RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 DDHD1Q8NEL9 900 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 IPMKQ8NFU5 416 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 EDEM1Q92611 657 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 FBXO32Q969P5 355 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 C12orf43Q96C57 262 aaKnown RBP5.27□□□□□ -1.57
PROM1-220ENST00000540805 TMA16Q96EY4 203 aaKnown RBP5.27□□□□□ -1.57
PROM1-220ENST00000540805 APOL2Q9BQE5 337 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 LHX5Q9H2C1 402 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 DPP3Q9NY33 737 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 UTP6Q9NYH9 597 aaKnown RBP5.27□□□□□ -1.57
PROM1-220ENST00000540805 XIRP2A4UGR9 3374 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 IGKV6-21A0A0C4DH24 114 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 ANKRD34BA5PLL1 514 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 M0QYT0 321 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 ZNF701M0R085 212 aaPredicted RBP5.27□□□□□ -1.57
PROM1-220ENST00000540805 PSMD12O00232 456 aaPredicted RBP5.27□□□□□ -1.57
PROM1-220ENST00000540805 GNGT2O14610 69 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 OGTO15294 1046 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 H2AFYO75367 372 aaKnown RBP5.27□□□□□ -1.57
PROM1-220ENST00000540805 PRKCGP05129 697 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 C8BP07358 591 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 HSPA8P11142 646 aaKnown RBP5.27□□□□□ -1.57
PROM1-220ENST00000540805 EPB42P16452 691 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 CDH8P55286 799 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 C21orf59P57076 290 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 SLC10A2Q12908 348 aaPredicted RBP5.27□□□□□ -1.57
PROM1-220ENST00000540805 DNASE1L3Q13609 305 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 PTK2BQ14289 1009 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 PDK2Q15119 407 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 PPM1JQ5JR12 505 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 SDE2Q6IQ49 451 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 METTL7BQ6UX53 244 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 MYO1HQ8N1T3 1032 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 PDZD8Q8NEN9 1154 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 GTF3C2Q8WUA4 911 aaPredicted RBP5.27□□□□□ -1.57
PROM1-220ENST00000540805 EFCAB1Q9HAE3 211 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 CAPN10Q9HC96 672 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 TUBA8Q9NY65 449 aaPredicted RBP5.27□□□□□ -1.57
PROM1-220ENST00000540805 SLC13A4Q9UKG4 626 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 AP4S1Q9Y587 144 aa5.27□□□□□ -1.57
PROM1-220ENST00000540805 TRPM7Q96QT4 1865 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 A0A0C4DFX4 3053 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 NOTOA8MTQ0 251 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 NOL3O60936 208 aaKnown RBP5.26□□□□□ -1.57
PROM1-220ENST00000540805 ALDH1A2O94788 518 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 SEC24DO94855 1032 aaPredicted RBP5.26□□□□□ -1.57
PROM1-220ENST00000540805 METTL18O95568 372 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 CLIC3O95833 236 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 GJB1P08034 283 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 DDX5P17844 614 aaKnown RBP5.26□□□□□ -1.57
PROM1-220ENST00000540805 UGT1A6P19224 532 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 UGT1A1P22309 533 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 UGT1A4P22310 534 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 ADSLP30566 484 aaPredicted RBP5.26□□□□□ -1.57
PROM1-220ENST00000540805 UGT1A3P35503 534 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 UGT1A5P35504 534 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 RAP1GAPP47736 663 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 ZNF143P52747 638 aaPredicted RBP5.26□□□□□ -1.57
PROM1-220ENST00000540805 MLLT10P55197 1068 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 RFTN1Q14699 578 aaPredicted RBP5.26□□□□□ -1.57
PROM1-220ENST00000540805 STILQ15468 1287 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 GRIK4Q16099 956 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 GOLGA7BQ2TAP0 167 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 LSM12Q3MHD2 195 aaKnown RBP5.26□□□□□ -1.57
PROM1-220ENST00000540805 ZBED5Q49AG3 693 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 SEL1L3Q68CR1 1132 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 USP50Q70EL3 339 aaPredicted RBP5.26□□□□□ -1.57
PROM1-220ENST00000540805 WDR48Q8TAF3 677 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 ADAM32Q8TC27 787 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 FAM110BQ8TC76 370 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 LRRN4Q8WUT4 740 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 LRTOMTQ8WZ04 291 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 TANKQ92844 425 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 MCRS1Q96EZ8 462 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 MAGEB10Q96LZ2 347 aaPredicted RBP5.26□□□□□ -1.57
PROM1-220ENST00000540805 CNPY3Q9BT09 278 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 ILKAPQ9H0C8 392 aaPredicted RBP5.26□□□□□ -1.57
PROM1-220ENST00000540805 HIPK3Q9H422 1215 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 WDR55Q9H6Y2 383 aaPredicted RBP5.26□□□□□ -1.57
PROM1-220ENST00000540805 MRPL40Q9NQ50 206 aaKnown RBP5.26□□□□□ -1.57
PROM1-220ENST00000540805 C20orf96Q9NUD7 363 aaPredicted RBP5.26□□□□□ -1.57
PROM1-220ENST00000540805 OLAHQ9NV23 265 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 ZNF358Q9NW07 568 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 GPATCH2LQ9NWQ4 482 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 COQ3Q9NZJ6 369 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 ADA2Q9NZK5 511 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 MID2Q9UJV3 735 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 PNMA8BQ9ULN7 279 aaPredicted RBP5.26□□□□□ -1.57
PROM1-220ENST00000540805 UBQLN1Q9UMX0 589 aaKnown RBP5.26□□□□□ -1.57
PROM1-220ENST00000540805 CLCA2Q9UQC9 943 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 SLC30A1Q9Y6M5 507 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 RALGAPA2Q2PPJ7 1873 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 SLC12A8A0AV02 714 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 STX16-NPEPL1H3BU86 382 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 ACOT8O14734 319 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 TRIM13O60858 407 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 CLASP2O75122 1294 aaKnown RBP5.26□□□□□ -1.57
PROM1-220ENST00000540805 AMHP03971 560 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 IQCF3P0C7M6 154 aa5.26□□□□□ -1.57
PROM1-220ENST00000540805 MAGP20916 626 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms