RNA–Protein interactions for RNA: ENST00000542484.1

C2CD3-218, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-218ENST00000542484 C10orf25Q5T742 122 aa4.7□□□□□ -1.66
C2CD3-218ENST00000542484 CCDC121Q6ZUS5 278 aa4.7□□□□□ -1.66
C2CD3-218ENST00000542484 RNF144BQ7Z419 303 aa4.7□□□□□ -1.66
C2CD3-218ENST00000542484 CTAGE6Q86UF2 777 aa4.7□□□□□ -1.66
C2CD3-218ENST00000542484 LCA5Q86VQ0 697 aa4.7□□□□□ -1.66
C2CD3-218ENST00000542484 BRSK2Q8IWQ3 736 aa4.7□□□□□ -1.66
C2CD3-218ENST00000542484 CTAGE4Q8IX94 777 aa4.7□□□□□ -1.66
C2CD3-218ENST00000542484 CCDC13Q8IYE1 715 aa4.7□□□□□ -1.66
C2CD3-218ENST00000542484 ADGRF4Q8IZF3 695 aa4.7□□□□□ -1.66
C2CD3-218ENST00000542484 RASSF8Q8NHQ8 419 aa4.7□□□□□ -1.66
C2CD3-218ENST00000542484 KAT2AQ92830 837 aa4.7□□□□□ -1.66
C2CD3-218ENST00000542484 COQ8BQ96D53 544 aa4.7□□□□□ -1.66
C2CD3-218ENST00000542484 TBATAQ96M53 351 aa4.7□□□□□ -1.66
C2CD3-218ENST00000542484 CFAP53Q96M91 514 aa4.7□□□□□ -1.66
C2CD3-218ENST00000542484 RUFY1Q96T51 708 aa4.7□□□□□ -1.66
C2CD3-218ENST00000542484 TUBB6Q9BUF5 446 aa4.7□□□□□ -1.66
C2CD3-218ENST00000542484 FRMD8Q9BZ67 464 aaPredicted RBP4.7□□□□□ -1.66
C2CD3-218ENST00000542484 ZWILCHQ9H900 591 aa4.7□□□□□ -1.66
C2CD3-218ENST00000542484 Q9N2J8 555 aa4.7□□□□□ -1.66
C2CD3-218ENST00000542484 TMEM184CQ9NVA4 438 aa4.7□□□□□ -1.66
C2CD3-218ENST00000542484 TMEM45AQ9NWC5 275 aa4.7□□□□□ -1.66
C2CD3-218ENST00000542484 FBXO4Q9UKT5 387 aa4.7□□□□□ -1.66
C2CD3-218ENST00000542484 HPCAL4Q9UM19 191 aa4.7□□□□□ -1.66
C2CD3-218ENST00000542484 PPP2R2CQ9Y2T4 447 aa4.7□□□□□ -1.66
C2CD3-218ENST00000542484 C15orf41Q9Y2V0 281 aa4.7□□□□□ -1.66
C2CD3-218ENST00000542484 GMEB1Q9Y692 573 aa4.7□□□□□ -1.66
C2CD3-218ENST00000542484 KDM5AP29375 1690 aaKnown RBP4.7□□□□□ -1.66
C2CD3-218ENST00000542484 HECW2Q9P2P5 1572 aa4.7□□□□□ -1.66
C2CD3-218ENST00000542484 ZMYM2Q9UBW7 1377 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 EFCAB6Q5THR3 1501 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 TRBV5-3A0A0A0MS03 114 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 TARSL2A2RTX5 802 aaKnown RBP4.69□□□□□ -1.66
C2CD3-218ENST00000542484 LRRD1A4D1F6 860 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 TMEM247A6NEH6 219 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 CXorf65A6NEN9 183 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 LRRIQ3A6PVS8 624 aaPredicted RBP4.69□□□□□ -1.66
C2CD3-218ENST00000542484 C17orf100A8MU93 164 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 B4DLN1 442 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 SYN3O14994 580 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 MSI1O43347 362 aaKnown RBP4.69□□□□□ -1.66
C2CD3-218ENST00000542484 TLX3O43711 291 aaPredicted RBP4.69□□□□□ -1.66
C2CD3-218ENST00000542484 CEP104O60308 925 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 NFATC1O95644 943 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 HLA-DQA2P01906 255 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 LCKP06239 509 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 RPSAP08865 295 aaKnown RBP4.69□□□□□ -1.66
C2CD3-218ENST00000542484 GHRP10912 638 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 EPB41P11171 864 aaKnown RBP4.69□□□□□ -1.66
C2CD3-218ENST00000542484 PDHBP11177 359 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 CPA1P15085 419 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 CNTFP26441 200 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 VAMP2P63027 116 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 ZBED6P86452 979 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 SRSF1Q07955 248 aaKnown RBP eCLIP4.69□□□□□ -1.66
C2CD3-218ENST00000542484 XRCC4Q13426 336 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 PRPF4BQ13523 1007 aaKnown RBP4.69□□□□□ -1.66
C2CD3-218ENST00000542484 TAF7Q15545 349 aaPredicted RBP4.69□□□□□ -1.66
C2CD3-218ENST00000542484 MIDNQ504T8 468 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 LACTB2Q53H82 288 aaPredicted RBP4.69□□□□□ -1.66
C2CD3-218ENST00000542484 MFSD4BQ5TF39 518 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 SFMBT2Q5VUG0 894 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 ATG16L1Q676U5 607 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 AADACL2Q6P093 401 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 ZNF793Q6ZN11 406 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 CYB5R4Q7L1T6 521 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 DHX40Q8IX18 779 aaKnown RBP4.69□□□□□ -1.66
C2CD3-218ENST00000542484 DDIASQ8IXT1 998 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 RPAP2Q8IXW5 612 aaPredicted RBP4.69□□□□□ -1.66
C2CD3-218ENST00000542484 CCDC148Q8NFR7 591 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 PRSS3P2Q8NHM4 247 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 NSMCE1Q8WV22 266 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 DHX58Q96C10 678 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 TBC1D31Q96DN5 1066 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 MAELQ96JY0 434 aaKnown RBP4.69□□□□□ -1.66
C2CD3-218ENST00000542484 RPGRIP1Q96KN7 1286 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 SH3GL2Q99962 352 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 POLR3CQ9BUI4 534 aaPredicted RBP4.69□□□□□ -1.66
C2CD3-218ENST00000542484 UPF3BQ9BZI7 483 aaKnown RBP4.69□□□□□ -1.66
C2CD3-218ENST00000542484 API5Q9BZZ5 524 aaKnown RBP4.69□□□□□ -1.66
C2CD3-218ENST00000542484 YIPF3Q9GZM5 350 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 TLR8Q9NR97 1041 aaKnown RBP4.69□□□□□ -1.66
C2CD3-218ENST00000542484 GGA3Q9NZ52 723 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 SPATA7Q9P0W8 599 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 UPB1Q9UBR1 384 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 TMCO1Q9UM00 188 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 AFG3L2Q9Y4W6 797 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 IQGAP1P46940 1657 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 GRIN2DO15399 1336 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 SH3TC1Q8TE82 1336 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 NRXN1Q9ULB1 1477 aa4.69□□□□□ -1.66
C2CD3-218ENST00000542484 NSD2O96028 1365 aa4.68□□□□□ -1.66
C2CD3-218ENST00000542484 DPPA5A6NC42 116 aa4.68□□□□□ -1.66
C2CD3-218ENST00000542484 F8VZ95 297 aa4.68□□□□□ -1.66
C2CD3-218ENST00000542484 RHODO00212 210 aa4.68□□□□□ -1.66
C2CD3-218ENST00000542484 ADAM10O14672 748 aa4.68□□□□□ -1.66
C2CD3-218ENST00000542484 PRPF4O43172 522 aaKnown RBP eCLIP4.68□□□□□ -1.66
C2CD3-218ENST00000542484 KLK10O43240 276 aa4.68□□□□□ -1.66
C2CD3-218ENST00000542484 HOXC11O43248 304 aaPredicted RBP4.68□□□□□ -1.66
C2CD3-218ENST00000542484 KIF5CO60282 957 aa4.68□□□□□ -1.66
C2CD3-218ENST00000542484 UGDHO60701 494 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms