RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 PECAM1P16284 738 aaPredicted RBP17.01■□□□□ 0.31
CD9-209ENST00000540891 ZFXP17010 805 aaPredicted RBP17.01■□□□□ 0.31
CD9-209ENST00000540891 KCNA4P22459 653 aa17.01■□□□□ 0.31
CD9-209ENST00000540891 CTNNA1P35221 906 aaKnown RBP17.01■□□□□ 0.31
CD9-209ENST00000540891 CCT8P50990 548 aa17.01■□□□□ 0.31
CD9-209ENST00000540891 FAM193AP78312 1265 aa17.01■□□□□ 0.31
CD9-209ENST00000540891 DSC2Q02487 901 aa17.01■□□□□ 0.31
CD9-209ENST00000540891 ZBTB17Q13105 803 aa17.01■□□□□ 0.31
CD9-209ENST00000540891 SGCGQ13326 291 aa17.01■□□□□ 0.31
CD9-209ENST00000540891 ODF2Q5BJF6 829 aa17.01■□□□□ 0.31
CD9-209ENST00000540891 KYAT3Q6YP21 454 aaKnown RBP17.01■□□□□ 0.31
CD9-209ENST00000540891 NAXDQ8IW45 347 aa17.01■□□□□ 0.31
CD9-209ENST00000540891 SLC22A18ASQ8N1D0 253 aa17.01■□□□□ 0.31
CD9-209ENST00000540891 CCNYQ8ND76 341 aa17.01■□□□□ 0.31
CD9-209ENST00000540891 ARRDC2Q8TBH0 407 aa17.01■□□□□ 0.31
CD9-209ENST00000540891 CENPTQ96BT3 561 aa17.01■□□□□ 0.31
CD9-209ENST00000540891 IL12RB2Q99665 862 aa17.01■□□□□ 0.31
CD9-209ENST00000540891 POLR1EQ9GZS1 481 aaKnown RBP17.01■□□□□ 0.31
CD9-209ENST00000540891 CAAP1Q9H8G2 361 aa17.01■□□□□ 0.31
CD9-209ENST00000540891 ERVMER34-1Q9H9K5 563 aa17.01■□□□□ 0.31
CD9-209ENST00000540891 SAE1Q9UBE0 346 aaPredicted RBP17.01■□□□□ 0.31
CD9-209ENST00000540891 PCDHA3Q9Y5H8 950 aa17.01■□□□□ 0.31
CD9-209ENST00000540891 GOLGA6L6A8MZA4 724 aa17■□□□□ 0.31
CD9-209ENST00000540891 KCNK1O00180 336 aa17■□□□□ 0.31
CD9-209ENST00000540891 PCDHGA12O60330 932 aa17■□□□□ 0.31
CD9-209ENST00000540891 DFNA5O60443 496 aa17■□□□□ 0.31
CD9-209ENST00000540891 CST8O60676 142 aa17■□□□□ 0.31
CD9-209ENST00000540891 ZRANB2O95218 330 aaKnown RBP eCLIP17■□□□□ 0.31
CD9-209ENST00000540891 C6P13671 934 aa17■□□□□ 0.31
CD9-209ENST00000540891 IGFALSP35858 605 aa17■□□□□ 0.31
CD9-209ENST00000540891 RXRGP48443 463 aa17■□□□□ 0.31
CD9-209ENST00000540891 PEX5P50542 639 aa17■□□□□ 0.31
CD9-209ENST00000540891 NAP1L1P55209 391 aaKnown RBP17■□□□□ 0.31
CD9-209ENST00000540891 IFI35P80217 286 aaPredicted RBP17■□□□□ 0.31
CD9-209ENST00000540891 NIPAL4Q0D2K0 466 aa17■□□□□ 0.31
CD9-209ENST00000540891 TFDP3Q5H9I0 405 aa17■□□□□ 0.31
CD9-209ENST00000540891 N4BP2L1Q5TBK1 243 aaPredicted RBP17■□□□□ 0.31
CD9-209ENST00000540891 KAZNQ674X7 775 aa17■□□□□ 0.31
CD9-209ENST00000540891 ERAP2Q6P179 960 aa17■□□□□ 0.31
CD9-209ENST00000540891 Q6ZSR6 202 aa17■□□□□ 0.31
CD9-209ENST00000540891 B4GALNT4Q76KP1 1039 aa17■□□□□ 0.31
CD9-209ENST00000540891 DPPA4Q7L190 304 aa17■□□□□ 0.31
CD9-209ENST00000540891 NT5DC3Q86UY8 548 aa17■□□□□ 0.31
CD9-209ENST00000540891 RCOR2Q8IZ40 523 aa17■□□□□ 0.31
CD9-209ENST00000540891 CNTD1Q8N815 330 aa17■□□□□ 0.31
CD9-209ENST00000540891 TP53I13Q8NBR0 393 aaPredicted RBP17■□□□□ 0.31
CD9-209ENST00000540891 DENND6BQ8NEG7 585 aa17■□□□□ 0.31
CD9-209ENST00000540891 EXD1Q8NHP7 514 aa17■□□□□ 0.31
CD9-209ENST00000540891 ZNF830Q96NB3 372 aaPredicted RBP17■□□□□ 0.31
CD9-209ENST00000540891 HERPUD2Q9BSE4 406 aa17■□□□□ 0.31
CD9-209ENST00000540891 SLC32A1Q9H598 525 aa17■□□□□ 0.31
CD9-209ENST00000540891 MBNL1Q9NR56 388 aaKnown RBP17■□□□□ 0.31
CD9-209ENST00000540891 AMACRQ9UHK6 382 aa17■□□□□ 0.31
CD9-209ENST00000540891 PCOLCE2Q9UKZ9 415 aa17■□□□□ 0.31
CD9-209ENST00000540891 BTBD3Q9Y2F9 522 aa17■□□□□ 0.31
CD9-209ENST00000540891 COQ6Q9Y2Z9 468 aa17■□□□□ 0.31
CD9-209ENST00000540891 CNOT1A5YKK6 2376 aaKnown RBP16.99■□□□□ 0.31
CD9-209ENST00000540891 MACROD2A1Z1Q3 448 aa16.99■□□□□ 0.31
CD9-209ENST00000540891 A6NNZ2 444 aa16.99■□□□□ 0.31
CD9-209ENST00000540891 FZD6O60353 706 aa16.99■□□□□ 0.31
CD9-209ENST00000540891 MAGEC1O60732 1142 aa16.99■□□□□ 0.31
CD9-209ENST00000540891 PGLSO95336 258 aa16.99■□□□□ 0.31
CD9-209ENST00000540891 JCHAINP01591 159 aa16.99■□□□□ 0.31
CD9-209ENST00000540891 ADRB1P08588 477 aa16.99■□□□□ 0.31
CD9-209ENST00000540891 GM2AP17900 193 aa16.99■□□□□ 0.31
CD9-209ENST00000540891 CTNNA2P26232 953 aa16.99■□□□□ 0.31
CD9-209ENST00000540891 LIG3P49916 1009 aa16.99■□□□□ 0.31
CD9-209ENST00000540891 PFN3P60673 137 aa16.99■□□□□ 0.31
CD9-209ENST00000540891 KIF5AQ12840 1032 aa16.99■□□□□ 0.31
CD9-209ENST00000540891 TFDP2Q14188 446 aa16.99■□□□□ 0.31
CD9-209ENST00000540891 PDK1Q15118 436 aa16.99■□□□□ 0.31
CD9-209ENST00000540891 PPP2R5EQ16537 467 aa16.99■□□□□ 0.31
CD9-209ENST00000540891 TPRG1LQ5T0D9 272 aa16.99■□□□□ 0.31
CD9-209ENST00000540891 BAHD1Q8TBE0 780 aaPredicted RBP16.99■□□□□ 0.31
CD9-209ENST00000540891 KIAA1524Q8TCG1 905 aa16.99■□□□□ 0.31
CD9-209ENST00000540891 SAP25Q8TEE9 199 aa16.99■□□□□ 0.31
CD9-209ENST00000540891 ALG3Q92685 438 aa16.99■□□□□ 0.31
CD9-209ENST00000540891 RBM41Q96IZ5 413 aaKnown RBP16.99■□□□□ 0.31
CD9-209ENST00000540891 B4GALT6Q9UBX8 382 aa16.99■□□□□ 0.31
CD9-209ENST00000540891 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.99■□□□□ 0.31
CD9-209ENST00000540891 PCDHB9Q9Y5E1 797 aa16.99■□□□□ 0.31
CD9-209ENST00000540891 ADGRG1Q9Y653 693 aa16.99■□□□□ 0.31
CD9-209ENST00000540891 LRRK1Q38SD2 2015 aa16.98■□□□□ 0.31
CD9-209ENST00000540891 SPAARA0A1B0GVQ0 90 aa16.98■□□□□ 0.31
CD9-209ENST00000540891 A0A1W2PQ67 120 aa16.98■□□□□ 0.31
CD9-209ENST00000540891 FPGTO14772 594 aa16.98■□□□□ 0.31
CD9-209ENST00000540891 FLRT2O43155 660 aa16.98■□□□□ 0.31
CD9-209ENST00000540891 CPP00450 1065 aa16.98■□□□□ 0.31
CD9-209ENST00000540891 MMP2P08253 660 aa16.98■□□□□ 0.31
CD9-209ENST00000540891 PDHA1P08559 390 aa16.98■□□□□ 0.31
CD9-209ENST00000540891 TGM2P21980 687 aa16.98■□□□□ 0.31
CD9-209ENST00000540891 EPHA8P29322 1005 aaPredicted RBP16.98■□□□□ 0.31
CD9-209ENST00000540891 NR2C2P49116 596 aa16.98■□□□□ 0.31
CD9-209ENST00000540891 POLR2LP62875 67 aaKnown RBP16.98■□□□□ 0.31
CD9-209ENST00000540891 ITKQ08881 620 aa16.98■□□□□ 0.31
CD9-209ENST00000540891 AP1B1Q10567 949 aa16.98■□□□□ 0.31
CD9-209ENST00000540891 BNIP3Q12983 259 aa16.98■□□□□ 0.31
CD9-209ENST00000540891 AGERQ15109 404 aa16.98■□□□□ 0.31
CD9-209ENST00000540891 PTPRRQ15256 657 aa16.98■□□□□ 0.31
CD9-209ENST00000540891 WSCD2Q2TBF2 565 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms