-204ENST00000544079 PHF10Q8WUB8 498 aaKnown RBP18.35■□□□□ 0.53
CCT4-204ENST00000544079 TMEM143Q96AN5 459 aa18.35■□□□□ 0.53
CCT4-204ENST00000544079 HDAC11Q96DB2 347 aa18.35■□□□□ 0.53
CCT4-204ENST00000544079 ANKHQ9HCJ1 492 aa18.35■□□□□ 0.53
CCT4-204ENST00000544079 RCOR3Q9P2K3 495 aaPredicted RBP18.35■□□□□ 0.53
CCT4-204ENST00000544079 SLC39A10Q9ULF5 831 aa18.35■□□□□ 0.53
CCT4-204ENST00000544079 PSMD11O00231 422 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 LDLRP01130 860 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 HDCP19113 662 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 PSMB4P28070 264 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 RAP1GAPP47736 663 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 KPNA2P52292 529 aaKnown RBP18.34■□□□□ 0.53
CCT4-204ENST00000544079 TFAMQ00059 246 aaKnown RBP18.34■□□□□ 0.53
CCT4-204ENST00000544079 TOP3AQ13472 1001 aaPredicted RBP18.34■□□□□ 0.53
CCT4-204ENST00000544079 DNASE1L3Q13609 305 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 PLCL1Q15111 1095 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 THAP5Q7Z6K1 395 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 SLC22A16Q86VW1 577 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 KCNMB4Q86W47 210 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 GALNT13Q8IUC8 556 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 CCNYL1Q8N7R7 359 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 BEST2Q8NFU1 509 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 OR6Q1Q8NGQ2 317 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 RDH12Q96NR8 316 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 ING2Q9H160 280 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 FAM124BQ9H5Z6 455 aaPredicted RBP18.34■□□□□ 0.53
CCT4-204ENST00000544079 NECTIN3Q9NQS3 549 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 KIAA1257Q9ULG3 409 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 NOTOA8MTQ0 251 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 ASNA1O43681 348 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 SLC35E2BP0CK96 405 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 KCNA2P16389 499 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 ELK4P28324 431 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 BST2Q10589 180 aaKnown RBP18.34■□□□□ 0.53
CCT4-204ENST00000544079 GRM3Q14832 879 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 LRIT3Q3SXY7 679 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 ZNF484Q5JVG2 852 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 TSTD2Q5T7W7 516 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 TAF2Q6P1X5 1199 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 LAYNQ6UX15 382 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 ABHD15Q6UXT9 468 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 PRR23CQ6ZRP0 262 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 SLC26A9Q7LBE3 791 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 CENPLQ8N0S6 344 aaPredicted RBP18.34■□□□□ 0.53
CCT4-204ENST00000544079 CAPSLQ8WWF8 208 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 ERLEC1Q96DZ1 483 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 MUS81Q96NY9 551 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 TWNKQ96RR1 684 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 ACSS2Q9NR19 701 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 PIH1D1Q9NWS0 290 aaKnown RBP18.34■□□□□ 0.53
CCT4-204ENST00000544079 GTSE1Q9NYZ3 720 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 XPR1Q9UBH6 696 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 VANGL2Q9ULK5 521 aa18.34■□□□□ 0.53
CCT4-204ENST00000544079 TCP10L2B9ZVM9 353 aa18.33■□□□□ 0.53
CCT4-204ENST00000544079 ARPC2O15144 300 aa18.33■□□□□ 0.53
CCT4-204ENST00000544079 DYRK3O43781 588 aa18.33■□□□□ 0.53
CCT4-204ENST00000544079 GABARAPO95166 117 aa18.33■□□□□ 0.53
CCT4-204ENST00000544079 ATP5F1P24539 256 aaPredicted RBP18.33■□□□□ 0.53
CCT4-204ENST00000544079 HTR1BP28222 390 aa18.33■□□□□ 0.53
CCT4-204ENST00000544079 CD40LGP29965 261 aa18.33■□□□□ 0.53
CCT4-204ENST00000544079 KRT6CP48668 564 aa18.33■□□□□ 0.53
CCT4-204ENST00000544079 STX1BP61266 288 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms