RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 INPP5AQ14642 412 aa27.03■■□□□ 1.92
CHFR-218ENST00000540963 CDO1Q16878 200 aa27.03■■□□□ 1.92
CHFR-218ENST00000540963 CCDC14Q49A88 953 aa27.03■■□□□ 1.92
CHFR-218ENST00000540963 CERCAMQ5T4B2 595 aa27.03■■□□□ 1.92
CHFR-218ENST00000540963 LEKR1Q6ZMV7 388 aa27.03■■□□□ 1.92
CHFR-218ENST00000540963 NOP9Q86U38 636 aaKnown RBP27.03■■□□□ 1.92
CHFR-218ENST00000540963 ZNF677Q86XU0 584 aa27.03■■□□□ 1.92
CHFR-218ENST00000540963 RXFP2Q8WXD0 754 aa27.03■■□□□ 1.92
CHFR-218ENST00000540963 CENPIQ92674 756 aaPredicted RBP27.03■■□□□ 1.92
CHFR-218ENST00000540963 NTAN1Q96AB6 310 aa27.03■■□□□ 1.92
CHFR-218ENST00000540963 NAA15Q9BXJ9 866 aaKnown RBP27.03■■□□□ 1.92
CHFR-218ENST00000540963 PCDHGA4Q9Y5G9 962 aa27.03■■□□□ 1.92
CHFR-218ENST00000540963 UGP2Q16851 508 aa27.02■■□□□ 1.92
CHFR-218ENST00000540963 C15orf59Q2T9L4 293 aaPredicted RBP27.02■■□□□ 1.92
CHFR-218ENST00000540963 VWA3BQ502W6 1294 aa27.02■■□□□ 1.92
CHFR-218ENST00000540963 KLHDC7AQ5VTJ3 777 aa27.02■■□□□ 1.92
CHFR-218ENST00000540963 NAA35Q5VZE5 725 aa27.02■■□□□ 1.92
CHFR-218ENST00000540963 RD3Q7Z3Z2 195 aa27.02■■□□□ 1.92
CHFR-218ENST00000540963 DTX1Q86Y01 620 aa27.02■■□□□ 1.92
CHFR-218ENST00000540963 RTL3Q8N8U3 475 aaKnown RBP27.02■■□□□ 1.92
CHFR-218ENST00000540963 EPS8L1Q8TE68 723 aa27.02■■□□□ 1.92
CHFR-218ENST00000540963 HMCESQ96FZ2 354 aa27.02■■□□□ 1.92
CHFR-218ENST00000540963 FHOD1Q9Y613 1164 aa27.02■■□□□ 1.92
CHFR-218ENST00000540963 ANKRD36A6QL64 1941 aa27.01■■□□□ 1.91
CHFR-218ENST00000540963 CFAP69A5D8W1 941 aa27.01■■□□□ 1.91
CHFR-218ENST00000540963 C2CD4BA6NLJ0 364 aa27.01■■□□□ 1.91
CHFR-218ENST00000540963 IQCJ-SCHIP1C9J366 451 aaPredicted RBP27.01■■□□□ 1.91
CHFR-218ENST00000540963 MMEP08473 750 aa27.01■■□□□ 1.91
CHFR-218ENST00000540963 MMP8P22894 467 aa27.01■■□□□ 1.91
CHFR-218ENST00000540963 CAMK4Q16566 473 aa27.01■■□□□ 1.91
CHFR-218ENST00000540963 RAB6CQ53S08 254 aa27.01■■□□□ 1.91
CHFR-218ENST00000540963 ZNF354CQ86Y25 554 aa27.01■■□□□ 1.91
CHFR-218ENST00000540963 MLKLQ8NB16 471 aa27.01■■□□□ 1.91
CHFR-218ENST00000540963 ZNF641Q96N77 438 aaPredicted RBP27.01■■□□□ 1.91
CHFR-218ENST00000540963 TRIM4Q9C037 500 aa27.01■■□□□ 1.91
CHFR-218ENST00000540963 RAB6CQ9H0N0 254 aa27.01■■□□□ 1.91
CHFR-218ENST00000540963 NOL6Q9H6R4 1146 aaKnown RBP27.01■■□□□ 1.91
CHFR-218ENST00000540963 COQ6Q9Y2Z9 468 aa27.01■■□□□ 1.91
CHFR-218ENST00000540963 PRAMEF33A0A0G2JMD5 474 aa27■■□□□ 1.91
CHFR-218ENST00000540963 PRAMEF10O60809 474 aa27■■□□□ 1.91
CHFR-218ENST00000540963 SRSF6Q13247 344 aaKnown RBP27■■□□□ 1.91
CHFR-218ENST00000540963 TPD52L1Q16890 204 aaPredicted RBP27■■□□□ 1.91
CHFR-218ENST00000540963 PARP15Q460N3 678 aa27■■□□□ 1.91
CHFR-218ENST00000540963 MIIPQ5JXC2 388 aa27■■□□□ 1.91
CHFR-218ENST00000540963 ERAP2Q6P179 960 aa27■■□□□ 1.91
CHFR-218ENST00000540963 BRAT1Q6PJG6 821 aa27■■□□□ 1.91
CHFR-218ENST00000540963 SPRED1Q7Z699 444 aa27■■□□□ 1.91
CHFR-218ENST00000540963 DNAAF5Q86Y56 855 aa27■■□□□ 1.91
CHFR-218ENST00000540963 NCAPGQ9BPX3 1015 aa27■■□□□ 1.91
CHFR-218ENST00000540963 STK33Q9BYT3 514 aa27■■□□□ 1.91
CHFR-218ENST00000540963 SUV39H2Q9H5I1 410 aa27■■□□□ 1.91
CHFR-218ENST00000540963 PCDH12Q9NPG4 1184 aa27■■□□□ 1.91
CHFR-218ENST00000540963 DAAM1Q9Y4D1 1078 aa27■■□□□ 1.91
CHFR-218ENST00000540963 OR1A2Q9Y585 309 aa27■■□□□ 1.91
CHFR-218ENST00000540963 ARHGEF17Q96PE2 2063 aaPredicted RBP26.99■■□□□ 1.91
CHFR-218ENST00000540963 NUDT21O43809 227 aaKnown RBP26.99■■□□□ 1.91
CHFR-218ENST00000540963 CYP1A1P04798 512 aaPredicted RBP26.99■■□□□ 1.91
CHFR-218ENST00000540963 HOXC4P09017 264 aaPredicted RBP26.99■■□□□ 1.91
CHFR-218ENST00000540963 FAM87AP0C7U9 286 aa26.99■■□□□ 1.91
CHFR-218ENST00000540963 UCHL3P15374 230 aa26.99■■□□□ 1.91
CHFR-218ENST00000540963 ITIH1P19827 911 aa26.99■■□□□ 1.91
CHFR-218ENST00000540963 KELP23276 732 aa26.99■■□□□ 1.91
CHFR-218ENST00000540963 HDAC4P56524 1084 aa26.99■■□□□ 1.91
CHFR-218ENST00000540963 KIAA1024LP59773 190 aa26.99■■□□□ 1.91
CHFR-218ENST00000540963 TBR1Q16650 682 aa26.99■■□□□ 1.91
CHFR-218ENST00000540963 C14orf28Q4W4Y0 310 aa26.99■■□□□ 1.91
CHFR-218ENST00000540963 TMEM164Q5U3C3 297 aa26.99■■□□□ 1.91
CHFR-218ENST00000540963 ZNF574Q6ZN55 896 aaPredicted RBP26.99■■□□□ 1.91
CHFR-218ENST00000540963 SLITRK4Q8IW52 837 aa26.99■■□□□ 1.91
CHFR-218ENST00000540963 TUBGCP2Q9BSJ2 902 aa26.99■■□□□ 1.91
CHFR-218ENST00000540963 LHX3Q9UBR4 397 aa26.99■■□□□ 1.91
CHFR-218ENST00000540963 COL12A1Q99715 3063 aa26.98■■□□□ 1.91
CHFR-218ENST00000540963 F8VZ95 297 aa26.98■■□□□ 1.91
CHFR-218ENST00000540963 TNFRSF10CO14798 259 aa26.98■■□□□ 1.91
CHFR-218ENST00000540963 PPFIA2O75334 1257 aa26.98■■□□□ 1.91
CHFR-218ENST00000540963 MMP12P39900 470 aa26.98■■□□□ 1.91
CHFR-218ENST00000540963 LIG3P49916 1009 aa26.98■■□□□ 1.91
CHFR-218ENST00000540963 SRSF1Q07955 248 aaKnown RBP eCLIP26.98■■□□□ 1.914e-6■□□□□ 8.1
CHFR-218ENST00000540963 SERINC3Q13530 473 aa26.98■■□□□ 1.91
CHFR-218ENST00000540963 HLTFQ14527 1009 aaKnown RBP eCLIP26.98■■□□□ 1.91
CHFR-218ENST00000540963 CLPPQ16740 277 aaPredicted RBP26.98■■□□□ 1.91
CHFR-218ENST00000540963 CCDC185Q8N715 623 aa26.98■■□□□ 1.91
CHFR-218ENST00000540963 FAM46DQ8NEK8 389 aa26.98■■□□□ 1.91
CHFR-218ENST00000540963 OR56A4Q8NGH8 313 aa26.98■■□□□ 1.91
CHFR-218ENST00000540963 GPT2Q8TD30 523 aa26.98■■□□□ 1.91
CHFR-218ENST00000540963 PDXPQ96GD0 296 aa26.98■■□□□ 1.91
CHFR-218ENST00000540963 TUBGCP5Q96RT8 1024 aa26.98■■□□□ 1.91
CHFR-218ENST00000540963 GEMIN8Q9NWZ8 242 aaKnown RBP26.98■■□□□ 1.91
CHFR-218ENST00000540963 AKAP7Q9P0M2 348 aaPredicted RBP26.98■■□□□ 1.91
CHFR-218ENST00000540963 LRIT1Q9P2V4 623 aa26.98■■□□□ 1.91
CHFR-218ENST00000540963 RNF215Q9Y6U7 377 aa26.98■■□□□ 1.91
CHFR-218ENST00000540963 WASH4PA8MWX3 477 aa26.97■■□□□ 1.91
CHFR-218ENST00000540963 EPHB2P29323 1055 aa26.97■■□□□ 1.91
CHFR-218ENST00000540963 UBE2HP62256 183 aa26.97■■□□□ 1.91
CHFR-218ENST00000540963 ARHGEF7Q14155 803 aa26.97■■□□□ 1.91
CHFR-218ENST00000540963 TCEA2Q15560 299 aa26.97■■□□□ 1.91
CHFR-218ENST00000540963 TAF8Q7Z7C8 310 aa26.97■■□□□ 1.91
CHFR-218ENST00000540963 SLFN11Q7Z7L1 901 aa26.97■■□□□ 1.91
CHFR-218ENST00000540963 Q8N9G6 341 aaPredicted RBP26.97■■□□□ 1.91
CHFR-218ENST00000540963 FAM172AQ8WUF8 416 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms