RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 NUP62CLQ9H1M0 184 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 FAM204AQ9H8W3 233 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 PLEKHA5Q9HAU0 1116 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 SERHLQ9NQF3 203 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 SLC38A7Q9NVC3 462 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 ELOVL5Q9NYP7 299 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 PIN4Q9Y237 131 aaKnown RBP4.72□□□□□ -1.65
MDM2-228ENST00000542502 RAD54BQ9Y620 910 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 TET1Q8NFU7 2136 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 COL4A6Q14031 1691 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 QSOX1O00391 747 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 MAPK13O15264 365 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 OGTO15294 1046 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 PPM1DO15297 605 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 INPPL1O15357 1258 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 STX10O60499 249 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 TSPAN1O60635 241 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 VPS4BO75351 444 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 IL18RAPO95256 599 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 GJB5O95377 273 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 GNA14O95837 355 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 FTLP02792 175 aaPredicted RBP4.71□□□□□ -1.66
MDM2-228ENST00000542502 RB1P06400 928 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 PDHA1P08559 390 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 ARF4P18085 180 aaPredicted RBP4.71□□□□□ -1.66
MDM2-228ENST00000542502 CHRM3P20309 590 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 HTR1BP28222 390 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 HOXA11P31270 313 aaPredicted RBP4.71□□□□□ -1.66
MDM2-228ENST00000542502 PPM1AP35813 382 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 MMP13P45452 471 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 AGFG1P52594 562 aaKnown RBP4.71□□□□□ -1.66
MDM2-228ENST00000542502 AP3M2P53677 418 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 EEFSECP57772 596 aaKnown RBP4.71□□□□□ -1.66
MDM2-228ENST00000542502 WDR5P61964 334 aaKnown RBP4.71□□□□□ -1.66
MDM2-228ENST00000542502 COASYQ13057 564 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 DRP2Q13474 957 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 LAMB3Q13751 1172 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 NFIL3Q16649 462 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 KNOP1Q1ED39 458 aaKnown RBP4.71□□□□□ -1.66
MDM2-228ENST00000542502 KLHL40Q2TBA0 621 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 EDRF1Q3B7T1 1238 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 CCDC183Q5T5S1 534 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 FAM109BQ6ICB4 259 aaPredicted RBP4.71□□□□□ -1.66
MDM2-228ENST00000542502 SASS6Q6UVJ0 657 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 NPNTQ6UXI9 565 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 DTX2Q86UW9 622 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 SFR1Q86XK3 245 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 ECHDC2Q86YB7 292 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 HERC6Q8IVU3 1022 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 C12orf56Q8IXR9 622 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 FAM156AQ8NDB6 213 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 SVIPQ8NHG7 77 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 POMGNT1Q8WZA1 660 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 PMM1Q92871 262 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 DHTKD1Q96HY7 919 aaPredicted RBP4.71□□□□□ -1.66
MDM2-228ENST00000542502 YME1L1Q96TA2 773 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 STRA6Q9BX79 667 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 B3GNT5Q9BYG0 378 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 DNAI2Q9GZS0 605 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 TMEM117Q9H0C3 514 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 CLSTN2Q9H4D0 955 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 ASB7Q9H672 318 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 LMBRD1Q9NUN5 540 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 TUBA8Q9NY65 449 aaPredicted RBP4.71□□□□□ -1.66
MDM2-228ENST00000542502 DLL3Q9NYJ7 618 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 AGAP1Q9UPQ3 857 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 STXBP5LQ9Y2K9 1186 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 DERAQ9Y315 318 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 PCDHB2Q9Y5E7 798 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 STYXL1Q9Y6J8 313 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 CITO14578 2027 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 SCN5AQ14524 2016 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 UMODL1Q5DID0 1318 aa4.71□□□□□ -1.66
MDM2-228ENST00000542502 SIP14410 1827 aa4.7□□□□□ -1.66
MDM2-228ENST00000542502 A0A087WWV3 80 aa4.7□□□□□ -1.66
MDM2-228ENST00000542502 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.7□□□□□ -1.66
MDM2-228ENST00000542502 ANO9A1A5B4 782 aa4.7□□□□□ -1.66
MDM2-228ENST00000542502 LRRC14BA6NHZ5 514 aa4.7□□□□□ -1.66
MDM2-228ENST00000542502 ZNF233A6NK53 670 aa4.7□□□□□ -1.66
MDM2-228ENST00000542502 SLC16A6O15403 523 aa4.7□□□□□ -1.66
MDM2-228ENST00000542502 TRAPPC3O43617 180 aa4.7□□□□□ -1.66
MDM2-228ENST00000542502 EXTL3O43909 919 aa4.7□□□□□ -1.66
MDM2-228ENST00000542502 DNAJB5O75953 348 aa4.7□□□□□ -1.66
MDM2-228ENST00000542502 THP07101 528 aa4.7□□□□□ -1.66
MDM2-228ENST00000542502 FTH1P19P0C7X4 201 aa4.7□□□□□ -1.66
MDM2-228ENST00000542502 TRIM21P19474 475 aaKnown RBP4.7□□□□□ -1.66
MDM2-228ENST00000542502 ITGB8P26012 769 aa4.7□□□□□ -1.66
MDM2-228ENST00000542502 RPL9P32969 192 aaKnown RBP4.7□□□□□ -1.66
MDM2-228ENST00000542502 NR4A2P43354 598 aa4.7□□□□□ -1.66
MDM2-228ENST00000542502 PIK3CGP48736 1102 aa4.7□□□□□ -1.66
MDM2-228ENST00000542502 ALDH7A1P49419 539 aaKnown RBP4.7□□□□□ -1.66
MDM2-228ENST00000542502 HK3P52790 923 aa4.7□□□□□ -1.66
MDM2-228ENST00000542502 HTRA4P83105 476 aaPredicted RBP4.7□□□□□ -1.66
MDM2-228ENST00000542502 FKBP3Q00688 224 aaKnown RBP4.7□□□□□ -1.66
MDM2-228ENST00000542502 KRT17Q04695 432 aa4.7□□□□□ -1.66
MDM2-228ENST00000542502 UBE3AQ05086 875 aa4.7□□□□□ -1.66
MDM2-228ENST00000542502 RNASELQ05823 741 aaKnown RBP4.7□□□□□ -1.66
MDM2-228ENST00000542502 CETN1Q12798 172 aa4.7□□□□□ -1.66
MDM2-228ENST00000542502 ELAVL2Q12926 359 aaKnown RBP4.7□□□□□ -1.66
MDM2-228ENST00000542502 CUL4BQ13620 913 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms